This file is indexed.

/usr/share/dialign-tx/1ajsA_ref2.degap.fasta is in dialign-tx-data 1.0.2-7.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
>1ajsA 1ajsA oo  Len:  450  Check:  6634  Weight:  1.00 450 bp 
QPwvlpvvrkveqriannsslnheylpilglaefrtcasrlalgddspalqekrvggvqs
lggtgalrigaeflarwyngtnnkdtpvyvssptwenhngvfttagfkdirsyrywdtek
rgldlqgflsdlenapefsifvlhacahnptgtdptpeqwkqiasvmkrrflfpffdsay
qgfasgnlekdawairyfvsegfelfcaqsfsknfglynervgnltvvakepdsilrvls
qmqkivrvtwsnppaqgarivartlsdpelfhewtgnvktmadrilsmrselrarlealk
tpgtwnhitdqigmfsftglnpkqveylinqkhiyllpsgrinmcglttknldyvatsih
eavtkiqx
>aatc_orysa aatc_orysa oo  Len:  450  Check:  2337  Weight:  1.00 450 bp 
KPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQC
LSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQ
GLLEDLGSAPSGAIVLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASG
SLDQDAQSVRMFVADGGELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVI
RPMYSNPPIHGASIVATILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWS
HIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKL
K
>aat1_medsa aat1_medsa oo  Len:  450  Check:  5993  Weight:  1.00 450 bp 
KPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQG
LSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQ
GLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQGFASG
SLDADAQPVRLFVADGGELLVAQSYAKNMGLYGERVGALSIVSKSADVSSRVESQLKLVI
RPMYSSPPIHGASIVAAILKDRDLYNDWTIELKAMADRIINMRQQLFDALRARGTPGDWS
HIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAIHAVVTRV
>aat4_arath aat4_arath oo  Len:  450  Check:  3150  Weight:  1.00 450 bp 
KPLVLDVVRRAEQQLANDLDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLS
GTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGM
LEDLGAAPPGAIVVLQACAHNPTGVDPTFEQWEKFRRLVRSKSLLPFFDSAYQGFASGSL
DADAQAVRMFVADGGECLIAQSYAKNMGLYGERIGSLTIVCTSEDVAKKVENQVLLVVRP
MYLTPPIHGASIVATILKNSDMYNDWTIELKGMADRIISMRQQLYAALEARGTPGDWSHI
IKHIGMFTFTGLSEEQVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVVTRI
>aat2_arath aat2_arath oo  Len:  450  Check:  4339  Weight:  1.00 450 bp 
KPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQC
LSGTGSLRVGAEFLKTHYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFK
GLLEDLGAAPSGAIVLLHACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASG
SLDTDAQSVRTFVADGGECLIAQSYTKNMGLYGERVGALSIVCKSADVASKVESQVKLVV
RPMYSSPPIHGASIVATILKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPGDWS
HIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMHAAVTRL
>aatm_human aatm_human oo  Len:  450  Check:  4961  Weight:  1.00 450 bp 
KPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTI
SGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFT
GAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASG
DGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQLKILI
RPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGSTHNWQ
HITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQVTK
>aatc_yeast aatc_yeast oo  Len:  450  Check:  6706  Weight:  1.00 450 bp 
KPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQS
LSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLN
GFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATG
DLDKDAYAVRLGVEKLsTVSpVFVCQSFAKNAGMYGERVGCFHLALTKQAQnKTIKpAVT
SQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL
GTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAI
DEVV
>aatm_chick aatm_chick oo  Len:  450  Check:  6720  Weight:  1.00 450 bp 
KSYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGI
SGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFT
GAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASG
DINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILI
RPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQ
HITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQVTK
>aat1_arath aat1_arath oo  Len:  450  Check:  9381  Weight:  1.00 450 bp 
KPVVLECVREAEKRLAGSTFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLS
GTGACRLFADFQKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSAL
MDDVKNAPEGSFFLLHACAHNPTGVDPTEEQWREISQLFKAKKHFAFFDMAYQGFASGDP
ARDAKSIRIFLEDGHHIGISQSYAKNMGLYGQRVGCLSVLCEDPKQAVAVKSQLQQLARP
MYSNPPLHGAQLVSTILEDPELKSLWLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHV
TKQIGMFCYSGLTPEQVDRLTSEYHIYMTRNGRISMAGVTTGNVGYLANAIHEVTK
>aatm_lupan aatm_lupan oo  Len:  450  Check:  7795  Weight:  1.00 450 bp 
QPYVLKVVNKAENLMLERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGL
SGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG
MIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS
LDEDAASVRLFVARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIAR
PMYSNPPVHGARIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISsKdKSGKDWS
FILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYV
S
>aatm_arath aatm_arath oo  Len:  450  Check:  6615  Weight:  1.00 450 bp 
QPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGL
SGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEG
MIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGS
LDEDAASVRLFAERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIAR
PMYSNPPVHGARIVANVVGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVsKdKSGKDWS
FILKQIGMFSFTGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV
S
>aat_haein aat_haein oo  Len:  450  Check:  4142  Weight:  1.00 450 bp 
TTPIMHAVKEAEKRLFDKEKTKNYLTIDGIADYNEQTKALLFGKDSEVIQSNRARTVQSL
GGTGALRIAAEFIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWEH
LLEDLSQASEGDVVLLHGCCHNPTGIDPTPEQWQELAALSAKNGWLPLFDFAYQGLANGL
DEDAYGLRAFAANHKELLVASSFSKNFGLYNERVGAFTLVAENAEIASTSLTQVKSIIRT
LYSNPASHGGATVATVLNDAQLRQEWENELTEMRERIKKMRHLFVQLLKEYGAEQDFSFI
IEQNGMFSFSGLTGEQVDRLKNEFAIYAVRSGRINVAGITEDNIRYLCESIVKVL
>aat_ecoli aat_ecoli oo  Len:  450  Check:  5361  Weight:  1.00 450 bp 
KTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTP
GGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA
LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGL
EEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRA
NYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI
IKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL
>tyrb_ecoli tyrb_ecoli oo  Len:  450  Check:   729  Weight:  1.00 450 bp 
IIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQT
LGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFN
DLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG
MEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVR
RNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDY
LLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM
>phhc_pseae phhc_pseae oo  Len:  450  Check:  4147  Weight:  1.00 450 bp 
LTPILRSVKLAEQRLVEQETTKSYVGGHGDALFAARLAELALGAASPLLLEQRADATQTP
GGTGALRLAGDFIAHCLPGRGIWLSDPTWPIHETLFAAAGLKVSHYPYVSADNRLDVEAM
LAGLERIPQGDVVLLHACCHNPTGFDLSHDDWRRVLDVVRRRELLPLIDFAYQGFGDGLE
EDAWAVRLFAGELPEVLVTSSCSKNFGLYRDRVGALIVCAQNAEKLTDLRSQLAFLARNL
WSTPPAHGAEVVAAILGDSELKGLWQEEVEGMRSRIASLRIGLVEALAPHGLAERFAHVG
AQRGMFSYTGLSPQQVARLRDEHAVYLVSSGRANVAGLHARRLGRLAQAIAQ
>aatm_yeast aatm_yeast oo  Len:  450  Check:  5613  Weight:  1.00 450 bp 
KVTTFPSVAKAQKLIESHLElNKnLSYLPITGSKEFQENVMKFLFKESCPQFGpFYLAHd
RISFVQTLSGTGALAVAAKFLALFISRDIWIPDPSWANHKNIFQNNGFENIYRYSYYKDG
QIDIDGWIEQLkTFAYNNQQEnNKNPPCIILHACCHNPTGLDPTKEQWEKIIDTIYELKM
VPIVDMAYQGLESGNLLKDAYLLRLCLNVNkYPNWSNgIFLCQSFAKNMGLYGERVGSLS
VITPATANnGKFNPLQQKNSLQqNIDSQLKKIVRGMYSSPPGYGSRVVNVVLSDFKLKQQ
WFKDVDFMVQRLHHVRQEMFDRLGWPDLVNFAQQHGMFYYTRFSPKQVEILRNNSFVYLT
GDGRLSLSGVNDSNVDYLCESLEAVSKMD
>atty_rhime atty_rhime oo  Len:  450  Check:    88  Weight:  1.00 450 bp 
RTPIFRAVKAAEKRLLETQDSKAYIGPEGDLVFLDRLWELVGGDTIERSHVAGVQTPGGS
GALRLAADLIARMGGRGIWLGLPSWPNHAPIFKAAGLDIATYDFFDIPSQSVIFDNLVSA
LEGAASGDAVLLHASCHNPTGGVLSEAQWMEIAALVAERGLLPLVDLAYQGFGRGLDQDV
AGLRHLLGVVPEALVAVSCSKSFGLYRERAGAIFARTSSTASADRVRSNLAGLARTSYSM
PPDHGAAVVRTILDDPELRRDWTEELETMRLRMTGLRRSLAEGLRTRWQSLGAVADQEGM
FSMLPLSEAEVMRLRTEHGIYMPASGRINIAGLKTAEAAEIAGKFTS
>2dkb 2dkb oo  Len:  450  Check:  9011  Weight:  1.00 450 bp 
hpeivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaair
maklvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfern
gaydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmll
ildeaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylf
ytthvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrgll
lgveivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidl
glsllgqaieral