/etc/mobyle/programs/Entities/penncnv_package.xml is in mobyle-programs 5.1.2-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | <package>
<name>penncnv</name>
<version>2009.08.27</version>
<doc>
<title>penncnv</title>
<description>
<text lang="en"> CNV detection from Illumina whole-genome SNP genotyping arrays.
It has been extended to handle candidate gene SNP arrays, to handle recent
high-density arrays with non-polymorphic markers (so-called CN markers),
and to handle Affymetrix genome-wide arrays.</text>
</description>
<authors>Wang K</authors>
<reference>Wang K, Li M, Hadley D, Liu R, Glessner J, Grant S, Hakonarson H, Bucan M. PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data Genome Research 17:1665-1674, 2007</reference>
<reference>Diskin SJ, Li M, Hou C, Yang S, Glessner J, Hakonarson H, Bucan M, Maris JM, Wang K. Adjustment of genomic waves in signal intensities from whole-genome SNP genotyping platforms Nucleic Acids Research 36:e126, 2008</reference>
<reference>Wang K, Chen Z, Tadesse MG, Glessner J, Grant SFA, Hakonarson H, Bucan M, Li M. Modeling genetic inheritance of copy number variations Nucleic Acids Research 36:e138, 2008</reference>
<homepagelink>http://www.openbioinformatics.org/penncnv/</homepagelink>
<sourcelink>http://www.openbioinformatics.org/penncnv/penncnv_download.html</sourcelink>
</doc>
</package>
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