/usr/share/psychtoolbox-3/Psychometric/FitNakaRushton.m is in psychtoolbox-3-common 3.0.11.20140816.dfsg1-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 | function [params,f] = FitNakaRushton(contrast,response,params0)
% [params,f] = FitNakaRushton(contrast,response,[params0])
%
% Find the parameters that best fit the data. If the initial guess
% isn't good, this can get stuck in local minima.
%
% 8/1/05 dhb, pr Wrote it.
% 8/2/07 dhb Change argument order.
% If params0 isn't passed, try to pick a good default.
if (nargin < 3 || isempty(params0))
params0(1) = max(response);
params0(2) = mean(contrast);
params0(3) = 2;
end
% Set up minimization options
options = optimset;
options = optimset(options,'Diagnostics','off','Display','off');
options = optimset(options,'LargeScale','off');
vlb = [0 0.001 0.001];
vub = [1000 100000 100];
params = fmincon('FitNakaRushtonFun',params0,[],[],[],[],vlb,vub,[],options,...
contrast,response);
f = FitNakaRushtonFun(params,contrast,response);
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