/usr/lib/R/site-library/BiocParallel/NAMESPACE is in r-bioc-biocparallel 0.6.1-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 | ## don't import(parallel), to avoid in-package name conflicts
import(methods)
importFrom(parallel, detectCores, makeCluster, nextRNGStream,
splitIndices, clusterMap)
importFrom(BiocGenerics, lapply)
if (tools:::.OStype() == "unix") {
importFrom(parallel, mccollect, mcparallel, mc.reset.stream)
}
importFrom(foreach, "%dopar%", foreach, getDoParName,
getDoParRegistered, getDoParWorkers)
importFrom(BatchJobs, getConfig, loadConfig, setConfig, makeRegistry,
batchMap, submitJobs, waitForJobs, findErrors, findDone,
loadResults, getErrorMessages, killJobs)
importFrom(BBmisc, chunk)
importFrom(tools, SIGTERM)
exportClass(BiocParallelParam, MulticoreParam, SnowParam,
DoparParam, SerialParam, BatchJobsParam)
export(MulticoreParam, SnowParam, DoparParam, SerialParam, BatchJobsParam,
bplapply, bpvec, bpvectorize, bpmapply, bpaggregate,
## bp-controls
bpworkers, bpbackend, "bpbackend<-",
bpstart, bpstop, bpisup,
## schedule
bpschedule,
## register
register, registered, bpparam,
## error handlers
bpresume, bplasterror,
## helpers
multicoreWorkers)
exportMethods(show)
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