This file is indexed.

/usr/share/vtk/Medical/Tcl/Medical1.tcl is in vtk-examples 5.8.0-17.5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
package require vtk
package require vtkinteraction

#
# This example reads a volume dataset, extracts an isosurface that
# represents the skin and displays it.
#

# Create the renderer, the render window, and the interactor. The renderer
# draws into the render window, the interactor enables mouse- and 
# keyboard-based interaction with the scene.
#
vtkRenderer aRenderer
vtkRenderWindow renWin
  renWin AddRenderer aRenderer
vtkRenderWindowInteractor iren
  iren SetRenderWindow renWin

# The following reader is used to read a series of 2D slices (images)
# that compose the volume. The slice dimensions are set, and the
# pixel spacing. The data Endianness must also be specified. The reader
# usese the FilePrefix in combination with the slice number to construct
# filenames using the format FilePrefix.%d. (In this case the FilePrefix
# is the root name of the file: quarter.)
vtkVolume16Reader v16
  v16 SetDataDimensions 64 64
  v16 SetDataByteOrderToLittleEndian 
  v16 SetFilePrefix  "$VTK_DATA_ROOT/Data/headsq/quarter"
  v16 SetImageRange 1 93
  v16 SetDataSpacing  3.2 3.2 1.5

# An isosurface, or contour value of 500 is known to correspond to the
# skin of the patient. Once generated, a vtkPolyDataNormals filter is
# is used to create normals for smooth surface shading during rendering.
# The triangle stripper is used to create triangle strips from the
# isosurface these render much faster on may systems.
vtkContourFilter skinExtractor
  skinExtractor SetInputConnection [v16 GetOutputPort]
  skinExtractor SetValue 0 500
vtkPolyDataNormals skinNormals
  skinNormals SetInputConnection [skinExtractor GetOutputPort]
  skinNormals SetFeatureAngle 60.0
vtkPolyDataMapper skinMapper
  skinMapper SetInputConnection [skinNormals GetOutputPort]
  skinMapper ScalarVisibilityOff
vtkActor skin
  skin SetMapper skinMapper

# An outline provides context around the data.
#
vtkOutlineFilter outlineData
  outlineData SetInputConnection [v16 GetOutputPort]
vtkPolyDataMapper mapOutline
  mapOutline SetInputConnection [outlineData GetOutputPort]
vtkActor outline
  outline SetMapper mapOutline
  [outline GetProperty] SetColor 0 0 0

# It is convenient to create an initial view of the data. The FocalPoint
# and Position form a vector direction. Later on (ResetCamera() method)
# this vector is used to position the camera to look at the data in
# this direction.
vtkCamera aCamera
  aCamera SetViewUp  0 0 -1
  aCamera SetPosition  0 1 0
  aCamera SetFocalPoint  0 0 0
  aCamera ComputeViewPlaneNormal

# Actors are added to the renderer. An initial camera view is created.
# The Dolly() method moves the camera towards the FocalPoint,
# thereby enlarging the image.
aRenderer AddActor outline
aRenderer AddActor skin
aRenderer SetActiveCamera aCamera
aRenderer ResetCamera 
aCamera Dolly 1.5

# Set a background color for the renderer and set the size of the
# render window (expressed in pixels).
aRenderer SetBackground 1 1 1
renWin SetSize 640 480

# Note that when camera movement occurs (as it does in the Dolly()
# method), the clipping planes often need adjusting. Clipping planes
# consist of two planes: near and far along the view direction. The 
# near plane clips out objects in front of the plane the far plane
# clips out objects behind the plane. This way only what is drawn
# between the planes is actually rendered.
aRenderer ResetCameraClippingRange

# Set up a callback (using command/observer) to bring up the Tcl 
# command GUI when the keypress-u (UserEvent) key is pressed.
iren AddObserver UserEvent {wm deiconify .vtkInteract}

# Interact with data. The Tcl/Tk event loop is started automatically.
iren Initialize
wm withdraw .