This file is indexed.

/usr/bin/GMT is in gmt 4.5.12-1.

This file is owned by root:root, with mode 0o755.

The actual contents of the file can be viewed below.

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#!/bin/bash -f
#--------------------------------------------------------------------
#	$Id: GMT.in 10173 2014-01-01 09:52:34Z pwessel $
#
#	Copyright (c) 1991-2014 by P. Wessel and W. H. F. Smith
#	See LICENSE.TXT file for copying and redistribution conditions.
#
#	This program is free software; you can redistribute it and/or
#	modify it under the terms of the GNU General Public License as
#	published by the Free Software Foundation; version 2 of the
#	License.
#
#	This program is distributed in the hope that it will be useful,
#	but WITHOUT ANY WARRANTY; without even the implied warranty of
#	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#	GNU General Public License for more details.
#
#	Contact info: gmt.soest.hawaii.edu
#--------------------------------------------------------------------
#
# GMT is a startup script that knows where the GMT binaries lives.
# Its purpose is to preface the command argument with ${exec_prefix}/bin
# and, in the absence of any arguments, list the GMT programs
#
# Author:	Paul Wessel
# Date:		01-JAN-2009
# Version:	4.x

prefix=/usr/lib/gmt
exec_prefix=${prefix}
datarootdir=${prefix}/share

if [ "x$1" = "x--version" ] || [ "x$1" = "x-v" ]; then
	cat << EOF >&2
GMT Version 4.5.12
Copyright 1991-2014 Paul Wessel and Walter H. F. Smith

This program comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of this program under the terms of the
GNU General Public License.
For more information about these matters, see the file named LICENSE.TXT.
For a brief description of GMT programs, type GMT --help
EOF
	exit
fi

if [ $# = 0 ] || [ $1 = "help" ] || [ "x$1" = "x-help" ] || [ "x$1" = "x--help" ] || [ x$1 = "x-h" ]; then
	${PAGER:-pager} >&2 << EOF

GMT - The Generic Mapping Tools data processing and display software package
			        Version 4.5.12
			     
GMT is a collection of public-domain Unix tools that allows you to manipulate
x,y and x,y,z data sets (filtering, trend fitting, gridding, projecting, etc.)
and to produce PostScript illustrations ranging from simple x-y plots, via
contour maps, to artificially illuminated surfaces and 3-D perspective views
in black/white or full color.  Linear, log10, and power scaling are supported
in additon to 25 common map projections.  The processing and display routines
within GMT are completely general and will handle any (x,y) or (x,y,z) data
as input.

The following is a summary of all the programs supplied with GMT and
a very short descriptions of their purpose. Detailed information about each program
can be found in each program's manual page.

	blockmean	L2 (x,y,z) data filter/decimator
	blockmedian	L1 (x,y,z) data filter/decimator
	blockmode	Mode (x,y,z) data filter/decimator
	filter1d	Filter 1-D data sets (time series)
	fitcircle	Finds best-fitting great circle to a set of points
	gmt2rgb		Convert Sun rasterfile or grid to r, g, b grids
	gmtconvert	Convert between ASCII and binary 1-D tables
	gmtdefaults	List the current default settings
	gmtmath		Mathematical operations on data tables
	gmtset		Set individual default parameters
	gmtselect	Extract data subsets based on spatial criteria
	grd2cpt		Make color palette table from grid files
	grd2xyz		Conversion from 2-D grid file to table data
	grdblend	Blend several partially over-lapping grid files onto one grid
	grdclip		Limit the z-range in gridded data
	grdcontour	Contouring of 2-D gridded data
	grdcut		Cut a sub-region from a grid file
	grdedit		Modify header information in a 2-D grid file
	grdfft		Operate on grid files in the wavenumber (or frequency) domain
	grdfilter	Filter a 2-D grid file in the space (or time) domain
	grdgradient	Compute directional gradient from grid files
	grdhisteq	Histogram equalization for grid files
	grdimage	Produce images from 2-D gridded data
	grdinfo		Get information about grid files
	grdlandmask	Create mask grid file from shoreline data base
	grdmask		Reset nodes outside a clip path to a constant
	grdmath		Mathematical operations on grid files
	grdpaste	Paste together grid files along a common edge
	grdproject	Project gridded data onto a new coordinate system
	grdreformat	Converting between different grid file formats
	grdsample	Resample a 2-D gridded data set onto a new grid
	grdtrend	Fits polynomial trends to grid files
	grdtrack	Sampling of 2-D data set along 1-D track
	grdvector	Plot vector fields from grid files
	grdview		3-D perspective imaging of 2-D gridded data
	grdvolume	Volume calculations from 2-D gridded data
	greenspline	Interpolation using Green's functions for splines in 1-3 dimensions
	makecpt		Make color palette tables
	mapproject	Forward or inverse map projections of table data
	minmax		Find extreme values in data tables
	nearneighbor	Nearest-neighbor gridding scheme
	project		Project data onto lines/great circles
	ps2raster	Crop and convert PostScript files to raster images, EPS, and PDF
	psbasemap	Create a basemap plot
	psclip		Use polygon files to define clipping paths
	pscoast		Plot coastlines and filled continents on maps
	pscontour	Contour xyz-data by triangulation
	pshistogram	Plot a histogram
	psimage		Plot images (EPS or Sun raster files) on maps
	pslegend	Plot legend on maps
	psmask		Create overlay to mask out regions on maps
	psrose		Plot sector or rose diagrams
	psscale		Plot gray scale or color scale on maps
	pstext		Plot text strings on maps
	pswiggle	Draw time-series along track on maps
	psxy		Plot symbols, polygons, and lines on maps
	psxyz		Plot symbols, polygons, and lines in 3-D
	sample1d	Resampling of 1-D table data
	spectrum1d	Compute various spectral estimates from time-series
	splitxyz	Split xyz-files into several segments
	surface		A continuous curvature gridding algorithm
	trend1d		Fits polynomial or Fourier trends to y = f(x) data
	trend2d		Fits polynomial trends to z = f(x,y) data
	triangulate	Perform Delaunay triangulation and gridding
	xyz2grd		Convert equidistant xyz data to a 2-D grid file

Look up the individual man pages for more details and full syntax.
Those man pages are installed in ${datarootdir}/man/man?.
Information is also available on the GMT World Wide Web home page
(http://gmt.soest.hawaii.edu) and, if installed, locally from
${datarootdir}/doc/${PACKAGE_TARNAME}/html/gmt_services.html.

Default locations of GMT components:
	executables	${exec_prefix}/bin
	library		${exec_prefix}/lib
	shared data	${datarootdir}
	manual pages	${datarootdir}/man/man?
	documentation	${datarootdir}/doc/${PACKAGE_TARNAME}

The user has control over the following environment variables:

	location of shared data (including subdirectories coast, cpt, etc.):
		GMT_SHAREDIR = ${GMT_SHAREDIR:-${datarootdir} (default)}

	user-specific configurations (color tables, .gmtdefaults, etc.):
		GMT_USERDIR = ${GMT_USERDIR:-$HOME/.gmt (default)}

	user-specific data (grids, column data):
		GMT_DATADIR = ${GMT_DATADIR:-(undefined)}

	other deprecated data directories:
		GMT_GRIDDIR = ${GMT_GRIDDIR:-(undefined)}
		GMT_IMGDIR = ${GMT_IMGDIR:-(undefined)}
EOF
	exit
fi

# OK try to run the command by prefixing the GMT bin path
# The bin path was generated by configure and should thus
# correspond to the dir where GMT binaries were placed
# 

PATH=$PATH:${exec_prefix}/bin exec ${exec_prefix}/bin/"$@"