/usr/bin/h5redeploy is in hdf5-tools 1.8.13+docs-15+deb8u1.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 | #! /bin/sh
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including
# terms governing use, modification, and redistribution, is contained in
# the files COPYING and Copyright.html. COPYING can be found at the root
# of the source code distribution tree; Copyright.html can be found at the
# root level of an installed copy of the electronic HDF5 document set and
# is linked from the top-level documents page. It can also be found at
# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
# access to either file, you may request a copy from help@hdfgroup.org.
#
## Update HDF5 compiler tools after the HDF5 software has been installed ##
## in a new location. ##
## For help page, use "h5redeploy -help" ##
## ##
# Constants definitions
EXIT_SUCCESS=0
EXIT_FAILURE=1
# Function definitions
# show help page
usage() {
# A wonderfully informative "usage" message.
echo "usage: $prog_name [OPTIONS]"
echo " OPTIONS:"
echo " -help|help This help message"
echo " -echo Show all the shell commands executed"
echo " -force No prompt, just do it"
echo " -prefix=DIR New directory to find HDF5 lib/ and include/"
echo " subdirectories [default: current directory]"
echo " -exec-prefix=DIR New directory to find HDF5 lib/"
echo " subdirectory [default: <prefix>]"
echo " -libdir=DIR New directory for the HDF5 lib directory"
echo " [default: <exec-prefix>/lib]"
echo " -includedir=DIR New directory for the HDF5 header files"
echo " [default: <prefix>/include]"
echo " -tool=TOOL Tool to update. TOOL must be in the current"
echo " directory and writable. [default: $h5tools]"
echo " -show Show the commands without executing them"
echo " "
exit $EXIT_FAILURE
}
# display variable values
dump_vars(){
echo "====Showing all variable values====="
echo prefix=$prefix
echo h5tools=$h5tools
echo "====End Showing====="
}
# show actions to be taken
show_action()
{
echo "Update the following tools because they are now installed at a new directory"
for t in $foundtools; do
echo "${t}:"
echo " current setting=`sed -e '/^prefix=/s/prefix=//p' -e d $t`"
echo " new setting="\""$prefix"\"
done
}
# Report Error message
ERROR()
{
echo "***ERROR***"
echo "$1"
}
# Main
#
############################################################################
## Installation directories: ##
## prefix architecture-independent files. ##
## exec_prefix architecture-dependent files, default is <prefix>. ##
## libdir libraries, default is <exec_prefix>/lib. ##
## includedir header files, default is <prefix/include>. ##
## Not used here: ##
## bindir executables, <exec_prefix/bin>. ##
############################################################################
# Initialization
h5tools="h5cc h5pcc h5fc h5pfc h5c++" # possible hdf5 tools
foundtools= # tools found and will be modified
fmode= # force mode, default is off
prefix=
exec_prefix=
libdir=
includedir=
# Parse options
for arg in $@ ; do
case "$arg" in
-prefix=*)
prefix="`echo $arg | cut -f2 -d=`"
;;
-exec-prefix=*)
exec_prefix="`echo $arg | cut -f2 -d=`"
;;
-libdir=*)
libdir="`echo $arg | cut -f2 -d=`"
;;
-includedir=*)
includedir="`echo $arg | cut -f2 -d=`"
;;
-echo)
set -x
;;
-show)
SHOW="echo"
;;
-tool=*)
h5tools="`echo $arg | cut -f2 -d=`"
;;
-help|help)
usage
;;
-force)
fmode=yes
;;
*)
ERROR "Unknown Option($arg)"
usage
exit $EXIT_FAILURE
;;
esac
done
# Set to default value, one above where i am, if not given by user
if [ -z "$prefix" ]; then
prefix=`(cd ..;pwd)`
fi
if [ -z "$exec_prefix" ]; then
exec_prefix='${prefix}' # use single quotes to prevent expansion of $
fi
if [ -z "$libdir" ]; then
libdir='${exec_prefix}'/lib # use single quotes to prevent expansion of $
fi
if [ -z "$includedir" ]; then
includedir='${prefix}'/include # use single quotes to prevent expansion of $
fi
for x in $h5tools; do
if [ -f $x ]; then
foundtools="$foundtools $x"
if [ ! -w $x ]; then
ERROR "h5tool($x) is not writable"
exit $EXIT_FAILURE
fi
fi
done
if [ -z "$foundtools" ]; then
ERROR "found no tools to modify"
exit $EXIT_FAILURE
fi
# Show actions to be taken and get consent
show_action
# Ask confirmation unless fmode is on
if [ x-$fmode = x- ]; then
echo "Continue? (yes/no)"
read ansx
ans=`echo $ansx | tr "[A-Z]" "[a-z]"`
if [ x-$ans != x-yes ]; then
echo ABORT. No tools changed.
exit $EXIT_FAILURE
fi
fi
# Create the update commands
CMDFILE=/tmp/h5redeploy.$$
touch $CMDFILE
chmod 0600 $CMDFILE
echo "/^prefix=/c" >> $CMDFILE
echo prefix=\""$prefix"\" >> $CMDFILE
echo . >> $CMDFILE
echo "/^exec_prefix=/c" >> $CMDFILE
echo exec_prefix=\""$exec_prefix"\" >> $CMDFILE
echo . >> $CMDFILE
echo "/^libdir=/c" >> $CMDFILE
echo libdir=\""$libdir"\" >> $CMDFILE
echo . >> $CMDFILE
echo "/^includedir=/c" >> $CMDFILE
echo includedir=\""$includedir"\" >> $CMDFILE
echo . >> $CMDFILE
(echo w; echo q) >> $CMDFILE
# Update them
if [ "$SHOW" = "echo" ]; then
echo "===Update commands are:===="
cat $CMDFILE
echo "===End Update commands====="
fi
for t in $foundtools; do
echo Update $t ...
COMMAND="ed - $t"
if [ "$SHOW" = "echo" ]; then
echo $COMMAND
else
$COMMAND < $CMDFILE
fi
done
# Cleanup
rm -f $CMDFILE
exit $EXIT_SUCCESS
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