/usr/share/qt4/mkspecs/avogadro.prf is in libavogadro-dev 1.0.3-10.1+b2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 | AVOGADRO_PREFIX = /usr
OPENBABEL_PREFIX = /usr/include/openbabel-2.0/../..
INCLUDEPATH += . \
$$AVOGADRO_PREFIX/include \
/usr/include/openbabel-2.0 \
/usr/include/eigen3
LIBS += -L$$AVOGADRO_PREFIX/lib -lavogadro \
-L$$OPENBABEL_PREFIX/lib -lopenbabel
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