/usr/include/dune/common/parallel/mpicollectivecommunication.hh is in libdune-common-dev 2.3.1-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 | // -*- tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 2 -*-
// vi: set et ts=4 sw=2 sts=2:
#ifndef DUNE_MPICOLLECTIVECOMMUNICATION_HH
#define DUNE_MPICOLLECTIVECOMMUNICATION_HH
/*!
\file
\brief Implements an utility class that provides
MPI's collective communication methods.
\ingroup ParallelCommunication
*/
#include <iostream>
#include <complex>
#include <algorithm>
#include <functional>
#include <dune/common/exceptions.hh>
#include <dune/common/binaryfunctions.hh>
#include <dune/common/shared_ptr.hh>
#include "collectivecommunication.hh"
#include "mpitraits.hh"
#if HAVE_MPI
// MPI header
#include <mpi.h>
namespace Dune
{
//=======================================================
// use singleton pattern and template specialization to
// generate MPI operations
//=======================================================
template<typename Type, typename BinaryFunction>
class Generic_MPI_Op
{
public:
static MPI_Op get ()
{
if (!op)
{
op = shared_ptr<MPI_Op>(new MPI_Op);
MPI_Op_create((void (*)(void*, void*, int*, MPI_Datatype*))&operation,true,op.get());
}
return *op;
}
private:
static void operation (Type *in, Type *inout, int *len, MPI_Datatype *dptr)
{
BinaryFunction func;
for (int i=0; i< *len; ++i, ++in, ++inout) {
Type temp;
temp = func(*in, *inout);
*inout = temp;
}
}
Generic_MPI_Op () {}
Generic_MPI_Op (const Generic_MPI_Op& ) {}
static shared_ptr<MPI_Op> op;
};
template<typename Type, typename BinaryFunction>
shared_ptr<MPI_Op> Generic_MPI_Op<Type,BinaryFunction>::op = shared_ptr<MPI_Op>(static_cast<MPI_Op*>(0));
#define ComposeMPIOp(type,func,op) \
template<> \
class Generic_MPI_Op<type, func<type> >{ \
public:\
static MPI_Op get(){ \
return op; \
} \
private:\
Generic_MPI_Op () {}\
Generic_MPI_Op (const Generic_MPI_Op & ) {}\
}
ComposeMPIOp(char, std::plus, MPI_SUM);
ComposeMPIOp(unsigned char, std::plus, MPI_SUM);
ComposeMPIOp(short, std::plus, MPI_SUM);
ComposeMPIOp(unsigned short, std::plus, MPI_SUM);
ComposeMPIOp(int, std::plus, MPI_SUM);
ComposeMPIOp(unsigned int, std::plus, MPI_SUM);
ComposeMPIOp(long, std::plus, MPI_SUM);
ComposeMPIOp(unsigned long, std::plus, MPI_SUM);
ComposeMPIOp(float, std::plus, MPI_SUM);
ComposeMPIOp(double, std::plus, MPI_SUM);
ComposeMPIOp(long double, std::plus, MPI_SUM);
ComposeMPIOp(char, std::multiplies, MPI_PROD);
ComposeMPIOp(unsigned char, std::multiplies, MPI_PROD);
ComposeMPIOp(short, std::multiplies, MPI_PROD);
ComposeMPIOp(unsigned short, std::multiplies, MPI_PROD);
ComposeMPIOp(int, std::multiplies, MPI_PROD);
ComposeMPIOp(unsigned int, std::multiplies, MPI_PROD);
ComposeMPIOp(long, std::multiplies, MPI_PROD);
ComposeMPIOp(unsigned long, std::multiplies, MPI_PROD);
ComposeMPIOp(float, std::multiplies, MPI_PROD);
ComposeMPIOp(double, std::multiplies, MPI_PROD);
ComposeMPIOp(long double, std::multiplies, MPI_PROD);
ComposeMPIOp(char, Min, MPI_MIN);
ComposeMPIOp(unsigned char, Min, MPI_MIN);
ComposeMPIOp(short, Min, MPI_MIN);
ComposeMPIOp(unsigned short, Min, MPI_MIN);
ComposeMPIOp(int, Min, MPI_MIN);
ComposeMPIOp(unsigned int, Min, MPI_MIN);
ComposeMPIOp(long, Min, MPI_MIN);
ComposeMPIOp(unsigned long, Min, MPI_MIN);
ComposeMPIOp(float, Min, MPI_MIN);
ComposeMPIOp(double, Min, MPI_MIN);
ComposeMPIOp(long double, Min, MPI_MIN);
ComposeMPIOp(char, Max, MPI_MAX);
ComposeMPIOp(unsigned char, Max, MPI_MAX);
ComposeMPIOp(short, Max, MPI_MAX);
ComposeMPIOp(unsigned short, Max, MPI_MAX);
ComposeMPIOp(int, Max, MPI_MAX);
ComposeMPIOp(unsigned int, Max, MPI_MAX);
ComposeMPIOp(long, Max, MPI_MAX);
ComposeMPIOp(unsigned long, Max, MPI_MAX);
ComposeMPIOp(float, Max, MPI_MAX);
ComposeMPIOp(double, Max, MPI_MAX);
ComposeMPIOp(long double, Max, MPI_MAX);
#undef ComposeMPIOp
//=======================================================
// use singleton pattern and template specialization to
// generate MPI operations
//=======================================================
/*! \brief Specialization of CollectiveCommunication for MPI
\ingroup ParallelCommunication
*/
template<>
class CollectiveCommunication<MPI_Comm>
{
public:
//! Instantiation using a MPI communicator
CollectiveCommunication (const MPI_Comm& c)
: communicator(c)
{
if(communicator!=MPI_COMM_NULL) {
MPI_Comm_rank(communicator,&me);
MPI_Comm_size(communicator,&procs);
}else{
procs=0;
me=-1;
}
}
//! @copydoc CollectiveCommunication::rank
int rank () const
{
return me;
}
//! @copydoc CollectiveCommunication::size
int size () const
{
return procs;
}
//! @copydoc CollectiveCommunication::sum
template<typename T>
T sum (T& in) const // MPI does not know about const :-(
{
T out;
allreduce<std::plus<T> >(&in,&out,1);
return out;
}
//! @copydoc CollectiveCommunication::sum
template<typename T>
int sum (T* inout, int len) const
{
return allreduce<std::plus<T> >(inout,len);
}
//! @copydoc CollectiveCommunication::prod
template<typename T>
T prod (T& in) const // MPI does not know about const :-(
{
T out;
allreduce<std::multiplies<T> >(&in,&out,1);
return out;
}
//! @copydoc CollectiveCommunication::prod
template<typename T>
int prod (T* inout, int len) const
{
return allreduce<std::multiplies<T> >(inout,len);
}
//! @copydoc CollectiveCommunication::min
template<typename T>
T min (T& in) const // MPI does not know about const :-(
{
T out;
allreduce<Min<T> >(&in,&out,1);
return out;
}
//! @copydoc CollectiveCommunication::min
template<typename T>
int min (T* inout, int len) const
{
return allreduce<Min<T> >(inout,len);
}
//! @copydoc CollectiveCommunication::max
template<typename T>
T max (T& in) const // MPI does not know about const :-(
{
T out;
allreduce<Max<T> >(&in,&out,1);
return out;
}
//! @copydoc CollectiveCommunication::max
template<typename T>
int max (T* inout, int len) const
{
return allreduce<Max<T> >(inout,len);
}
//! @copydoc CollectiveCommunication::barrier
int barrier () const
{
return MPI_Barrier(communicator);
}
//! @copydoc CollectiveCommunication::broadcast
template<typename T>
int broadcast (T* inout, int len, int root) const
{
return MPI_Bcast(inout,len,MPITraits<T>::getType(),root,communicator);
}
//! @copydoc CollectiveCommunication::gather()
//! @note out must have space for P*len elements
template<typename T>
int gather (T* in, T* out, int len, int root) const
{
return MPI_Gather(in,len,MPITraits<T>::getType(),
out,len,MPITraits<T>::getType(),
root,communicator);
}
//! @copydoc CollectiveCommunication::scatter()
//! @note out must have space for P*len elements
template<typename T>
int scatter (T* send, T* recv, int len, int root) const
{
return MPI_Scatter(send,len,MPITraits<T>::getType(),
recv,len,MPITraits<T>::getType(),
root,communicator);
}
operator MPI_Comm () const
{
return communicator;
}
//! @copydoc CollectiveCommunication::allgather()
template<typename T, typename T1>
int allgather(T* sbuf, int count, T1* rbuf) const
{
return MPI_Allgather(sbuf, count, MPITraits<T>::getType(),
rbuf, count, MPITraits<T1>::getType(),
communicator);
}
//! @copydoc CollectiveCommunication::allreduce(Type* inout,int len) const
template<typename BinaryFunction, typename Type>
int allreduce(Type* inout, int len) const
{
Type* out = new Type[len];
int ret = allreduce<BinaryFunction>(inout,out,len);
std::copy(out, out+len, inout);
delete[] out;
return ret;
}
//! @copydoc CollectiveCommunication::allreduce(Type* in,Type* out,int len) const
template<typename BinaryFunction, typename Type>
int allreduce(Type* in, Type* out, int len) const
{
return MPI_Allreduce(in, out, len, MPITraits<Type>::getType(),
(Generic_MPI_Op<Type, BinaryFunction>::get()),communicator);
}
private:
MPI_Comm communicator;
int me;
int procs;
};
} // namespace dune
#endif
#endif
|