/usr/include/rheolef/asr.h is in librheolef-dev 6.5-1+b1.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 | # ifndef _RHEO_NEW_ASR_H
# define _RHEO_NEW_ASR_H
///
/// This file is part of Rheolef.
///
/// Copyright (C) 2000-2009 Pierre Saramito <Pierre.Saramito@imag.fr>
///
/// Rheolef is free software; you can redistribute it and/or modify
/// it under the terms of the GNU General Public License as published by
/// the Free Software Foundation; either version 2 of the License, or
/// (at your option) any later version.
///
/// Rheolef is distributed in the hope that it will be useful,
/// but WITHOUT ANY WARRANTY; without even the implied warranty of
/// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
/// GNU General Public License for more details.
///
/// You should have received a copy of the GNU General Public License
/// along with Rheolef; if not, write to the Free Software
/// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
///
/// =========================================================================
#include "rheolef/array.h"
#include "rheolef/pair_set.h"
#include "rheolef/diststream.h"
// -------------------------------------------------------------
// the asr class
// -------------------------------------------------------------
namespace rheolef {
template<class T, class M> class csr;
template<class T, class M> class csr_rep;
/*Class:asr
NAME: @code{asr} - associative sparse matrix (@PACKAGE@-@VERSION@)
SYNOPSYS:
Associative sparse matrix container, used during FEM assembling process.
IMPLEMENTATION NOTE:
Elements are stored row by row using the pair_set class bqsed on the STL map class.
Implementation of asr uses array<pair_set>
AUTHORS:
LMC-IMAG, 38041 Grenoble cedex 9, France
| Pierre.Saramito@imag.fr
DATE: 6 january 1999, last update 20 may 2012.
End:
*/
//<verbatim:
template<class T, class M = rheo_default_memory_model, class A = std::allocator<T> >
class asr : public array<pair_set<T,A>, M, A> {
public:
// typedefs:
typedef pair_set<T,A> row_type;
typedef array<row_type,M,A> base;
typedef typename base::size_type size_type;
typedef M memory_type;
struct dis_reference {
dis_reference (typename base::dis_reference row_dis_i, size_type dis_j)
: _row_dis_i(row_dis_i), _dis_j(dis_j) {}
dis_reference& operator+= (const T& value) {
_row_dis_i += std::pair<size_type,T>(_dis_j,value);
return *this;
}
typename base::dis_reference _row_dis_i;
size_type _dis_j;
};
// allocators/deallocators:
asr (const A& alloc = A())
: base(distributor(), row_type(alloc), alloc), _col_ownership(), _nnz(0), _dis_nnz(0) {}
asr (const distributor& row_ownership, const distributor& col_ownership, const A& alloc = A())
: base(row_ownership, row_type(alloc), alloc), _col_ownership(col_ownership), _nnz(0), _dis_nnz(0) {}
asr (const csr_rep<T,M>&, const A& alloc = A());
asr (const csr<T,M>&, const A& alloc = A());
void build_from_csr (const csr_rep<T,M>&);
void resize (const distributor& row_ownership, const distributor& col_ownership)
{
base::resize (row_ownership);
_col_ownership = col_ownership;
_nnz = _dis_nnz = 0;
}
// accessors:
const communicator& comm() const { return base::comm(); }
size_type nrow () const { return base::size(); }
size_type ncol () const { return _col_ownership.size(); }
size_type nnz () const { return _nnz; }
size_type dis_nrow () const { return base::dis_size(); }
size_type dis_ncol () const { return _col_ownership.dis_size(); }
size_type dis_nnz () const { return _dis_nnz; }
const distributor& row_ownership() const { return base::ownership(); }
const distributor& col_ownership() const { return _col_ownership; }
// modifiers:
T operator() (size_type i, size_type dis_j) const;
T& semi_dis_entry (size_type i, size_type dis_j);
dis_reference dis_entry (size_type dis_i, size_type dis_j);
// dis_entry_assembly_end is redefined in order to recompute _nnz and _dis_nnz
void dis_entry_assembly_begin() { base::dis_entry_assembly_begin (pair_set_add_op<row_type>()); }
void dis_entry_assembly_end() { base::dis_entry_assembly_end (pair_set_add_op<row_type>()); _recompute_nnz(); }
void dis_entry_assembly() { dis_entry_assembly_begin(); dis_entry_assembly_end(); }
// io:
odiststream& put (odiststream& ops) const;
idiststream& get (idiststream& ips);
// internal:
odiststream& put_mpi (odiststream& ops) const;
odiststream& put_seq (odiststream& ops, size_type first_dis_i = 0) const;
odiststream& put_seq_sparse_matlab (odiststream& ops, size_type first_dis_i = 0) const;
odiststream& put_seq_matrix_market (odiststream& ops, size_type first_dis_i = 0) const;
protected:
void _recompute_nnz();
// data:
distributor _col_ownership;
size_type _nnz;
size_type _dis_nnz;
};
//>verbatim:
// ----------------------------------------------------------------------------
// inlined
// ----------------------------------------------------------------------------
template <class T, class M, class A>
inline
asr<T,M,A>::asr (const csr<T,M>& a, const A& alloc)
: base(a.row_ownership(), row_type(alloc), alloc),
_col_ownership(a.col_ownership()),
_nnz(a.nnz()),
_dis_nnz(a.dis_nnz())
{
build_from_csr (a.data());
}
template <class T, class M, class A>
inline
asr<T,M,A>::asr (const csr_rep<T,M>& a, const A& alloc)
: base(a.row_ownership(), row_type(alloc), alloc),
_col_ownership(a.col_ownership()),
_nnz(a.nnz()),
_dis_nnz(a.dis_nnz())
{
build_from_csr (a);
}
template <class T, class M, class A>
inline
idiststream&
operator>> (idiststream& s, asr<T,M,A>& x)
{
return x.get(s);
}
template <class T, class M, class A>
inline
odiststream&
operator<< (odiststream& s, const asr<T,M,A>& x)
{
return x.put(s);
}
template <class T, class M, class A>
inline
T
asr<T,M,A>::operator() (size_type i, size_type dis_j) const
{
typename row_type::const_iterator pos_aij = base::operator[](i).find(dis_j);
if (pos_aij != base::operator[](i).end()) {
return (*pos_aij).second;
} else {
return T(0);
}
}
template <class T, class M, class A>
inline
T&
asr<T,M,A>::semi_dis_entry (size_type i, size_type dis_j)
{
row_type& row_i = base::operator[](i);
std::pair<typename row_type::iterator,bool> status
= row_i.insert (std::pair<size_type,T>(dis_j,T(0)));
return (*(status.first)).second;
}
template <class T, class M, class A>
inline
typename asr<T,M,A>::dis_reference
asr<T,M,A>::dis_entry (size_type dis_i, size_type dis_j)
{
assert_macro (dis_i < dis_nrow() && dis_j < dis_ncol(),
"indexes ("<<dis_i<<" "<<dis_j<<") out of range [0:"
<< dis_nrow() << "[x[0:" << dis_ncol() << "[");
return dis_reference (base::dis_entry (dis_i), dis_j);
}
} // namespace rheolef
# endif // _RHEO_NEW_ASR_H
|