This file is indexed.

/usr/include/rheolef/vec.h is in librheolef-dev 6.5-1+b1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
#ifndef _RHEO_VEC_H
#define _RHEO_VEC_H
///
/// This file is part of Rheolef.
///
/// Copyright (C) 2000-2009 Pierre Saramito <Pierre.Saramito@imag.fr>
///
/// Rheolef is free software; you can redistribute it and/or modify
/// it under the terms of the GNU General Public License as published by
/// the Free Software Foundation; either version 2 of the License, or
/// (at your option) any later version.
///
/// Rheolef is distributed in the hope that it will be useful,
/// but WITHOUT ANY WARRANTY; without even the implied warranty of
/// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
/// GNU General Public License for more details.
///
/// You should have received a copy of the GNU General Public License
/// along with Rheolef; if not, write to the Free Software
/// Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
/// 
/// =========================================================================

# include "rheolef/array.h"
# include "boost/numeric/ublas/storage.hpp"

namespace rheolef {

// for vec[range]:
using boost::numeric::ublas::basic_range;
using boost::numeric::ublas::range;
template <class Expr>       struct vec_expr;
template <class T, class M> class vec_range;
template <class T, class M> class vec_range_const;

// for vec = {x,y};
template <class T, class M> class vec_concat_value;

/*Class:vec
NAME: @code{vec} - vector in distributed environment (@PACKAGE@-@VERSION@)
SYNOPSYS:       
  STL-like vector container for a sequential or
  distributed memory machine model.
  Additional operation fom classical algebra.
EXAMPLE:
   A sample usage of the class is:
   @example
     int main(int argc, char**argv) @{
        environment distributed(argc, argv);
        vec<double> x(100, 3.14);
        dout << x << endl;
     @}
   @end example
IMPLEMENTATION NOTE:
   Implementation use array<T,M>.
SEE ALSO: "array"(1)
AUTHORS: Pierre.Saramito@imag.fr
DATE:   19 november 1998
End:
*/

//<vec:
template <class T, class M = rheo_default_memory_model>
class vec : public array<T, M> {
public:

// typedef:

    typedef array<T, M> base;
    typedef typename base::size_type                         size_type;
    typedef std::ptrdiff_t                                   difference_type;
#ifdef TODO
    // pb compile avec boost sur foehn:
    typedef typename base::difference_type                   difference_type;
#endif // TODO
    typedef basic_range<size_type, difference_type>          range_type;
    typedef typename base::reference                         reference;
    typedef typename base::const_reference                   const_reference;
    typedef typename base::iterator                          iterator;
    typedef typename base::const_iterator                    const_iterator;

// allocator/deallocator:

    vec (const distributor& ownership,
	const T&  init_val = std::numeric_limits<T>::max());

    vec(size_type dis_size = 0,
	const T&  init_val = std::numeric_limits<T>::max());

    void resize (
        const distributor& ownership,
        const T&  init_val = std::numeric_limits<T>::max());

    void resize (
        size_type size = 0,
        const T&  init_val = std::numeric_limits<T>::max());

// accessors:

    const_reference operator[] (size_type i) const;
    reference       operator[] (size_type i);

    T max_abs () const;

// range:

    vec(const vec_range<T,M>& vr);
    vec(const vec_range_const<T,M>& vr);
    vec<T,M>& operator= (const vec_range<T,M>& vr);
    vec<T,M>& operator= (const vec_range_const<T,M>& vr);

    vec_range_const<T,M> operator[] (const range_type& r) const;
    vec_range<T,M>       operator[] (const range_type& r);

// assignment to a constant:

    vec<T,M>& operator= (const int& expr);
    vec<T,M>& operator= (const T& expr);

// expression template:

    template<typename Expr>
    vec (const vec_expr<Expr>& expr);

    template<typename Expr>
    vec<T,M>& operator= (const vec_expr<Expr>& expr);

// initializer list (c++ 2011):

#ifdef _RHEOLEF_HAVE_STD_INITIALIZER_LIST
    vec (const std::initializer_list<vec_concat_value<T,M> >& init_list);
    vec<T,M>& operator= (const std::initializer_list<vec_concat_value<T,M> >& init_list);
#endif // _RHEOLEF_HAVE_STD_INITIALIZER_LIST
};
//>vec:

// ----------------------------------------------------------------------------
// inlined
// ----------------------------------------------------------------------------
template <class T, class M>
inline
vec<T,M>::vec (
    const distributor& ownership,
    const T&  init_val)
  : array<T,M>(ownership,init_val)
{
}
template <class T, class M>
inline
vec<T,M>::vec (
    size_type dis_size,
    const T&  init_val)
  : array<T,M>(dis_size,init_val)
{
}
template <class T, class M>
inline
void
vec<T,M>::resize (
        const distributor& ownership,
        const T&  init_val)
{
    base::resize (ownership, init_val);
}
template <class T, class M>
inline
void
vec<T,M>::resize (
        size_type dis_size,
        const T&  init_val)
{
    base::resize (dis_size, init_val);
}
template <class T, class M>
inline
vec<T,M>&
vec<T,M>::operator= (const int& expr)
{
    std::fill (array<T,M>::begin(), array<T,M>::end(), expr);
    return *this;
}
template <class T, class M>
inline
vec<T,M>&
vec<T,M>::operator= (const T& expr)
{
    std::fill (array<T,M>::begin(), array<T,M>::end(), expr);
    return *this;
}
template <class T, class M>
inline
vec<T,M>&
vec<T,M>::operator= (const vec_range_const<T,M>& vr)
{
    distributor ownership (distributor::decide, vr._u.comm(), vr._r.size());
    resize (ownership);
    std::copy (vr.begin(), vr.end(), base::begin());
    return *this;
}
template <class T, class M>
inline
vec<T,M>&
vec<T,M>::operator= (const vec_range<T,M>& vr)
{
    operator= (vec_range_const<T,M>(vr));
    return *this;
}
template <class T, class M>
inline
vec<T,M>::vec(const vec_range<T,M>& vr)
  : array<T,M>()
{
    operator= (vr);
}
template <class T, class M>
inline
vec<T,M>::vec(const vec_range_const<T,M>& vr)
  : array<T,M>()
{
    operator= (vr);
}
template <class T, class M>
inline
typename vec<T,M>::const_reference
vec<T,M>::operator[] (size_type i) const
{
    return base::operator[] (i);
}
template <class T, class M>
inline
typename vec<T,M>::reference
vec<T,M>::operator[] (size_type i)
{
    return base::operator[] (i);
}
template <class T, class M>
inline
vec_range<T,M>
vec<T,M>::operator[] (const range_type& r)
{
    return vec_range<T,M> (*this, r);
}
template <class T, class M>
inline
vec_range_const<T,M>
vec<T,M>::operator[] (const range_type& r) const
{
    return vec_range_const<T,M> (*this, r);
}
template <class T, class M>
inline
T
vec<T,M>::max_abs () const
{
    T val = 0;
    for (const_iterator iter = base::begin(), last = base::end(); iter != last; iter++) {
      val = std::max(val, abs(*iter));
    }
#ifdef _RHEOLEF_HAVE_MPI
    val = mpi::all_reduce (base::comm(), val, mpi::maximum<T>());
#endif // _RHEOLEF_HAVE_MPI
    return val;
}
template <class T>
inline
idiststream&
operator >> (idiststream& ips,  vec<T,sequential>& x)
{ 
    return x.get_values(ips);
}
template <class T, class M> 
inline
odiststream&
operator << (odiststream& ods, const vec<T,M>& x)
{
    iorheo::flag_type format = iorheo::flags(ods.os()) & iorheo::format_field;
    if (format [iorheo::matlab] || format [iorheo::sparse_matlab]) {
      return x.data().put_matlab (ods);
    }
    // default is raw output
    return x.put_values(ods);
}
#ifdef _RHEOLEF_HAVE_MPI
template <class T>
inline
idiststream&
operator >> (idiststream& ips,  vec<T,distributed>& x)
{ 
    return x.get_values(ips); 
}
#ifdef TO_CLEAN
template <class T> 
inline
odiststream&
operator << (odiststream& ods, const vec<T,distributed>& x)
{
    iorheo::flag_type format = iorheo::flags(ods.os()) & iorheo::format_field;
    if (format [iorheo::matlab] || format [iorheo::sparse_matlab]) {
      warning_macro ("put_matlab");
      return x.put_matlab (ods);
    }
    // default is raw output
    warning_macro ("put_default");
    return x.put_values(ods);
}
#endif // TO_CLEAN
#endif // _RHEOLEF_HAVE_MPI

} // namespace rheolef
#endif // _RHEO_VEC_H