This file is indexed.

/usr/include/simbody/SimTKcommon/TemplatizedLapack.h is in libsimbody-dev 3.4.1+dfsg-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
#ifndef SimTK_SimTKCOMMON_TEMPLATIZED_LAPACK_H_
#define SimTK_SimTKCOMMON_TEMPLATIZED_LAPACK_H_

/* -------------------------------------------------------------------------- *
 *                       Simbody(tm): SimTKcommon                             *
 * -------------------------------------------------------------------------- *
 * This is part of the SimTK biosimulation toolkit originating from           *
 * Simbios, the NIH National Center for Physics-Based Simulation of           *
 * Biological Structures at Stanford, funded under the NIH Roadmap for        *
 * Medical Research, grant U54 GM072970. See https://simtk.org/home/simbody.  *
 *                                                                            *
 * Portions copyright (c) 2006-12 Stanford University and the Authors.        *
 * Authors: Michael Sherman                                                   *
 * Contributors:                                                              *
 *                                                                            *
 * Licensed under the Apache License, Version 2.0 (the "License"); you may    *
 * not use this file except in compliance with the License. You may obtain a  *
 * copy of the License at http://www.apache.org/licenses/LICENSE-2.0.         *
 *                                                                            *
 * Unless required by applicable law or agreed to in writing, software        *
 * distributed under the License is distributed on an "AS IS" BASIS,          *
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.   *
 * See the License for the specific language governing permissions and        *
 * limitations under the License.                                             *
 * -------------------------------------------------------------------------- */

/**@file
 * These is a templatized, C++ callable interface to LAPACK and BLAS.
 * Each method must be explicitly specialized for the supported precisions.
 */


#include "SimTKcommon/internal/common.h"
#include "SimTKlapack.h"

#include <complex>
using std::complex;

namespace SimTK {

class Lapack {
public:
    // MEANINGLESS IF NOT SPECIALIZED

        template <class P> static void
    gemm
   (char transa, char transb,
    int m, int n, int k,
    const P& alpha, const P a[], int lda,
    const P b[], int ldb,
    const P& beta, P c[], int ldc) {assert(false);}

        template <class P> static void
    getri
   (int          n,
    P            a[],
    int          lda,
    const int    ipiv[], 
    P            work[], 
    int          lwork, 
    int         &info ) {assert(false);}

        template <class P> static void
    getrf
   (int          m,
    int          n, 
    P            a[],
    int          lda, 
    int          ipiv[], 
    int         &info ) {assert(false);}

};

    // xGEMM //

template <> inline void Lapack::gemm<float>
   (char transa, char transb,
    int m, int n, int k,
    const float& alpha, const float a[], int lda,
    const float b[], int ldb,
    const float& beta, float c[], int ldc)
{
    sgemm_(
        transa, transb,
        m,n,k,alpha,a,lda,b,ldb,beta,c,ldc
    );
}
template <> inline void Lapack::gemm<double>
   (char transa, char transb,
    int m, int n, int k,
    const double& alpha, const double a[], int lda,
    const double b[], int ldb,
    const double& beta, double c[], int ldc)
{
    dgemm_(
        transa, transb,
        m,n,k,alpha,a,lda,b,ldb,beta,c,ldc
    );
}
template <> inline void Lapack::gemm< complex<float> >
   (char transa, char transb,
    int m, int n, int k,
    const complex<float>& alpha, const complex<float> a[], int lda,
    const complex<float> b[], int ldb,
    const complex<float>& beta, complex<float> c[], int ldc)
{
    cgemm_(
        transa, transb,
        m,n,k,alpha,a,lda,b,ldb,beta,c,ldc
    );
}
template <> inline void Lapack::gemm< complex<double> >
   (char transa, char transb,
    int m, int n, int k,
    const complex<double>& alpha, const complex<double> a[], int lda,
    const complex<double> b[], int ldb,
    const complex<double>& beta, complex<double> c[], int ldc)
{
    zgemm_(
        transa, transb,
        m,n,k,alpha,a,lda,b,ldb,beta,c,ldc
    );
}

    // xGETRI //

template <> inline void Lapack::getri<float>
   (int          n,
    float        a[],
    int          lda,
    const int    ipiv[], 
    float        work[], 
    int          lwork, 
    int&         info )
{
    sgetri_(n,a,lda,ipiv,work,lwork,info);
}

template <> inline void Lapack::getri<double>
   (int          n,
    double       a[],
    int          lda,
    const int    ipiv[], 
    double       work[], 
    int          lwork, 
    int&         info )
{
    dgetri_(n,a,lda,ipiv,work,lwork,info);
}

template <> inline void Lapack::getri< complex<float> >
   (int             n,
    complex<float>  a[],
    int             lda,
    const int       ipiv[], 
    complex<float>  work[], 
    int             lwork, 
    int&            info )
{
    cgetri_(n,a,lda,ipiv,work,lwork,info);
}

template <> inline void Lapack::getri< complex<double> >
   (int             n,
    complex<double> a[],
    int             lda,
    const int       ipiv[], 
    complex<double> work[], 
    int             lwork, 
    int&            info )
{
    zgetri_(n,a,lda,ipiv,work,lwork,info);
}
    // xGETRF //

template <> inline void Lapack::getrf<float>
   (int          m,
    int          n, 
    float        a[],
    int          lda, 
    int          ipiv[], 
    int&         info )
{
    sgetrf_(m,n,a,lda,ipiv,info);
}

template <> inline void Lapack::getrf<double>
   (int          m,
    int          n, 
    double       a[],
    int          lda, 
    int          ipiv[], 
    int&         info )
{
    dgetrf_(m,n,a,lda,ipiv,info);
}

template <> inline void Lapack::getrf< complex<float> >
   (int             m,
    int             n, 
    complex<float>  a[],
    int             lda, 
    int             ipiv[], 
    int&            info )
{
    cgetrf_(m,n,a,lda,ipiv,info);
}

template <> inline void Lapack::getrf< complex<double> >
   (int             m,
    int             n, 
    complex<double> a[],
    int             lda, 
    int             ipiv[], 
    int&            info )
{
    zgetrf_(m,n,a,lda,ipiv,info);
}


/*
void SimTK_STDCALL
SimTK_LAPACK(dgeev,DGEEV)
   (const char  &jobvl SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const char  &jobvr SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const int   &n,
    double       a[],
    const int   &lda, 
    double       wr[],
    double       wi[],
    double       vl[],
    const int   &ldvl,
    double       vr[],
    const int   &ldvr,
    double       work[],
    const int   &lwork,
    int         &info  
    SimTK_LAPACK_STRLEN_ATEND_DECL
    SimTK_LAPACK_STRLEN_ATEND_DECL);

void SimTK_STDCALL
SimTK_LAPACK(dsyev,DSYEV)
   (const char  &jobz SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const char  &uplo SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const int   &n,
    double       a[],
    const int   &lda, 
    double       w[],
    double       work[],
    const int   &lwork,
    int         &info  
    SimTK_LAPACK_STRLEN_ATEND_DECL
    SimTK_LAPACK_STRLEN_ATEND_DECL);

void SimTK_STDCALL
SimTK_LAPACK(dspev,DSPEV)
   (const char  &jobz SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const char  &uplo SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const int   &n,
    double       a[],
    double       w[],
    double       z[],
    const int   &ldz,
    double       work[],
    int         &info  
    SimTK_LAPACK_STRLEN_ATEND_DECL
    SimTK_LAPACK_STRLEN_ATEND_DECL);

void SimTK_STDCALL
SimTK_LAPACK(dsptri,DSPTRI)
   (const char  &uplo SimTK_LAPACK_STRLEN_FOLLOWS_DECL,
    const int   &size,
    double       a[],
    int          ipiv[],
    double       work[], 
    int         &info  
    SimTK_LAPACK_STRLEN_ATEND_DECL);

void SimTK_STDCALL
SimTK_LAPACK(dsptrf,DSPTRF)
   (const char  &uplo SimTK_LAPACK_STRLEN_FOLLOWS_DECL,
    const int   &size,
    double       a[],
    int          ipiv[], 
    int         &info  
    SimTK_LAPACK_STRLEN_ATEND_DECL);

void SimTK_STDCALL
SimTK_LAPACK(dsyevx,DSYEVX)
   (const char      &jobz,
    const char      &range,
    const char      &uplo,
    const int       &n,
    double           a[],
    const int       &lda,
    const double    &vl,
    const double    &vu,
    const int       &il,
    const int       &iu,
    const double    &abstol,
    int             &m,
    double           w[],
    double           z[],
    const int       &ldz,
    double           work[],
    const int       &lwork,
    int              iwork[],
    int              ifail[],
    int             &info);

void SimTK_STDCALL
SimTK_LAPACK(dgelss,DGELSS)
   (int             &m,
    const int       &n,
    const int       &nrhs,
    double           a[],
    const int       &lda,
    double           b[],
    const int       &ldb,
    double           s[],
    const double    &rcond,
    int             &rank,
    double           work[],
    const int       &lwork,
    int             &info );

void SimTK_STDCALL
SimTK_LAPACK(dgesv,DGESV)
   (int         &n,
    int         &nrhs,
    double       a[],
    int         &lda,
    int          ipiv[],
    double       b[],
    int         &ldb,
    int         &info);

void SimTK_STDCALL
SimTK_LAPACK(dgesvd,DGESVD)
   (const char  &jobu  SimTK_LAPACK_STRLEN_FOLLOWS_DECL, 
    const char  &jobvt SimTK_LAPACK_STRLEN_FOLLOWS_DECL,
    const int   &m, 
    const int   &n, 
    double       a[],
    const int   &lda,
    double       s[],
    double       u[],
    const int   &ldu, 
    double       vt[], 
    const int   &ldvt, 
    double       work[],
    const int   &lwork, 
    int         &info
    SimTK_LAPACK_STRLEN_ATEND_DECL
    SimTK_LAPACK_STRLEN_ATEND_DECL);

*/

}   // namespace SimTK

#endif // SimTK_SimTKCOMMON_TEMPLATIZED_LAPACK_H_