This file is indexed.

/usr/include/sofa/component/topology/TetrahedronData.inl is in libsofa1-dev 1.0~beta4-9.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
/******************************************************************************
*       SOFA, Simulation Open-Framework Architecture, version 1.0 beta 4      *
*                (c) 2006-2009 MGH, INRIA, USTL, UJF, CNRS                    *
*                                                                             *
* This library is free software; you can redistribute it and/or modify it     *
* under the terms of the GNU Lesser General Public License as published by    *
* the Free Software Foundation; either version 2.1 of the License, or (at     *
* your option) any later version.                                             *
*                                                                             *
* This library is distributed in the hope that it will be useful, but WITHOUT *
* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or       *
* FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License *
* for more details.                                                           *
*                                                                             *
* You should have received a copy of the GNU Lesser General Public License    *
* along with this library; if not, write to the Free Software Foundation,     *
* Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301 USA.          *
*******************************************************************************
*                               SOFA :: Modules                               *
*                                                                             *
* Authors: The SOFA Team and external contributors (see Authors.txt)          *
*                                                                             *
* Contact information: contact@sofa-framework.org                             *
******************************************************************************/
#ifndef SOFA_COMPONENT_TOPOLOGY_TETRAHEDRONDATA_INL
#define SOFA_COMPONENT_TOPOLOGY_TETRAHEDRONDATA_INL

#include <sofa/component/topology/TetrahedronData.h>
#include <sofa/component/topology/TetrahedronSetTopologyChange.h>

namespace sofa
{

namespace component
{

namespace topology
{
	////////////////////////////////////////////////////////////////////////////////////////////////////////////
	////////////////////////////////////////implementation//////////////////////////////////////////////////////
	////////////////////////////////////////////////////////////////////////////////////////////////////////////

	template <typename T, typename Alloc>
	void TetrahedronData<T,Alloc>::handleTopologyEvents( std::list< const core::componentmodel::topology::TopologyChange *>::const_iterator changeIt, 
														std::list< const core::componentmodel::topology::TopologyChange *>::const_iterator &end ) 
	{
		while( changeIt != end )
		{
			core::componentmodel::topology::TopologyChangeType changeType = (*changeIt)->getChangeType();

			switch( changeType ) 
			{
			case core::componentmodel::topology::TETRAHEDRAADDED:
			{
				const TetrahedraAdded *ta = static_cast< const TetrahedraAdded * >( *changeIt );
				add( ta->getNbAddedTetrahedra(), ta->tetrahedronArray, ta->ancestorsList, ta->coefs );
				break;
			}
			case core::componentmodel::topology::TETRAHEDRAREMOVED:
			{
				const sofa::helper::vector<unsigned int> &tab = ( static_cast< const TetrahedraRemoved *>( *changeIt ) )->getArray();
				remove( tab );
				break;
			}
			default:
			// Ignore events that are not Tetrahedron or Point related.
			break;
			}; 

			++changeIt;
		} 
	}

	template <typename T, typename Alloc>
	void TetrahedronData<T,Alloc>::swap( unsigned int i1, unsigned int i2 ) 
	{
		sofa::helper::vector<T, Alloc>& data = *(this->beginEdit());

		T tmp = data[i1];
		data[i1] = data[i2];
		data[i2] = tmp;

		this->endEdit();
	}

	template <typename T, typename Alloc>
	void TetrahedronData<T,Alloc>::add( unsigned int nbTetrahedra, 
										const sofa::helper::vector< Tetrahedron >& tetrahedron, 
										const sofa::helper::vector< sofa::helper::vector< unsigned int > >& ancestors, 
										const sofa::helper::vector< sofa::helper::vector< double > >& coefs ) 
	{
		// Using default values
		sofa::helper::vector<T, Alloc>& data = *(this->beginEdit());
		unsigned int i0 = data.size();
		data.resize(i0+nbTetrahedra);
		for (unsigned int i = 0; i < nbTetrahedra; ++i)
		{
			T& t = data[i0+i];
			if (ancestors.empty() || coefs.empty())
			{
				const sofa::helper::vector< unsigned int > empty_vecint;
				const sofa::helper::vector< double > empty_vecdouble;
				m_createFunc(i0+i, m_createParam, t, tetrahedron[i], empty_vecint, empty_vecdouble);
			}
			else
				m_createFunc(i0+i, m_createParam, t, tetrahedron[i], ancestors[i], coefs[i] );
		}
		this->endEdit();
	}



	template <typename T, typename Alloc>
	void TetrahedronData<T,Alloc>::remove( const sofa::helper::vector<unsigned int> &index ) {

		sofa::helper::vector<T, Alloc>& data = *(this->beginEdit());

		unsigned int last = data.size() -1;

		for (unsigned int i = 0; i < index.size(); ++i)
		{
			m_destroyFunc( index[i], m_destroyParam, data[index[i]] );
			swap( index[i], last );
			--last;
		}

		data.resize( data.size() - index.size() );
	}



} // namespace topology

} // namespace component

} // namespace sofa

#endif // _TetrahedronDATA_INL_