/usr/share/doc-base/mmtl-manual is in python-mmtk 2.7.9-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 | Document: mmtl-manual
Title: Molecular Modelling Toolkit documentation manual
Author: Konrad Hinsen <konrad.hinsen@synchrotron-soleil.fr>
Abstract: mmtk_
Library for molecular simulation applications, which includes
.
+ construction of molecular systems, with special support for proteins
and nucleic acids
+ infinite systems or periodic boundary conditions (orthorhombic elementary cells)
+ common geometrical operations on coordinates
+ rigid-body fits
+ visualization using external PDB and VRML viewers; animation of dynamics
trajectories and normal modes
+ the AMBER 94 force field, with several options for handling electrostatic interactions
+ a deformation force field for fast normal mode calculations on proteins
+ energy minimization (steepest descent and conjugate gradient)
+ molecular dynamics (with optional thermostat, barostat, and distance constraints)
+ normal mode analysis
+ trajectory operations
+ point charge fits
+ molecular surface calculations
+ interfaces to other programs
Section: Text
Format: HTML
Index: /usr/share/doc/python-mmtk/html/index.html
Files: /usr/share/doc/python-mmtk/html/*
|