/usr/share/autodock/Tests/1pgp.gpf is in autodock-test 4.2.6-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 | npts 40 40 40 # num.grid points in xyz
parameter_file AD4_parameters.dat # force field default parm file
gridfld 1pgp_rec.maps.fld # grid_data_file
spacing 0.375 # spacing(A)
receptor_types A C HD N NA OA SA S P # receptor atom types
ligand_types C HD OA P # ligand atom type
receptor 1pgp_rec.pdbqt # macromolecule
gridcenter 23.5025 29.4514 39.7838 # xyz-coordinates or auto
# ligand 1pgp_lig.pdbqt # ligand
smooth 0.5 # store minimum energy w/in rad(A)
map 1pgp_rec.C.map # atom-specific affinity map
map 1pgp_rec.HD.map # atom-specific affinity map
map 1pgp_rec.OA.map # atom-specific affinity map
map 1pgp_rec.P.map # atom-specific affinity map
elecmap 1pgp_rec.e.map # electrostatic potential map
dsolvmap 1pgp_rec.d.map # desolvation potential map
dielectric -0.1465 # <0, distance-dep.diel;>0, constant
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