/etc/biomaj/general.conf is in biomaj 1.2.3-11.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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# Date : 31/03/2008 11:39:50
# File : General configuration
[DIRECTORIES]
#possibility to use an absolute path (begin by a char '/')
#otherwise the directory is relativ to BIOMAJ_ROOT
log.dir =/var/log/biomaj
log-biomaj.dir =/var/log/biomaj/biomaj-runtime
statefiles.dir =statefiles
workflows.dir =/etc/biomaj/db_properties
process.dir =/usr/share/biomaj/conf/process
webreport.dir =rapport
tmp.dir =/var/lib/biomaj/tmp
[APPLICATIONS]
uncompress.bin=tar,tar2,tar3,gunzip,bunzip,unzip
tar.bin=/bin/tar
tar.case=.tar.gz,.tgz,.tar.Z
tar.option.uncomp=-zxf
tar.option.output=-C
tar.option.test=-tzf
gunzip.bin=/bin/gunzip
gunzip.case=.gz,.Z
gunzip.option.uncomp=-f
gunzip.option.test=-t
tar2.bin=/bin/tar
tar2.case=.tar.bz2
tar2.option.uncomp=-jxf
tar2.option.output=-C
tar2.option.test=-tjf
bunzip.bin=/bin/bunzip2
bunzip.case=.bz2
bunzip.option.uncomp=-f
bunzip.option.output=-c
bunzip.option.test=-t
tar3.bin=/bin/tar
tar3.case=.tar
tar3.option.uncomp=-xf
tar3.option.output=-C
tar3.option.test=-tf
unzip.bin=/usr/bin/unzip
unzip.case=.zip
unzip.option.uncomp=-q
unzip.option.output=-d
unzip.option.test=-t
wget.bin=/usr/bin/wget
rsync.bin=/usr/bin/rsync
[ENGINE]
#Generation of general log in the directory ${log-biomaj.dir}
debug=false
#Generation of bank log in the directory ${log.dir}
bank.log=true
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