/usr/share/perl5/Globus/GRAM/JobDescription.pm is in globus-gram-job-manager-scripts 6.9-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 | #
# Globus::GRAM::JobDescription
#
# CVS Information
# $Source$
# $Date$
# $Revision$
# $Author$
use Globus::Core::Paths;
=head1 NAME
Globus::GRAM::JobDescription - GRAM Job Description
Globus::GRAM::DefaultHandlingJobDescription - GRAM Job Description with relative path handling
=head1 SYNOPSIS
use Globus::GRAM::JobDescription;
$hash = { executable => [ '/bin/echo' ], arguments => [ 'hello' ] };
$description = new Globus::GRAM::JobDescription($filename);
$description = new Globus::GRAM::JobDescription($hash);
$executable = $description->executable();
$description->add($new_attribute, $new_value);
$description->save();
$description->save($filename);
$description->print_recursive($file_handle);
=head1 DESCRIPTION
This object contains the parameters of a job request in a simple
object wrapper. The object may be queried to determine the value of
any RSL parameter, may be updated with new parameters, and may be saved
in the filesystem for later use.
=head2 Methods
=over 4
=cut
package Globus::GRAM::JobDescription;
=item new Globus::GRAM::JobDescription(I<$filename>)
A JobDescription is constructed from a
file consisting of a Perl hash of parameter => array mappings. Every
value in the Job Description is stored internally as an array, even single
literals, similar to the way an RSL tree is parsed in C. An example of such
a file is
$description =
{
executable => [ '/bin/echo' ],
arguments => [ 'hello', 'world' ],
environment => [
[
'GLOBUS_GRAM_JOB_CONTACT',
'https://globus.org:1234/2345/4332'
]
]
};
which corresponds to the rsl fragment
&(executable = /bin/echo)
(arguments = hello world)
(environment =
(GLOBUS_GRAM_JOB_CONTACT 'https://globus.org:1234/2345/4332')
)
When the library_path RSL attribute is specified, this object modifies
the environment RSL attribute value to append its value to any system specific
variables.
=cut
sub new
{
my $proto = shift;
my $class = ref($proto) || $proto;
my $desc = shift;
my $self = {};
if (defined ($desc))
{
if ( ref ( $desc ) eq "HASH" )
{
foreach my $Key ( keys %{$desc} )
{
$self->{$Key} = $desc->{$Key};
}
}
else
{
my $desc_fn = $desc;
$self = require "$desc_fn";
$self->{_description_file} = $desc_fn;
}
}
bless $self, $class;
if ($self->expand_globus_home()) {
my $home = (getpwuid($<))[7];
foreach my $key (keys %{$self}) {
if ($key =~ m/^[^_]/) {
my $arrayref = $self->{$key};
for ($i = 0; $i < scalar(@{$arrayref}); $i++) {
$arrayref->[$i] =~ s/\${GLOBUS_USER_HOME}/$home/g;
}
}
}
}
if ($self->expand_globus_location()) {
my $home;
if (exists $ENV{GLOBUS_LOCATION})
{
$home = $ENV{GLOBUS_LOCATION};
}
else
{
$home = $Globus::Core::Paths::exec_prefix;
}
foreach my $key (keys %{$self}) {
if ($key =~ m/^[^_]/) {
my $arrayref = $self->{$key};
for ($i = 0; $i < scalar(@{$arrayref}); $i++) {
$arrayref->[$i] =~ s/\${GLOBUS_LOCATION}/$home/g;
}
}
}
}
$self->fix_library_path_environment();
return $self;
}
=item $description->I<add>('name', I<$value>);
Add a parameter to a job description. The parameter will be normalized
internally so that the access methods described below will work with
this new parameter. As an example,
$description->add('new_attribute', $new_value)
will create a new attribute in the JobDescription, which can be accessed
by calling the I<$description->new_attribute>() method.
=cut
sub add
{
my $self = shift;
my $attr = shift;
my $value = shift;
$attr =~ s/_//g;
$attr = lc($attr);
if ( ref($value) eq 'ARRAY' ) {
$self->{$attr} = $value;
} else {
$self->{$attr} = [ $value ];
}
}
=item I<$value> $description->I<get>('name');
Get a parameter from a job description. As an example,
$description->get('attribute')
will return the appropriate attribute in the JobDescription by name.
=cut
sub get
{
my $self = shift;
my $attr = shift;
$attr =~ s/_//g;
$attr = lc($attr);
return $self->{$attr};
}
=item $description->I<save>([$filename])
Save the JobDescription, including any added parameters, to the file
named by $filename if present, or replacing the file used in constructing
the object.
=cut
sub save
{
my $self = shift;
my $filename = shift || "$self->{_description_file}.new";
local(*OUT); # protect
if ( open( OUT, '>' . $filename ) )
{
print OUT '$description = {', "\n";
foreach ( keys %{$self} )
{
print OUT ' \'', $_, '\' => ';
$self->print_recursive( \*OUT, $self->{$_} );
print OUT ",\n";
}
print OUT "};\n";
close(OUT);
} else {
# FIXME: what shall we do, if we cannot open the file?
}
if ( exists($self->{_description_file}) )
{
if ( $filename eq "$self->{_description_file}.new" )
{
rename("$self->{_description_file}.new",
$self->{_description_file});
}
}
return 0;
}
=item $description->I<print_recursive>($file_handle)
Write the value of the job description object to the file handle
specified in the argument list.
=cut
sub print_recursive
{
my $self = shift;
my $fh = shift; # with ..::File, \*FILE or *FILE{IO}
my $value = shift;
my $first = 1;
if ( ref($value) eq 'SCALAR' )
{
print $fh $value;
}
elsif(ref($value) eq 'ARRAY')
{
print $fh '[ ';
foreach (@{$value})
{
print $fh ', ' if (!$first);
$first = 0;
$self->print_recursive($fh, $_);
}
print $fh ' ]';
}
elsif(ref($value) eq 'HASH')
{
print $fh '(';
foreach (keys %{$value})
{
print $fh ', ' if (!$first);
$first = 0;
print $fh "'$_' => ";
$self->print_recursive($fh, $value->{$_});
}
print $fh ')';
}
elsif(!ref($value))
{
$value =~ s|'|\\'|g;
print $fh "'$value'";
}
return;
}
=item $description->I<parameter>()
For any parameter defined in the JobDescription can be accessed by calling
the method named by the parameter. The method names are automatically created
when the JobDescription is created, and may be invoked with arbitrary
SillyCaps or underscores. That is, the parameter gram_myjob may be accessed
by the GramMyJob, grammyjob, or gram_my_job method names (and others).
If the attributes does not in this object, then undef will be returned.
In a list context, this returns the list of values associated
with an attribute.
In a scalar context, if the attribute's value consist of a single literal,
then that literal will be returned, otherwise undef will be returned.
For example, from a JobDescription called $d constructed from a
description file containing
{
executable => [ '/bin/echo' ],
arguments => [ 'hello', 'world' ]
}
The following will hold:
$executable = $d->executable() # '/bin/echo'
$arguments = $d->arguments() # undef
@executable = $d->executable() # ('/bin/echo')
@arguments = $d->arguments() # ('hello', 'world')
$not_present = $d->not_present() # undef
@not_present = $d->not_present() # ()
To test for existence of a value:
@not_present = $d->not_present()
print "Not defined\n" if(!defined($not_present[0]));
=cut
sub trim($$) {
local($_) = shift; # the value
my $preset = shift; # hash ref
my $ch = substr($_,0,1);
if ( $ch eq '"' ) {
# value in dquotes
$_ = substr($_,1,-1);
} elsif ( $ch eq '\'' ) {
# value in squotes, no substitutions
return substr($_,1,-1);
} else {
# unquoted value, trim whitespaces
s/^\s+//;
s/\s+$//;
}
if ( ref($preset) eq 'HASH' ) {
# substitute $VAR variables, or keep $VAR
s/\$(\w+)/(exists $preset->{$1} ? $preset->{$1} : "\$$1")/egx;
# substitute ${VAR} variables, or keep ${VAR}
s/\$\{([^}]+)\}/(exists $preset->{$1} ? $preset->{$1} : "\${$1}")/egx;
}
# done
return $_;
}
# Simple helper function to process a single line from one of the OSG
# attributes files into a key-value pair. Returns (undef, undef) if the
# line is not valid.
sub parse_osg_attributes_line {
$_ = shift;
s/[\r\n]*$//; # safe chomp
s/\#.*$//; # remove comments
s/^\s+//; # remove initial whitespace
s/\s+$//; # remove trailing whitespace
# Reject lines that are empty, begin with 'export', or lack '='
if (($_ eq '') or m/^export/ or (index($_, '=') == -1)) {
return (undef, undef);
}
# split into only two parts at the first equals sign
# $k will become the variable name, and $v the raw value
return split(/=/, $_, 2);
}
# We override the autohandler for environment so we can tack on
# stuff from osg-attributes.conf
sub environment
{
my $self = shift;
local(*INFO);
# return if missing, part 1
return ( wantarray ? () : undef ) unless ref $self;
# slurp gridinfo file
my %result = (); # map key to value
if ( exists $self->{'_osg_info'} &&
ref($self->{'_osg_info'}) eq 'HASH' ) {
# use instance knowledge - avoid reading the file again
%result = %{ $self->{'_osg_info'} };
} else {
my %preset = ( %ENV ); # as meager as it may be
# PATH is no longer in the present environment, now that we don't use xinetd
$result{"PATH"} = "/bin:/usr/bin";
# no previous knowledge, need to read the file
my $fn = "/var/lib/osg/osg-job-environment.conf";
if ( open( INFO, "<$fn" ) ) {
my ($k,$v);
while ( <INFO> ) {
($k,$v) = parse_osg_attributes_line($_);
next unless defined $k;
# substitute and unquote the value, remember it
$result{$k} = $preset{$k} = trim( $v, \%preset );
}
close INFO;
}
# Now do the same thing for the "local" file
my $local_fn = "/var/lib/osg/osg-local-job-environment.conf";
if ( open( INFO, "<$local_fn" ) ) {
my ($k,$v);
while ( <INFO> ) {
($k,$v) = parse_osg_attributes_line($_);
next unless defined $k;
# substitute and unquote the value, remember it
$result{$k} = $preset{$k} = trim( $v, \%preset );
}
close INFO;
}
# remember for next invocation in this instance
# Note: If the file was unreadible, this is negative caching.
$self->{'_osg_info'} = { %result };
}
# return if missing, part 2
# this has been rewritten to not include job environments, if missing
# we still need to return the osg-attributes environment, though.
if ( exists $self->{environment} ) {
# merge with job/user environment (higher prio)
foreach my $t ( @{$self->{environment}} ) {
if(ref($t) && scalar(@$t) == 2) {
if (exists $result{$t->[0]}) {
delete($result{$t->[0]});
}
}
}
}
# Add our non-overridden variables to the environment list
foreach my $key ( keys %result ) {
push( @{$self->{environment}}, [ $key, $result{$key} ] );
}
# return in a way requested by caller
if ( wantarray ) {
return @{$self->{environment}};
} else {
my @result = @{$self->{environment}};
if ( @{$self->{environment}} == 1 && ! ref(${@{$self->environment}}[0]) ) {
return $result[0];
} else {
return undef;
}
}
}
sub AUTOLOAD
{
use vars qw($AUTOLOAD);
my $self = shift;
my $name = $AUTOLOAD;
$name =~ s/.*://;
$name =~ s/_//g;
$name = lc($name);
goto &environment
if $name eq "environment";
if((! ref($self)) ||(! exists($self->{$name})))
{
if(wantarray)
{
return ();
}
else
{
return undef;
}
}
if(wantarray)
{
# Return a list containing the contents of the value array for
# this attribute.
# This makes things like $description->environment() act as expected.
return @{$self->{$name}};
}
elsif(scalar(@{$self->{$name}}) == 1 && !ref($self->{$name}[0]))
{
# If there is only a single value in the value array for this
# attribute, return that value
# This makes things like $description->directory() act as expected.
return @{$self->{$name}}[0];
}
else
{
return undef;
}
}
# Internal method to merge the library_path RSL attribute and any values in the
# environment RSL attribute which explicitly name system library path variables.
# The result will be modifications to the environment RSL attribute value
# with the library_path values appended to any existing system-specific library
# path settings in the original RSL. For example
# if we found
# &(environment = (LD_LIBRARY_PATH foo))
# (library_path = bar)
# in the RSL, and LD_LIBRARY_PATH was one of the system-specific library paths
# for this OS, we'll modify the RSL to be
# &(environment = (LD_LIBRARY_PATH foo:bar))
# (library_path = bar)
#
# The $library_map values are mostly based on
# http://www.fortran-2000.com/ArnaudRecipes/sharedlib.html
# and also LD_LIBRARY_PATH for some popular BSDs
sub fix_library_path_environment
{
my $self = shift;
my @environment = $self->environment();
my $library_map = {
'linux' => [ 'LD_LIBRARY_PATH'],
'hpux' => [ 'SHLIB_PATH', 'LD_LIBRARY_PATH' ],
'solaris' => [ 'LD_LIBRARY_PATH', 'LD_LIBRARY_PATH_64' ],
'aix' => [ 'LIBPATH' ],
'irix' => [ 'LD_LIBRARY_PATH', 'LD_LIBRARYN32_PATH', 'LD_LIBRARY64_PATH' ],
'darwin' => [ 'DYLD_LIBRARY_PATH' ],
'freebsd' => [ 'LD_LIBRARY_PATH' ],
'openbsd' => [ 'LD_LIBRARY_PATH' ]
};
my $library_path = join(':', $self->library_path());
# Only bother doing anything if the library_path RSL attribute is
# present, and we know something about how the OS finds dynamic libraries
# $^O is The name of the operating system under which this copy of Perl
# was built
if ($library_path ne '' && exists($library_map->{$^O})) {
foreach my $var (@{$library_map->{$^O}}) {
# environment is an list of [ $name, $value ] pairs. This pulls
# out the value that matches the current OS-specific envvar name
my @libref = grep { $_->[0] eq $var } @environment;
if (exists $libref[0])
{
# user specified both environment=($var ...) and
# library_path=$library_path so we'll append $library_path
# to the corresponding environment variable definition
$libref[0]->[1] .= ":$library_path";
}
else
{
# user didn't specify both library_path and
# environment=($var $library_path), so we just add it to the
# environment
push(@environment, [$var, $library_path]);
}
}
# @environment is a list of references so modifications above will
# modify the RSL; however, if we add new references (the else case
# above), they won't be in the list in this object.
$self->add('environment', \@environment);
}
}
=back
=cut
package Globus::GRAM::DefaultHandlingJobDescription;
our @ISA = qw(Globus::GRAM::JobDescription);
sub directory
{
my $self = shift;
my $dir = $self->SUPER::directory();
if ($dir =~ m|^[^/]|)
{
$dir = "$ENV{HOME}/$dir";
}
return $dir;
}
sub executable
{
my $self = shift;
my $exe = $self->SUPER::executable();
if (ref($exe) || $exe =~ m|://|) {
return $exe;
}
if ($exe =~ m|^[^/]|)
{
$exe = $self->directory() . "/$exe";
}
return $exe;
}
sub stdin
{
my $self = shift;
my $stdin = $self->SUPER::stdin();
if (ref $stdin || $stdin =~ m|://|) {
return $stdin;
}
if ($stdin =~ m|^[^/]|)
{
$stdin = $self->directory() . "/$stdin";
}
return $stdin;
}
sub stdout
{
my $self = shift;
my @stdout = $self->SUPER::stdout();
if (scalar(@stdout) > 1 || ref($stdout[0])) {
return @stdout;
}
my $stdout = $stdout[0];
if (ref $stdout || $stdout =~ m|://|) {
return $stdout;
}
if ($stdout =~ m|^[^/]|)
{
$stdout = $self->directory() . "/$stdout";
}
return $stdout;
}
sub stderr
{
my $self = shift;
my @stderr = $self->SUPER::stderr();
if (scalar(@stderr) > 1 || ref($stderr[0])) {
return @stderr;
}
my $stderr = $stderr[0];
if (ref $stderr || $stderr =~ m|://|) {
return $stderr;
}
if ($stderr =~ m|^[^/]|)
{
$stderr = $self->directory() . "/$stderr";
}
return $stderr;
}
sub max_cpu_time
{
my $self = shift;
my $max_cpu_time = $self->SUPER::max_cpu_time();
if (! $max_cpu_time)
{
$max_cpu_time = $self->max_time();
}
$max_cpu_time = 0 if (! $max_cpu_time);
return $max_cpu_time;
}
sub max_wall_time
{
my $self = shift;
my $max_wall_time = $self->SUPER::max_wall_time();
if (! $max_wall_time)
{
$max_wall_time = $self->max_time();
}
$max_wall_time = 0 if (! $max_wall_time);
return $max_wall_time;
}
sub get($$)
{
my $self = shift;
my $name = shift;
$name =~ s/_//g;
$name = lc($name);
if ($name eq 'directory') {
return $self->directory();
} elsif ($name eq 'executable') {
return $self->executable();
} elsif ($name eq 'stdin') {
return $self->stdin();
} elsif ($name eq 'stdout') {
return $self->stdout();
} elsif ($name eq 'stderr') {
return $self->stderr();
} elsif ($name eq 'max_cpu_time') {
return $self->max_cpu_time();
} elsif ($name eq 'max_wall_time') {
return $self->max_wall_time();
} else {
return $self->SUPER::get($name);
}
}
1;
__END__
# vim: filetype=perl :
|