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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 | <html><head><meta http-equiv="Content-Type" content="text/html; charset=ISO-8859-1"><title>Image conversion</title><link rel="stylesheet" type="text/css" href="progref.css"><meta name="generator" content="DocBook XSL Stylesheets V1.79.1"><link rel="home" href="index.html" title="Mia Program Reference"><link rel="up" href="ch02.html" title="Chapter 2. Program Reference"><link rel="prev" href="ch02.html" title="Chapter 2. Program Reference"><link rel="next" href="Secmia2dimageselect.html" title="mia-2dimageselect"></head><body bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF"><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">Image conversion</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="ch02.html">Prev</a> </td><th width="60%" align="center">Chapter 2. Program Reference</th><td width="20%" align="right"> <a accesskey="n" href="Secmia2dimageselect.html">Next</a></td></tr></table><hr></div><div class="section"><div class="titlepage"><div><div><h2 class="title" style="clear: both"><a name="SecImageconversion"></a>Image conversion</h2></div></div></div><p class="sectiondescr">
</p><p class="sectiondescr">
The programs in this section are used to convert beteeen the supported image file formats, to combine
2D images to a 3D representation, or to extract 2D slices from 3D images.
Note, that for the conversion between pixel formats the programs <a class="xref" href="Secmia2dimagefilter.html" title="mia-2dimagefilter">mia-2dimagefilter</a>, and
<a class="xref" href="Secmia3dimagefilter.html" title="mia-3dimagefilter">mia-3dimagefilter</a>,
in conjunction with the corresponding plug-in
<a class="xref" href="SecPlugintype2dimagefilter.html#pluginconvert2dimagefilter" title="convert">convert:2dimage/filter</a>, respective
<a class="xref" href="SecPlugintype3dimagefilter.html#pluginconvert3dimagefilter" title="convert">convert:3dimage/filter</a> have to be used.
</p><p class="sectiondescr">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmia2dimageselect.html" title="mia-2dimageselect">mia-2dimageselect</a>
</p><p class="progdescr">This program is used to select one 2D images from a multi-image file.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmia2dmultiimageto3d.html" title="mia-2dmultiimageto3d">mia-2dmultiimageto3d</a>
</p><p class="progdescr">This program is used to convert a 2D multi-image file to a 3D image.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmia2dto3dimage.html" title="mia-2dto3dimage">mia-2dto3dimage</a>
</p><p class="progdescr">This program is used to combine a series of 2D images of equal size and type images following a certain numbering scheme to a 3D image.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmia2dto3dimageb.html" title="mia-2dto3dimageb">mia-2dto3dimageb</a>
</p><p class="progdescr">This program is used to convert a series 2D images into a 3D image. The 2D images are read as additional command line parameters and the slice ordering corresponds to the ordering of the file names on the commend line.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmia3dgetslice.html" title="mia-3dgetslice">mia-3dgetslice</a>
</p><p class="progdescr">This program is used to extract 2D slices from a 3D data set and store them in separate files. Output files will be numbered according to their slice index.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmia3dimageselect.html" title="mia-3dimageselect">mia-3dimageselect</a>
</p><p class="progdescr">This program is used to select one 3D images from a multi-image file.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmiaraw2image.html" title="mia-raw2image">mia-raw2image</a>
</p><p class="progdescr">This program is used to convert raw data to a 2D file format.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p><p class="sectiontoc">
<a class="xref" href="Secmiaraw2volume.html" title="mia-raw2volume">mia-raw2volume</a>
</p><p class="progdescr">This program is used to convert raw data into 3D images with apropriate metadata.</p><p class="sectiontoc">
</p><p class="sectiontoc">
</p></div><div class="navfooter"><hr><table width="100%" summary="Navigation footer"><tr><td width="40%" align="left"><a accesskey="p" href="ch02.html">Prev</a> </td><td width="20%" align="center"><a accesskey="u" href="ch02.html">Up</a></td><td width="40%" align="right"> <a accesskey="n" href="Secmia2dimageselect.html">Next</a></td></tr><tr><td width="40%" align="left" valign="top">Chapter 2. Program Reference </td><td width="20%" align="center"><a accesskey="h" href="index.html">Home</a></td><td width="40%" align="right" valign="top"> mia-2dimageselect</td></tr></table></div></body></html>
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