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1 2 3 4 5 6 7 | <html><head><meta http-equiv="Content-Type" content="text/html; charset=ISO-8859-1"><title>mia-2dimageregistration</title><link rel="stylesheet" type="text/css" href="progref.css"><meta name="generator" content="DocBook XSL Stylesheets V1.79.1"><link rel="home" href="index.html" title="Mia Program Reference"><link rel="up" href="SecRegistrationComparisonandTransformationof2Dimages.html" title="Registration, Comparison, and Transformation of 2D images"><link rel="prev" href="Secmia2dforce.html" title="mia-2dforce"><link rel="next" href="Secmia2dmultiforce.html" title="mia-2dmulti-force"></head><body bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF"><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">mia-2dimageregistration</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="Secmia2dforce.html">Prev</a> </td><th width="60%" align="center">Registration, Comparison, and Transformation of 2D images</th><td width="20%" align="right"> <a accesskey="n" href="Secmia2dmultiforce.html">Next</a></td></tr></table><hr></div><div class="section"><div class="titlepage"><div><div><h3 class="title"><a name="Secmia2dimageregistration"></a>mia-2dimageregistration</h3></div></div></div><h4><a name="idp3450"></a>Sysnopis:</h4><div class="cmdsynopsis"><p><code class="command">mia-2dimageregistration</code> {-i <em class="replaceable"><code>io</code></em>} {-r <em class="replaceable"><code>io</code></em>} {-t <em class="replaceable"><code>io</code></em>} [
<em class="replaceable"><code>options</code></em>
...] [
<em class="replaceable"><code>
<a class="xref" href="SecPlugintype2dimagefullcost.html" title="Plugin type: 2dimage/fullcost">Plugin type: 2dimage/fullcost</a>
</code></em>
...]</p></div><h4><a name="idp3464"></a>Description:</h4><p>This program runs registration of two images optimizing a transformation of the given transformation model by optimizing certain cost measures that are given as free parameters.</p><h4><a name="idp3466"></a>Options:</h4><h4><a name="idp3467"></a>File-IO</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">-i, --in-image=(input, required); io</span></dt><dd><p>test image to be registered. For supported file types see <a class="xref" href="SecPlugintype2dimageio.html" title="Plugin type: 2dimage/io">Plugin type: 2dimage/io</a></p></dd><dt><span class="term">-r, --ref-image=(input, required); io</span></dt><dd><p>reference image to be registered to. For supported file types see <a class="xref" href="SecPlugintype2dimageio.html" title="Plugin type: 2dimage/io">Plugin type: 2dimage/io</a></p></dd><dt><span class="term">-o, --out-image=(output); io</span></dt><dd><p>registered output image. For supported file types see <a class="xref" href="SecPlugintype2dimageio.html" title="Plugin type: 2dimage/io">Plugin type: 2dimage/io</a></p></dd><dt><span class="term">-t, --transformation=(output, required); io</span></dt><dd><p>output transformation comprising the registration. For supported file types see <a class="xref" href="SecPlugintype2dtransformio.html" title="Plugin type: 2dtransform/io">Plugin type: 2dtransform/io</a></p></dd></dl></div><h4><a name="idp3489"></a>Help & Info</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">-V, --verbose=warning; dict</span></dt><dd><p>verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:</p><div class="informaltable"><table class="informaltable" border="0"><colgroup><col class="c1"><col class="c2"></colgroup><tbody><tr><td align="left" valign="top">info:</td><td align="left" valign="top">Low level messages</td></tr><tr><td align="left" valign="top">trace:</td><td align="left" valign="top">Function call trace</td></tr><tr><td align="left" valign="top">fail:</td><td align="left" valign="top">Report test failures</td></tr><tr><td align="left" valign="top">warning:</td><td align="left" valign="top">Warnings</td></tr><tr><td align="left" valign="top">error:</td><td align="left" valign="top">Report errors</td></tr><tr><td align="left" valign="top">debug:</td><td align="left" valign="top">Debug output</td></tr><tr><td align="left" valign="top">message:</td><td align="left" valign="top">Normal messages</td></tr><tr><td align="left" valign="top">fatal:</td><td align="left" valign="top">Report only fatal errors</td></tr></tbody></table></div></dd><dt><span class="term">--copyright=(); bool</span></dt><dd><p>print copyright information</p></dd><dt><span class="term">-h, --help=(); bool</span></dt><dd><p>print this help</p></dd><dt><span class="term">-?, --usage=(); bool</span></dt><dd><p>print a short help</p></dd><dt><span class="term">--version=(); bool</span></dt><dd><p>print the version number and exit</p></dd></dl></div><h4><a name="idp3540"></a>Parameters</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">-l, --levels=3; ulong</span></dt><dd><p>multi-resolution levelsmulti-resolution levels</p></dd><dt><span class="term">-O, --optimizer=gsl:opt=gd,step=0.1; factory</span></dt><dd><p>Optimizer used for minimizationOptimizer used for minimization. For supported plug-ins see <a class="xref" href="SecPlugintypeminimizersinglecost.html" title="Plugin type: minimizer/singlecost">Plugin type: minimizer/singlecost</a></p></dd><dt><span class="term">-R, --refiner=</span></dt><dd><p>optimizer used for refinement after the main optimizer was calledoptimizer used for refinement after the main optimizer was called. For supported plug-ins see <a class="xref" href="SecPlugintypeminimizersinglecost.html" title="Plugin type: minimizer/singlecost">Plugin type: minimizer/singlecost</a></p></dd><dt><span class="term">-f, --transForm=spline; factory</span></dt><dd><p>transformation typetransformation type. For supported plug-ins see <a class="xref" href="SecPlugintype2dimagetransform.html" title="Plugin type: 2dimage/transform">Plugin type: 2dimage/transform</a></p></dd></dl></div><h4><a name="idp3561"></a>Processing</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">--threads=-1; int</span></dt><dd><p>Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).</p></dd></dl></div><h4><a name="idp3567"></a>Example:</h4><p>Register the image 'moving.png' to the image 'reference.png' by using a rigid transformation model and ssd as cost function. Write the result to output.png</p><pre class="screen">mia-2dimageregistration -i moving.png -r reference.png -o output.png -f rigid image:cost=ssd</pre><h4><a name="idp3570"></a>Author(s):</h4><p>Gert Wollny</p></div><div class="navfooter"><hr><table width="100%" summary="Navigation footer"><tr><td width="40%" align="left"><a accesskey="p" href="Secmia2dforce.html">Prev</a> </td><td width="20%" align="center"><a accesskey="u" href="SecRegistrationComparisonandTransformationof2Dimages.html">Up</a></td><td width="40%" align="right"> <a accesskey="n" href="Secmia2dmultiforce.html">Next</a></td></tr><tr><td width="40%" align="left" valign="top">mia-2dforce </td><td width="20%" align="center"><a accesskey="h" href="index.html">Home</a></td><td width="40%" align="right" valign="top"> mia-2dmulti-force</td></tr></table></div></body></html>
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