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1 2 3 4 5 6 7 8 9 | <html><head><meta http-equiv="Content-Type" content="text/html; charset=ISO-8859-1"><title>mia-2dmultiimageregistration</title><link rel="stylesheet" type="text/css" href="progref.css"><meta name="generator" content="DocBook XSL Stylesheets V1.79.1"><link rel="home" href="index.html" title="Mia Program Reference"><link rel="up" href="SecRegistrationComparisonandTransformationof2Dimages.html" title="Registration, Comparison, and Transformation of 2D images"><link rel="prev" href="Secmia2dmultiforce.html" title="mia-2dmulti-force"><link rel="next" href="Secmia2dtransform.html" title="mia-2dtransform"></head><body bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF"><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">mia-2dmultiimageregistration</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="Secmia2dmultiforce.html">Prev</a> </td><th width="60%" align="center">Registration, Comparison, and Transformation of 2D images</th><td width="20%" align="right"> <a accesskey="n" href="Secmia2dtransform.html">Next</a></td></tr></table><hr></div><div class="section"><div class="titlepage"><div><div><h3 class="title"><a name="Secmia2dmultiimageregistration"></a>mia-2dmultiimageregistration</h3></div></div></div><h4><a name="idp3657"></a>Sysnopis:</h4><div class="cmdsynopsis"><p><code class="command">mia-2dmultiimageregistration</code> {-o <em class="replaceable"><code>io</code></em>} [
<em class="replaceable"><code>options</code></em>
...] [
<em class="replaceable"><code>
<a class="xref" href="SecPlugintype2dimagefullcost.html" title="Plugin type: 2dimage/fullcost">Plugin type: 2dimage/fullcost</a>
</code></em>
...]</p></div><h4><a name="idp3667"></a>Description:</h4><p>This program runs a non-rigid registration based on the given cost criteria and a given transformation model. Other than mia-2dnonrigidreg it doesn't support specific command line parameters to provide the images. Instead the images are specified dirctly when defining the cost function. Hence, image registrations can be executed that optimize the aligmnet of more than one image pair at the same time. Note, however, that all input images must be of the same dimension (in pixels)</p><h4><a name="idp3669"></a>Options:</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">-o, --out-transform=(output, required); io</span></dt><dd><p>output transformation. For supported file types see <a class="xref" href="SecPlugintype2dtransformio.html" title="Plugin type: 2dtransform/io">Plugin type: 2dtransform/io</a></p></dd><dt><span class="term">-l, --levels=3; ulong</span></dt><dd><p>multi-resolution levelsmulti-resolution levels</p></dd><dt><span class="term">-O, --optimizer=gsl:opt=gd,step=0.1; factory</span></dt><dd><p>Optimizer used for minimizationOptimizer used for minimization. For supported plug-ins see <a class="xref" href="SecPlugintypeminimizersinglecost.html" title="Plugin type: minimizer/singlecost">Plugin type: minimizer/singlecost</a></p></dd><dt><span class="term">-f, --transForm=spline:rate=10,penalty=divcurl; factory</span></dt><dd><p>transformation typetransformation type. For supported plug-ins see <a class="xref" href="SecPlugintype2dimagetransform.html" title="Plugin type: 2dimage/transform">Plugin type: 2dimage/transform</a></p></dd></dl></div><h4><a name="idp3690"></a>Help & Info</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">-V, --verbose=warning; dict</span></dt><dd><p>verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:</p><div class="informaltable"><table class="informaltable" border="0"><colgroup><col class="c1"><col class="c2"></colgroup><tbody><tr><td align="left" valign="top">info:</td><td align="left" valign="top">Low level messages</td></tr><tr><td align="left" valign="top">trace:</td><td align="left" valign="top">Function call trace</td></tr><tr><td align="left" valign="top">fail:</td><td align="left" valign="top">Report test failures</td></tr><tr><td align="left" valign="top">warning:</td><td align="left" valign="top">Warnings</td></tr><tr><td align="left" valign="top">error:</td><td align="left" valign="top">Report errors</td></tr><tr><td align="left" valign="top">debug:</td><td align="left" valign="top">Debug output</td></tr><tr><td align="left" valign="top">message:</td><td align="left" valign="top">Normal messages</td></tr><tr><td align="left" valign="top">fatal:</td><td align="left" valign="top">Report only fatal errors</td></tr></tbody></table></div></dd><dt><span class="term">--copyright=(); bool</span></dt><dd><p>print copyright information</p></dd><dt><span class="term">-h, --help=(); bool</span></dt><dd><p>print this help</p></dd><dt><span class="term">-?, --usage=(); bool</span></dt><dd><p>print a short help</p></dd><dt><span class="term">--version=(); bool</span></dt><dd><p>print the version number and exit</p></dd></dl></div><h4><a name="idp3741"></a>Processing</h4><div class="variablelist"><dl class="variablelist compact"><dt><span class="term">--threads=-1; int</span></dt><dd><p>Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).</p></dd></dl></div><h4><a name="idp3747"></a>Example:</h4><p>Register image test.v to image ref.v by using a spline transformation with a coefficient rate of 5 and write the registered image to reg.v. Use two multiresolution levels, ssd as image cost function and divcurl weighted by 10.0 as transformation smoothness penalty. The resulting transformation is saved in reg.vf.</p><pre class="screen">mia-2dmultiimageregistration -o reg.vf -l 2
-f spline:rate=3,penalty=divcurl
image:cost=ssd,src=test.v,ref=ref.v</pre><h4><a name="idp3750"></a>Author(s):</h4><p>Gert Wollny</p></div><div class="navfooter"><hr><table width="100%" summary="Navigation footer"><tr><td width="40%" align="left"><a accesskey="p" href="Secmia2dmultiforce.html">Prev</a> </td><td width="20%" align="center"><a accesskey="u" href="SecRegistrationComparisonandTransformationof2Dimages.html">Up</a></td><td width="40%" align="right"> <a accesskey="n" href="Secmia2dtransform.html">Next</a></td></tr><tr><td width="40%" align="left" valign="top">mia-2dmulti-force </td><td width="20%" align="center"><a accesskey="h" href="index.html">Home</a></td><td width="40%" align="right" valign="top"> mia-2dtransform</td></tr></table></div></body></html>
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