This file is indexed.

/usr/lib/python2.7/dist-packages/csb/test/data/1nz9A.frags is in python-csb 1.2.3+dfsg-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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 position:            1 neighbors:            1

 1nz9 A     1 A L    0.000  112.130  179.977    0.000
 1nz9 A     2 Q L -134.597  155.738  179.916    0.000
 1nz9 A     3 V L -143.771  148.819 -179.986    0.000
 1nz9 A     4 A L  -86.179  -44.448 -179.977    0.000
 1nz9 A     5 F L -151.432  157.481  179.946    0.000
 1nz9 A     6 R L -150.513  134.103  179.981    0.000
 1nz9 A     7 E L  -58.233  147.798 -179.882    0.000
 1nz9 A     8 G L   79.541    6.522 -179.989    0.000
 1nz9 A     9 D L  -86.869  174.534  179.959    0.000
 1nz9 A    10 Q L -113.960  132.607 -179.950    0.000

 position:            6 neighbors:            1

 1nz9 A     6 R L -150.513  134.103  179.981    0.000
 1nz9 A     7 E L  -58.233  147.798 -179.882    0.000
 1nz9 A     8 G L   79.541    6.522 -179.989    0.000
 1nz9 A     9 D L  -86.869  174.534  179.959    0.000
 1nz9 A    10 Q L -113.960  132.607 -179.950    0.000
 1nz9 A    11 V L -131.901  136.198  179.915    0.000
 1nz9 A    12 R L  -80.030  166.265 -179.985    0.000
 1nz9 A    13 V L  -79.855  167.337 -179.201    0.000
 1nz9 A    14 V L  -79.313  -60.298 -179.542    0.000
 1nz9 A    15 S L -160.425 -164.178 -179.951    0.000

 position:           11 neighbors:            1

 1nz9 A    11 V L -131.901  136.198  179.915    0.000
 1nz9 A    12 R L  -80.030  166.265 -179.985    0.000
 1nz9 A    13 V L  -79.855  167.337 -179.201    0.000
 1nz9 A    14 V L  -79.313  -60.298 -179.542    0.000
 1nz9 A    15 S L -160.425 -164.178 -179.951    0.000
 1nz9 A    16 G L   77.366 -168.013  179.593    0.000
 1nz9 A    17 P L  -60.374  -19.016  179.933    0.000
 1nz9 A    18 F L  -95.855   13.091 -179.361    0.000
 1nz9 A    19 A L  -79.136   39.692  179.336    0.000
 1nz9 A    20 D L -160.702   34.873 -179.986    0.000

 position:           16 neighbors:            1

 1nz9 A    16 G L   77.366 -168.013  179.593    0.000
 1nz9 A    17 P L  -60.374  -19.016  179.933    0.000
 1nz9 A    18 F L  -95.855   13.091 -179.361    0.000
 1nz9 A    19 A L  -79.136   39.692  179.336    0.000
 1nz9 A    20 D L -160.702   34.873 -179.986    0.000
 1nz9 A    21 F L -148.003  167.131  179.888    0.000
 1nz9 A    22 T L -127.158 -173.979 -179.963    0.000
 1nz9 A    23 G L -150.426  164.811 -179.999    0.000
 1nz9 A    24 T L -103.992  108.474 -179.996    0.000
 1nz9 A    25 V L  -57.418  113.884  179.985    0.000

 position:           21 neighbors:            1

 1nz9 A    21 F L -148.003  167.131  179.888    0.000
 1nz9 A    22 T L -127.158 -173.979 -179.963    0.000
 1nz9 A    23 G L -150.426  164.811 -179.999    0.000
 1nz9 A    24 T L -103.992  108.474 -179.996    0.000
 1nz9 A    25 V L  -57.418  113.884  179.985    0.000
 1nz9 A    26 T L  -98.876  -33.916  179.895    0.000
 1nz9 A    27 E L -153.483  158.479  179.975    0.000
 1nz9 A    28 I L -129.880  158.690 -179.997    0.000
 1nz9 A    29 N L -135.295   86.706  179.938    0.000
 1nz9 A    30 P L  -71.694  -34.126 -179.928    0.000

 position:           26 neighbors:            1

 1nz9 A    26 T L  -98.876  -33.916  179.895    0.000
 1nz9 A    27 E L -153.483  158.479  179.975    0.000
 1nz9 A    28 I L -129.880  158.690 -179.997    0.000
 1nz9 A    29 N L -135.295   86.706  179.938    0.000
 1nz9 A    30 P L  -71.694  -34.126 -179.928    0.000
 1nz9 A    31 E L  -58.984  -33.552 -179.959    0.000
 1nz9 A    32 R L -110.233  -61.226 -179.937    0.000
 1nz9 A    33 G L  127.040   42.732 -179.996    0.000
 1nz9 A    34 K L -115.588  170.344  179.961    0.000
 1nz9 A    35 V L -155.367  137.079  179.998    0.000

 position:           31 neighbors:            1

 1nz9 A    31 E L  -58.984  -33.552 -179.959    0.000
 1nz9 A    32 R L -110.233  -61.226 -179.937    0.000
 1nz9 A    33 G L  127.040   42.732 -179.996    0.000
 1nz9 A    34 K L -115.588  170.344  179.961    0.000
 1nz9 A    35 V L -155.367  137.079  179.998    0.000
 1nz9 A    36 K L -114.688  128.253 -179.986    0.000
 1nz9 A    37 V L -139.876  142.506  179.883    0.000
 1nz9 A    38 M L  -89.925  104.020 -179.791    0.000
 1nz9 A    39 V L  -91.762  171.108  179.934    0.000
 1nz9 A    40 T L -132.415  115.344 -179.976    0.000

 position:           36 neighbors:            1

 1nz9 A    36 K L -114.688  128.253 -179.986    0.000
 1nz9 A    37 V L -139.876  142.506  179.883    0.000
 1nz9 A    38 M L  -89.925  104.020 -179.791    0.000
 1nz9 A    39 V L  -91.762  171.108  179.934    0.000
 1nz9 A    40 T L -132.415  115.344 -179.976    0.000
 1nz9 A    41 I L -120.233  133.825  179.963    0.000
 1nz9 A    42 F L   61.736   30.418  179.965    0.000
 1nz9 A    43 G L   70.276   45.256 -179.931    0.000
 1nz9 A    44 R L -159.979  138.860  179.979    0.000
 1nz9 A    45 E L  -60.803  151.942 -179.994    0.000

 position:           41 neighbors:            1

 1nz9 A    41 I L -120.233  133.825  179.963    0.000
 1nz9 A    42 F L   61.736   30.418  179.965    0.000
 1nz9 A    43 G L   70.276   45.256 -179.931    0.000
 1nz9 A    44 R L -159.979  138.860  179.979    0.000
 1nz9 A    45 E L  -60.803  151.942 -179.994    0.000
 1nz9 A    46 T L -160.015   91.165  179.949    0.000
 1nz9 A    47 P L  -68.372  117.453 -179.998    0.000
 1nz9 A    48 V L -132.835  154.984  179.741    0.000
 1nz9 A    49 E L  -98.797  138.100 -179.796    0.000
 1nz9 A    50 L L -144.335 -162.203  178.424    0.000

 position:           46 neighbors:            1

 1nz9 A    46 T L -160.015   91.165  179.949    0.000
 1nz9 A    47 P L  -68.372  117.453 -179.998    0.000
 1nz9 A    48 V L -132.835  154.984  179.741    0.000
 1nz9 A    49 E L  -98.797  138.100 -179.796    0.000
 1nz9 A    50 L L -144.335 -162.203  178.424    0.000
 1nz9 A    51 D L -153.110  156.707 -179.714    0.000
 1nz9 A    52 F L  -45.858  -29.377 -179.493    0.000
 1nz9 A    53 S L  -76.012   -3.453 -179.846    0.000
 1nz9 A    54 Q L -131.768   15.076  179.869    0.000
 1nz9 A    55 V L -142.001  170.027 -179.926    0.000

 position:           51 neighbors:            1

 1nz9 A    51 D L -153.110  156.707 -179.714    0.000
 1nz9 A    52 F L  -45.858  -29.377 -179.493    0.000
 1nz9 A    53 S L  -76.012   -3.453 -179.846    0.000
 1nz9 A    54 Q L -131.768   15.076  179.869    0.000
 1nz9 A    55 V L -142.001  170.027 -179.926    0.000
 1nz9 A    56 V L -142.412  146.709 -179.953    0.000
 1nz9 A    57 K L  -83.362  131.334 -179.997    0.000
 1nz9 A    58 A L -125.576    0.000    0.000    0.000

 position:           56 neighbors:            1

 1nz9 A    56 V L -142.412  146.709 -179.953    0.000
 1nz9 A    57 K L  -83.362  131.334 -179.997    0.000
 1nz9 A    58 A L -125.576    0.000    0.000    0.000