/usr/lib/python2.7/dist-packages/dicom/test/test

# test_dataset.py
"""unittest cases for dicom.dataset module"""
# Copyright (c) 2008-2012 Darcy Mason
# This file is part of pydicom, released under a modified MIT license.
#    See the file license.txt included with this distribution, also
#    available at http://pydicom.googlecode.com

import unittest
from dicom.dataset import Dataset, PropertyError
from dicom.dataelem import DataElement, RawDataElement
from dicom.tag import Tag
from dicom.sequence import Sequence
from dicom import in_py3


class DatasetTests(unittest.TestCase):
    def failUnlessRaises(self, excClass, callableObj, *args, **kwargs):
        """Redefine unittest Exception test to return the exception object"""
        # from http://stackoverflow.com/questions/88325/
        # how-do-i-unit-test-an-init-method-of-a-python-class-with-assertraises
        try:
            callableObj(*args, **kwargs)
        except excClass as excObj:
            return excObj  # Actually return the exception object
        else:
            if hasattr(excClass, '__name__'):
                excName = excClass.__name__
            else:
                excName = str(excClass)
            raise self.failureException("{0:s} not raised".format(excName))

    def failUnlessExceptionArgs(self, start_args, excClass, callableObj):
        """Check the expected args were returned from an exception
        start_args -- a string with the start of the expected message
        """
        if in_py3:
            with self.assertRaises(excClass) as cm:
                callableObj()

            excObj = cm.exception
        else:
            excObj = self.failUnlessRaises(excClass, callableObj)

        msg = "\nExpected Exception message:\n" + start_args
        msg += "\nGot:\n" + excObj.args[0]
        self.assertTrue(excObj.args[0].startswith(start_args), msg)

    def testAttributeErrorInProperty(self):
        """Dataset: AttributeError in property raises actual error message.."""
        # This comes from bug fix for issue 42
        # First, fake enough to try the pixel_array property
        ds = Dataset()
        ds.file_meta = Dataset()
        ds.PixelData = 'xyzlmnop'

        def callable_pixel_array():
            ds.pixel_array

        attribute_error_msg = "AttributeError in pixel_array property: " + \
            "Dataset does not have attribute 'TransferSyntaxUID'"
        self.failUnlessExceptionArgs(attribute_error_msg,
                                     PropertyError, callable_pixel_array)

    def testTagExceptionPrint(self):
        # When printing datasets, a tag number should appear in error
        # messages
        ds = Dataset()
        ds.PatientID = "123456" # Valid value
        ds.SmallestImagePixelValue = 0 # Invalid value

        expected_msg = "Invalid tag (0028, 0106): object of type 'int' has no len()"

        self.failUnlessExceptionArgs(expected_msg, TypeError, lambda: str(ds))

    def testTagExceptionWalk(self):
        # When recursing through dataset, a tag number should appear in
        # error messages
        ds = Dataset()
        ds.PatientID = "123456" # Valid value
        ds.SmallestImagePixelValue = 0 # Invalid value

        expected_msg = "Invalid tag (0028, 0106): object of type 'int' has no len()"

        callback = lambda dataset, data_element: str(data_element)
        func = lambda: ds.walk(callback)

        self.failUnlessExceptionArgs(expected_msg, TypeError, func)

    def dummy_dataset(self):
        # This dataset is used by many of the tests
        ds = Dataset()
        ds.add_new((0x300a, 0x00b2), "SH", "unit001")  # TreatmentMachineName
        return ds

    def testSetNewDataElementByName(self):
        """Dataset: set new data_element by name............................"""
        ds = Dataset()
        ds.TreatmentMachineName = "unit #1"
        data_element = ds[0x300a, 0x00b2]
        self.assertEqual(data_element.value, "unit #1",
                         "Unable to set data_element by name")
        self.assertEqual(data_element.VR, "SH",
                         "data_element not the expected VR")

    def testSetExistingDataElementByName(self):
        """Dataset: set existing data_element by name......................."""
        ds = self.dummy_dataset()
        ds.TreatmentMachineName = "unit999"  # change existing value
        self.assertEqual(ds[0x300a, 0x00b2].value, "unit999")

    def testSetNonDicom(self):
        """Dataset: can set class instance property (non-dicom)............."""
        ds = Dataset()
        ds.SomeVariableName = 42
        has_it = hasattr(ds, 'SomeVariableName')
        self.assertTrue(has_it, "Variable did not get created")
        if has_it:
            self.assertEqual(ds.SomeVariableName, 42, "There, but wrong value")

    def testMembership(self):
        """Dataset: can test if item present by 'if <name> in dataset'......"""
        ds = self.dummy_dataset()
        self.assertTrue('TreatmentMachineName' in ds, "membership test failed")
        self.assertTrue('Dummyname' not in ds, "non-member tested as member")

    def testContains(self):
        """Dataset: can test if item present by 'if <tag> in dataset'......."""
        ds = self.dummy_dataset()
        self.assertTrue((0x300a, 0xb2) in ds, "membership test failed")
        self.assertTrue([0x300a, 0xb2] in ds,
                        "membership test failed when list used")
        self.assertTrue(0x300a00b2 in ds, "membership test failed")
        self.assertTrue(not (0x10, 0x5f) in ds, "non-member tested as member")

    def testGetExists1(self):
        """Dataset: dataset.get() returns an existing item by name.........."""
        ds = self.dummy_dataset()
        unit = ds.get('TreatmentMachineName', None)
        self.assertEqual(unit, 'unit001',
                         "dataset.get() did not return existing member by name")

    def testGetExists2(self):
        """Dataset: dataset.get() returns an existing item by long tag......"""
        ds = self.dummy_dataset()
        unit = ds.get(0x300A00B2, None).value
        self.assertEqual(unit, 'unit001',
                         "dataset.get() did not return existing member by long tag")

    def testGetExists3(self):
        """Dataset: dataset.get() returns an existing item by tuple tag....."""
        ds = self.dummy_dataset()
        unit = ds.get((0x300A, 0x00B2), None).value
        self.assertEqual(unit, 'unit001',
                         "dataset.get() did not return existing member by tuple tag")

    def testGetExists4(self):
        """Dataset: dataset.get() returns an existing item by Tag..........."""
        ds = self.dummy_dataset()
        unit = ds.get(Tag(0x300A00B2), None).value
        self.assertEqual(unit, 'unit001',
                         "dataset.get() did not return existing member by tuple tag")

    def testGetDefault1(self):
        """Dataset: dataset.get() returns default for non-existing name ...."""
        ds = self.dummy_dataset()
        not_there = ds.get('NotAMember', "not-there")
        msg = ("dataset.get() did not return default value "
               "for non-member by name")

        self.assertEqual(not_there, "not-there", msg)

    def testGetDefault2(self):
        """Dataset: dataset.get() returns default for non-existing tuple tag"""
        ds = self.dummy_dataset()
        not_there = ds.get((0x9999, 0x9999), "not-there")
        msg = ("dataset.get() did not return default value"
               " for non-member by tuple tag")
        self.assertEqual(not_there, "not-there", msg)

    def testGetDefault3(self):
        """Dataset: dataset.get() returns default for non-existing long tag."""
        ds = self.dummy_dataset()
        not_there = ds.get(0x99999999, "not-there")
        msg = ("dataset.get() did not return default value"
               " for non-member by long tag")
        self.assertEqual(not_there, "not-there", msg)

    def testGetDefault4(self):
        """Dataset: dataset.get() returns default for non-existing Tag......"""
        ds = self.dummy_dataset()
        not_there = ds.get(Tag(0x99999999), "not-there")
        msg = ("dataset.get() did not return default value"
               " for non-member by Tag")
        self.assertEqual(not_there, "not-there", msg)

    def testGetFromRaw(self):
        """Dataset: get(tag) returns same object as ds[tag] for raw element."""
        # This came from issue 88, where get(tag#) returned a RawDataElement,
        #     while get(name) converted to a true DataElement
        test_tag = 0x100010
        test_elem = RawDataElement(Tag(test_tag), 'PN', 4, b'test',
                                   0, True, True)
        ds = Dataset({Tag(test_tag): test_elem})
        by_get = ds.get(test_tag)
        by_item = ds[test_tag]

        msg = ("Dataset.get() returned different objects for ds.get(tag) "
               "and ds[tag]:\nBy get():%r\nBy ds[tag]:%r\n")
        self.assertEqual(by_get, by_item, msg % (by_get, by_item))

    def test__setitem__(self):
        """Dataset: if set an item, it must be a DataElement instance......."""
        def callSet():
            # common error - set data_element instead of data_element.value
            ds[0x300a, 0xb2] = "unit1"

        ds = Dataset()
        self.assertRaises(TypeError, callSet)

    def test_matching_tags(self):
        """Dataset: key and data_element.tag mismatch raises ValueError....."""
        def set_wrong_tag():
            ds[0x10, 0x10] = data_element
        ds = Dataset()
        data_element = DataElement((0x300a, 0x00b2), "SH", "unit001")
        self.assertRaises(ValueError, set_wrong_tag)

    def test_NamedMemberUpdated(self):
        """Dataset: if set data_element by tag, name also reflects change..."""
        ds = self.dummy_dataset()
        ds[0x300a, 0xb2].value = "moon_unit"
        self.assertEqual(ds.TreatmentMachineName, 'moon_unit',
                         "Member not updated")

    def testUpdate(self):
        """Dataset: update() method works with tag or name.................."""
        ds = self.dummy_dataset()
        pat_data_element = DataElement((0x10, 0x12), 'PN', 'Johnny')
        ds.update({'PatientName': 'John', (0x10, 0x12): pat_data_element})
        self.assertEqual(ds[0x10, 0x10].value, 'John',
                         "named data_element not set")
        self.assertEqual(ds[0x10, 0x12].value, 'Johnny', "set by tag failed")

    def testDir(self):
        """Dataset: dir() returns sorted list of named data_elements........"""
        ds = self.dummy_dataset()
        ds.PatientName = "name"
        ds.PatientID = "id"
        ds.NonDicomVariable = "junk"
        ds.add_new((0x18, 0x1151), "IS", 150)  # X-ray Tube Current
        ds.add_new((0x1111, 0x123), "DS", "42.0")  # private - no name in dir()
        expected = ['PatientID', 'PatientName', 'TreatmentMachineName',
                    'XRayTubeCurrent']
        self.assertEqual(ds.dir(), expected,
                         "dir() returned %s, expected %s" % (str(ds.dir()), str(expected)))

    def testDeleteDicomAttr(self):
        """Dataset: delete DICOM attribute by name.........................."""
        def testAttribute():
            ds.TreatmentMachineName

        ds = self.dummy_dataset()
        del ds.TreatmentMachineName
        self.assertRaises(AttributeError, testAttribute)

    def testDeleteOtherAttr(self):
        """Dataset: delete non-DICOM attribute by name......................"""
        ds = self.dummy_dataset()
        ds.meaningoflife = 42
        del ds.meaningoflife

    def testDeleteDicomAttrWeDontHave(self):
        """Dataset: try delete of missing DICOM attribute..................."""
        def try_delete():
            del ds.PatientName
        ds = self.dummy_dataset()
        self.assertRaises(AttributeError, try_delete)

    def testDeleteItemLong(self):
        """Dataset: delete item by tag number (long)..................."""
        ds = self.dummy_dataset()
        del ds[0x300a00b2]

    def testDeleteItemTuple(self):
        """Dataset: delete item by tag number (tuple).................."""
        ds = self.dummy_dataset()
        del ds[0x300a, 0x00b2]

    def testDeleteNonExistingItem(self):
        """Dataset: raise KeyError for non-existing item delete........"""
        ds = self.dummy_dataset()

        def try_delete():
            del ds[0x10, 0x10]
        self.assertRaises(KeyError, try_delete)


class DatasetElementsTests(unittest.TestCase):
    """Test valid assignments of data elements"""
    def setUp(self):
        self.ds = Dataset()
        self.sub_ds1 = Dataset()
        self.sub_ds2 = Dataset()

    def testSequenceAssignment(self):
        """Assignment to SQ works only if valid Sequence assigned......"""
        def try_non_Sequence():
            self.ds.ConceptCodeSequence = [1, 2, 3]
        msg = "Assigning non-sequence to SQ data element did not raise error"
        self.assertRaises(TypeError, try_non_Sequence, msg=msg)
        # check also that assigning proper sequence *does* work
        self.ds.ConceptCodeSequence = [self.sub_ds1, self.sub_ds2]
        self.assertTrue(isinstance(self.ds.ConceptCodeSequence, Sequence),
                        "Sequence assignment did not result in Sequence type")


if __name__ == "__main__":
    unittest.main()
python-dicom 0.9.9-2 / usr / lib / python2.7 / dist-packages / dicom / test / test_dataset.py
