/usr/lib/python3/dist-packages/csb/test/cases/bio/io/whatif/__init__.py is in python3-csb 1.2.3+dfsg-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 | import csb.test as test
from csb.bio.io.whatif import WhatCheckParser
@test.functional
class TestWhatCheckParser(test.Case):
def setUp(self):
super(TestWhatCheckParser, self).setUp()
self.file = self.config.getTestFile('pdbout.txt')
self.parser = WhatCheckParser()
def testParse(self):
res = self.parser.parse(self.file)
self.assertEqual(res['rama_z_score'], -4.617)
self.assertEqual(res['bb_z_score'], -1.421)
self.assertEqual(res['1st_packing_z_score'], -3.436)
self.assertEqual(res['2nd_packing_z_score'], -4.424)
self.assertEqual(res['rotamer_score'], -2.103)
if __name__ == '__main__':
test.Console()
|