/usr/lib/R/site-library/geneplotter/NAMESPACE is in r-bioc-geneplotter 1.52.0-2.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 | ## import(methods)
importClassesFrom(methods, character, list, matrix, missing, oldClass)
importClassesFrom(Biobase, ExpressionSet)
importMethodsFrom(annotate, chromLengths, chromLocs, chromNames,
geneSymbols, organism, probesToChrom)
importMethodsFrom(AnnotationDbi, colnames, exists, get, mget, ncol,
nrow, sample)
importMethodsFrom(Biobase, annotation, contents, esApply, exprs,
featureNames)
importMethodsFrom(BiocGenerics, plotMA)
importFrom(annotate, getAnnMap, usedChromGenes)
importFrom(Biobase, addVigs2WinMenu, multiassign)
importFrom(graphics, abline, axis, barplot, boxplot, bxp, hist, image,
lines, matplot, mtext, par, plot, plot.new, segments,
strheight, title)
importFrom(grDevices, colorRampPalette, dev.copy, dev.off, pdf, png,
postscript, rgb)
importFrom(grid, convertUnit, gpar, grid.rect, grid.text, stringWidth, unit)
importFrom(RColorBrewer, brewer.pal)
importFrom(stats, approx, density, ecdf, lowess, mad, median, quantile, sd)
importFrom(utils, data)
export(alongChrom,
cColor, cPlot, cScale,
dChip.colors,
greenred.colors, GetColor,
plotChr, plotExpressionGraph,
make.chromOrd,
savepng, savepdf, saveeps, savetiff,
histStack, groupedHeatmap,
openHtmlPage, closeHtmlPage,
multiecdf, multidensity)
exportMethods(imageMap, Makesense, plotMA)
S3method(multiecdf, formula)
S3method(multiecdf, matrix)
S3method(multiecdf, list)
S3method(multiecdf, data.frame)
S3method(multidensity, formula)
S3method(multidensity, matrix)
S3method(multidensity, list)
S3method(multidensity, data.frame)
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