/usr/share/SBMLToolbox/isBindingInstalled.m is in sbmltoolbox 4.1.0-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 | function installed = isBindingInstalled()
% installed = isBindingInstalled()
%
% Returns
%
% 1. installed =
% - 1 if the libSBML executables are installed
% - 0 otherwise
%
%
%<!---------------------------------------------------------------------------
% This file is part of SBMLToolbox. Please visit http://sbml.org for more
% information about SBML, and the latest version of SBMLToolbox.
%
% Copyright (C) 2009-2012 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. EMBL European Bioinformatics Institute (EBML-EBI), Hinxton, UK
%
% Copyright (C) 2006-2008 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. University of Hertfordshire, Hatfield, UK
%
% Copyright (C) 2003-2005 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. Japan Science and Technology Agency, Japan
% 3. University of Hertfordshire, Hatfield, UK
%
% SBMLToolbox is free software; you can redistribute it and/or modify it
% under the terms of the GNU Lesser General Public License as published by
% the Free Software Foundation. A copy of the license agreement is provided
% in the file named "LICENSE.txt" included with this software distribution.
%----------------------------------------------------------------------- -->
installed = 1;
if (~exist('OCTAVE_VERSION'))
filename = fullfile(tempdir, 'test.xml');
outFile = fullfile(tempdir, 'test-out.xml');
else
if isWindows()
filename = fullfile(pwd, 'test.xml');
outFile = [tempdir, 'temp', filesep, 'test-out.xml'];
else
filename = fullfile(pwd, 'test.xml');
outFile = [tempdir, 'test-out.xml'];
end;
end;
writeTempFile(filename);
try
M = TranslateSBML(filename);
catch
installed = 0;
return;
end;
if (installed == 1)
try
OutputSBML(M, outFile, 1);
catch
installed = 0;
return;
end;
end;
delete(filename);
delete(outFile);
%
%
% Is this windows
% Mac OS X 10.7 Lion returns true for a call to ispc()
% since we were using that to distinguish between windows and macs we need
% to catch this
% ------------------------------------------------------------------------
function y = isWindows()
y = 1;
if isunix()
y = 0;
return;
end;
if ismac()
y = 0;
return;
end;
if ~ispc()
message = sprintf('\n%s\n%s\n', ...
'Unable to determine the type of operating system in use.', ...
'Please contact libsbml-team@caltech.edu to help resolve this problem.');
error(message);
end;
% write out a temporary file
function writeTempFile(filename)
fout = fopen(filename, 'w');
fprintf(fout, '<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n');
fprintf(fout, '<sbml xmlns=\"http://www.sbml.org/sbml/level3/version1/core\" ');
fprintf(fout, 'level=\"3\" version=\"1\">\n');
fprintf(fout, ' <model/>\n</sbml>\n');
fclose(fout);
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