/usr/share/staden/etc/NOTEDB is in staden-common 2.0.0+b11-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 | comment: id=COMM: fg=black: bg=blue
"info line": \
id=INFO:\
dt="Only have one note of this type.
It will be displayed in the information line of the contig editor."
"database open": \
id="OPEN":\
dt="# This note will be executed whenever this database is opened.
# It may be used for adding .gaprc style defaults so that these may be
# attached to the database itself. The .gaprc files from $HOME and the current
# directory will still be read, however definitions here take priority."
"database close": \
id="CLOS": \
dt="puts Closing"
#
# The RAWDATA environment variable
#
rawdata: id="RAWD"
#
# Used to specify a reference sequence
#
"reference sequence": \
id="REFS": bg="#e8e0e8": \
dt="# REFERENCE: sequence_id length offset\n"
"reference trace": \
id="REFT": fg=red: gf="#707000": \
dt="# REFERENCE: sequence_id length offset\n"
#
# FAKE to indicate consensus, etc. These should be excluded from
# strand calculations, etc.
#
"Fake (eg consensus)": id="FAKE": bg=orange
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