This file is indexed.

/usr/include/casacore/lattices/Lattices/MaskedLatticeIterator.h is in casacore-dev 2.2.0-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
//# MaskedLatticeIterator.h: Iterators for Masked Lattices: readonly
//# Copyright (C) 2003
//# Associated Universities, Inc. Washington DC, USA.
//#
//# This library is free software; you can redistribute it and/or modify it
//# under the terms of the GNU Library General Public License as published by
//# the Free Software Foundation; either version 2 of the License, or (at your
//# option) any later version.
//#
//# This library is distributed in the hope that it will be useful, but WITHOUT
//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
//# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
//# License for more details.
//#
//# You should have received a copy of the GNU Library General Public License
//# along with this library; if not, write to the Free Software Foundation,
//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
//#
//# Correspondence concerning AIPS++ should be addressed as follows:
//#        Internet email: aips2-request@nrao.edu.
//#        Postal address: AIPS++ Project Office
//#                        National Radio Astronomy Observatory
//#                        520 Edgemont Road
//#                        Charlottesville, VA 22903-2475 USA
//#
//# $Id$

#ifndef LATTICES_MASKEDLATTICEITERATOR_H
#define LATTICES_MASKEDLATTICEITERATOR_H

//# Includes
#include <casacore/casa/aips.h>
#include <casacore/lattices/Lattices/MaskedLattice.h>
#include <casacore/lattices/Lattices/LatticeIterator.h>
#include <casacore/casa/Utilities/CountedPtr.h>


namespace casacore { //# NAMESPACE CASACORE - BEGIN

// <summary>
// A readonly iterator for masked Lattices.
// </summary>

// <use visibility=export>

// <reviewed reviewer="" date="" tests="tMaskedLatticeIterator.cc">
// </reviewed>

// <prerequisite>
//   <li> <linkto class="MaskedLattice">MaskedLattice</linkto>
//   <li> <linkto class="RO_LatticeIterator">RO_LatticeIterator</linkto>
// </prerequisite>

// <etymology>
// The leading "RO" is shorthand for "readonly", which indicates that an
// RO_MaskedLatticeIterator is used for traversing a masked lattice,
// examining and possibly extracting its contents, but not for modifying it.
// </etymology>

// <synopsis> 
// This class provides a convenient way to traverse any class derived from
// MaskedLattice. It is derived from class
// <linkto class=RO_LatticeIterator>RO_LatticeIterator</linkto>, so it
// provides the same iterator capabilities.
// On top of that it offers the function <src>getMask</src> to get the
// contents of the mask at the current iterator position.
//
// In principle, iteration through a MaskedLattice can be done as:
// <srcblock>
// void someFunc (const MaskedLattice<Float>& lattice)
// {
//   RO_LatticeIterator<Float> iter(lattice);
//   Array<Bool> mask;
//   while (! iter.atEnd()) {
//     const Array<Float>& array = iter.cursor();
//     lattice.getMaskSlice (mask, iter.position(), array.shape());
//     iter++;
//   }
// }
// </srcblock>
// Using a MaskedLatticeIterator makes getting the mask slightly more
// convenient.
// <srcblock>
// void someFunc (const MaskedLattice<Float>& lattice)
// {
//   RO_MaskedLatticeIterator<Float> iter(lattice);
//   Array<Bool> mask;
//   while (! iter.atEnd()) {
//     const Array<Float>& array = iter.cursor();
//     iter.getMask (mask);
//     iter++;
//   }
// }
// </srcblock>
// However, the most important reason to use MaskedLatticeIterator is
// performance. If the underlying lattice is a LatticeExpr object,
// the expression will be evaluated twice if a LatticeIterator object
// is used. The reason is that the lattice in the LatticeIterator is
// a different object from the lattice object used to get the mask.
// Hence, the optimization put in LatticeExpr is not used.
// When using a MaskedLatticeIterator the same lattice object is used
// to get data and mask.
// </synopsis>

// <motivation>
// The performance gain for LatticeExpr was the most important reason
// to develop this class.
// </motivation>

//# <todo asof="2003/11/10">
//#  <li>
//# </todo>


template<class T> class RO_MaskedLatticeIterator: public RO_LatticeIterator<T>
{
  //# Make members of parent class known.
public:
  using RO_LatticeIterator<T>::isNull;
  using RO_LatticeIterator<T>::position;
  using RO_LatticeIterator<T>::endPosition;
  using RO_LatticeIterator<T>::cursorShape;

public:
  // The default constructor creates an empty object which is practically
  // unusable.
  // It can only be used as the source or target of an assignment. It can
  // also be used as the source for the copy constructor and the copy function.
  // Other functions do not check if the object is empty and will usually
  // give a segmentation fault.
  // The function isNull() can be used to test if the object is empty.
  RO_MaskedLatticeIterator();

  // Construct the Iterator with the supplied data.
  // It uses a TileStepper as the default iteration strategy.
  // useRef=True means that if possible the cursor arrays returned
  // reference the data in the underlying lattice. This is only possible
  // for ArrayLattice objects (or e.g. a SubLattice using it).
  explicit RO_MaskedLatticeIterator (const MaskedLattice<T>& data,
				     Bool useRef=True);

  // Construct the Iterator with the supplied data, and iteration strategy
  RO_MaskedLatticeIterator (const MaskedLattice<T>& data,
			    const LatticeNavigator& method,
			    Bool useRef=True);

  // Construct the Iterator with the supplied data.
  // It uses a LatticeStepper with the supplied cursor shape as the
  // iteration strategy.
  RO_MaskedLatticeIterator (const MaskedLattice<T>& data,
			    const IPosition& cursorShape,
			    Bool useRef=True);

  // The copy constructor uses reference semantics (ie. NO real copy is made).
  // The function <src>copy</src> can be used to make a true copy.
  RO_MaskedLatticeIterator (const RO_MaskedLatticeIterator<T>& other);
 
  // Destructor (cleans up dangling references and releases memory)
  ~RO_MaskedLatticeIterator();

  // Assignment uses reference semantics (ie. NO real copy is made).
  // The function <src>copy</src> can be used to make a true copy.
  RO_MaskedLatticeIterator<T>& operator= (const RO_MaskedLatticeIterator<T>&);

  // Make a copy of the iterator object.
  // This means that an independent navigator object is created to
  // be able to iterate independently through the same MaskedLattice.
  // The position in the copied navigator is the same as the original.
  // The reset function has to be used to start at the beginning.
  // <br>Note that if the MaskedLattice uses a cache (e.g. PagedArray), the
  // cache is shared by the iterators.
  RO_MaskedLatticeIterator<T> copy() const;

  // Return the underlying MaskedLattice object.
  MaskedLattice<T>& lattice() const
    { return const_cast<MaskedLattice<T>&>(*itsMaskLattPtr); }

  // Is the underlying MaskedLattice really masked?
  Bool isMasked() const
    { return itsMaskLattPtr->isMasked(); }

  // Get the mask for the current position.
  // It returns the same flag as
  // <linkto class=MaskedLattice>MaskedLattice::getMaskSlice</linkto>.
  // <group>
  Bool getMask (COWPtr<Array<Bool> >&, Bool removeDegenerateAxes=False) const;
  Bool getMask (Array<Bool>&, Bool removeDegenerateAxes=False) const;
  Array<Bool> getMask (Bool removeDegenerateAxes=False) const;
  // </group>

private:
  // Construct from a LatticeIterator (for copy function).
  RO_MaskedLatticeIterator (const RO_LatticeIterator<T>&,
			    const RO_MaskedLatticeIterator<T>&);

  // Fill the pointer with a pointer to the masked lattice.
  // This pointer is a casted copy of the lattice pointer in the base class.
  // In this way they share the same MaskedLattice object, which is needed
  // for optimal performance of e.g. LatticeExpr.
  // Otherwise getting data from the lattice and from the mask would
  // result in 2 evaluations of the expression.
  // However, the lattice can be a PagedArray (for example, for PagedImage).
  // In that case a clone of the original MaskedLattice is used.
  void fillPtr (const MaskedLattice<T>& mlattice);

  CountedPtr<MaskedLattice<T> > itsMaskLattPtr;
};



} //# NAMESPACE CASACORE - END

#ifndef CASACORE_NO_AUTO_TEMPLATES
#include <casacore/lattices/Lattices/MaskedLatticeIterator.tcc>
#endif //# CASACORE_NO_AUTO_TEMPLATES
#endif