About

This package is 140.3 KB. It is available at http://ftp.debian.org/debian/pool/main/g/giira/giira_0.0.20140625-1_amd64.deb .

View its full control file here: debian/control.

Description

RNA-Seq driven gene finding incorporating ambiguous reads

Relations

This package depends on: libglpk-java, glpk-utils, bowtie2, tophat.

This package does not recommend any other package.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

giira 0.0.20140625-1 is in debian - stretch / main. This package's architecture is: amd64.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/giira text/x-shellscript root:root 0o755 82 bytes
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/giira/ root:root 0o755
/usr/share/doc/giira/changelog.Debian.gz application/gzip root:root 0o644 474 bytes
/usr/share/doc/giira/copyright text/plain root:root 0o644 1.0 KB
/usr/share/doc/giira/README.Debian text/plain root:root 0o644 800 bytes
/usr/share/doc/giira/README.test text/plain root:root 0o644 375 bytes
/usr/share/giira/ root:root 0o755
/usr/share/giira/scripts/ root:root 0o755
/usr/share/giira/scripts/bwa_aln.py text/plain root:root 0o644 1001 bytes
/usr/share/giira/scripts/bwa_index.py text/plain root:root 0o644 635 bytes
/usr/share/giira/scripts/bwa_samse.py text/plain root:root 0o644 1.1 KB
/usr/share/giira/scripts/bwa_sw.py text/plain root:root 0o644 1.1 KB
/usr/share/giira/scripts/callCat.py text/plain root:root 0o644 557 bytes
/usr/share/giira/scripts/callCat_RnaFile.py text/plain root:root 0o644 530 bytes
/usr/share/giira/scripts/filterGenes.py text/troff root:root 0o644 2.3 KB
/usr/share/giira/scripts/getMeanCov.py text/plain root:root 0o644 2.9 KB
/usr/share/giira/scripts/lpCall.py text/troff root:root 0o644 270 bytes
/usr/share/giira/scripts/sortReaSam.py text/plain root:root 0o644 765 bytes
/usr/share/java/ root:root 0o755
/usr/share/java/giira-0.0.20140625.jar application/java-archive root:root 0o644 134.6 KB
/usr/share/java/giira.jar root:root 0o777
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/giira.1.gz application/gzip root:root 0o644 1.4 KB