/usr/include/BALL/VIEW/MODELS/surfaceModel.h is in libballview1.4-dev 1.4.3~beta1-3.
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// vi: set ts=2:
//
// $Id: surfaceModel.h,v 1.16 2005/12/23 17:02:18 amoll Exp $
//
#ifndef BALL_VIEW_MODELS_SURFACEMODEL_H
#define BALL_VIEW_MODELS_SURFACEMODEL_H
#ifndef BALL_VIEW_MODELS_MODELPROCESSOR_H
# include <BALL/VIEW/MODELS/modelProcessor.h>
#endif
#ifndef BALL_STRUCTURE_SURFACEPROCESSOR_H
# include <BALL/STRUCTURE/surfaceProcessor.h>
#endif
namespace BALL
{
class Atom;
namespace VIEW
{
/** AddSurfaceModel class.
The class AddSurfaceModel is a model processor that creates a surface model
of the given Composite object.
A Mesh object is created and filled with the method SurfaceProcessor::getSurface.
The surface can be either a solvent excluded surface (SES, default) or the
solvent accesible surface (SAS). See SurfaceProcessor for details.
\see Mesh
\see SurfaceProcessor
\ingroup ViewModels
*/
class BALL_VIEW_EXPORT AddSurfaceModel
: public ModelProcessor
{
public:
BALL_CREATE(AddSurfaceModel)
/** @name Constructors and Destructor
*/
//@{
/// Default Constructor.
AddSurfaceModel();
/// Copy constructor.
AddSurfaceModel(const AddSurfaceModel& add_surface_model);
/// Destructor.
virtual ~AddSurfaceModel();
/** Explicit default initialization.
Calls ModelProcessor::clear.
*/
virtual void clear();
///
virtual void clearComposites();
//@}
/** @name Accessors
*/
//{
/// Return the surface type (SES/SAS)
SurfaceProcessor::SurfaceType getType() const { return type_; }
/// Set the surface type (SES/SAS)
void setType(SurfaceProcessor::SurfaceType type) { type_ = type; }
//}
/** @name Processor specific methods
*/
//@{
/** Operator method.
This method stores all Composite objects. In the finish()
method for all stored start composite a Mesh object will be created.
The resulting Representation is named after the first processed Composite.
\param composite the Composite object that will be processed
\return Processor::Result the result
*/
virtual Processor::Result operator() (Composite& composite);
//@}
/** @name debuggers and diagnostics
*/
//@{
/** Internal value dump.
Dump the current state to the output ostream with a given dumping depth.
Calls ModelProcessor::dump.
\param s output stream where to output the state
\param depth the dumping depth
*/
virtual void dump(std::ostream& s = std::cout, Size depth = 0) const;
///
void setProbeRadius(float radius)
{ probe_radius_ = radius;}
///
float getProbeRadius() const
{ return probe_radius_;}
///
virtual bool createGeometricObjects();
private:
HashSet<Atom*> atoms_;
SurfaceProcessor::SurfaceType type_;
float probe_radius_;
};
} // namespace VIEW
} // namespace BALL
#endif // BALL_VIEW_MODELS_SURFACEMODEL_H
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