/usr/include/pbseq/alignment/simulator/ContextSet.hpp is in libblasr-dev 0~20161219-1.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | #ifndef _SIMULATOR_CONTEXT_SET_HPP_
#define _SIMULATOR_CONTEXT_SET_HPP_
#include <map>
#include <iostream>
#include "ContextSample.hpp"
typedef std::map<std::string, ContextSample*> T_ContextSampleMap;
class ContextSampleMap : public T_ContextSampleMap {
public:
int contextLength;
ContextSampleMap();
void Write(std::ofstream &out);
void Read(std::ifstream &in);
};
#endif
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