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/usr/ is in libbpp-phyl-dev 2.2.0-1+b1.

This file is owned by root:root, with mode 0o755.

File Mime Type Owner Mode Size
..
/usr/include/Bpp/Phyl/ root:root 0o755
/usr/include/ root:root 0o755
/usr/include/Bpp/ root:root 0o755
/usr/include/Bpp/Phyl/AncestralStateReconstruction.h text/x-c root:root 0o644 3.6 KB
/usr/include/Bpp/Phyl/App/ root:root 0o755
/usr/include/Bpp/Phyl/App/PhylogeneticsApplicationTools.h text/x-c root:root 0o644 29.3 KB
/usr/include/Bpp/Phyl/BipartitionList.h text/x-c root:root 0o644 8.0 KB
/usr/include/Bpp/Phyl/BipartitionTools.h text/x-c++ root:root 0o644 6.4 KB
/usr/include/Bpp/Phyl/Distance/ root:root 0o755
/usr/include/Bpp/Phyl/Distance/AbstractAgglomerativeDistanceMethod.h text/x-c root:root 0o644 7.5 KB
/usr/include/Bpp/Phyl/Distance/BioNJ.h text/x-c++ root:root 0o644 3.8 KB
/usr/include/Bpp/Phyl/Distance/DistanceEstimation.h text/x-c root:root 0o644 19.2 KB
/usr/include/Bpp/Phyl/Distance/DistanceMethod.h text/x-c root:root 0o644 3.3 KB
/usr/include/Bpp/Phyl/Distance/HierarchicalClustering.h text/x-c++ root:root 0o644 3.9 KB
/usr/include/Bpp/Phyl/Distance/NeighborJoining.h text/x-c root:root 0o644 4.1 KB
/usr/include/Bpp/Phyl/Model/Codon/ root:root 0o755
/usr/include/Bpp/Phyl/Distance/PGMA.h text/x-c++ root:root 0o644 4.0 KB
/usr/include/Bpp/Phyl/Graphics/ root:root 0o755
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/usr/include/Bpp/Phyl/Graphics/AbstractTreeDrawing.h text/x-c root:root 0o644 12.4 KB
/usr/include/Bpp/Phyl/Graphics/CladogramPlot.h text/x-c root:root 0o644 3.4 KB
/usr/include/Bpp/Phyl/Graphics/PhylogramPlot.h text/x-c root:root 0o644 3.3 KB
/usr/include/Bpp/Phyl/Graphics/TreeDrawing.h text/x-c++ root:root 0o644 11.6 KB
/usr/include/Bpp/Phyl/Graphics/TreeDrawingDisplayControler.h text/x-c root:root 0o644 6.5 KB
/usr/include/Bpp/Phyl/Graphics/TreeDrawingListener.h text/x-c++ root:root 0o644 8.7 KB
/usr/include/Bpp/Phyl/Io/ root:root 0o755
/usr/include/Bpp/Phyl/Io/BppOFrequenciesSetFormat.h text/x-c++ root:root 0o644 4.4 KB
/usr/include/Bpp/Phyl/Io/BppORateDistributionFormat.h text/x-c++ root:root 0o644 3.1 KB
/usr/include/Bpp/Phyl/Io/BppOSubstitutionModelFormat.h text/x-c++ root:root 0o644 7.2 KB
/usr/include/Bpp/Phyl/Io/IoDistanceMatrix.h text/x-c root:root 0o644 4.9 KB
/usr/include/Bpp/Phyl/Io/IoDistanceMatrixFactory.h text/x-c++ root:root 0o644 3.5 KB
/usr/include/Bpp/Phyl/Io/IoFrequenciesSet.h text/x-c root:root 0o644 4.2 KB
/usr/include/Bpp/Phyl/Io/IoFrequenciesSetFactory.h text/x-c++ root:root 0o644 3.2 KB
/usr/include/Bpp/Phyl/Io/IoPairedSiteLikelihoods.h text/x-c++ root:root 0o644 4.2 KB
/usr/include/Bpp/Phyl/Io/IoSubstitutionModel.h text/x-c root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Io/IoSubstitutionModelFactory.h text/x-c++ root:root 0o644 3.2 KB
/usr/include/Bpp/Phyl/Io/IoTree.h text/x-c root:root 0o644 7.5 KB
/usr/include/Bpp/Phyl/Io/IoTreeFactory.h text/x-c++ root:root 0o644 3.0 KB
/usr/include/Bpp/Phyl/Io/Newick.h text/x-c root:root 0o644 5.9 KB
/usr/include/Bpp/Phyl/Io/NexusIoTree.h text/x-c root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Io/Nhx.h text/x-c root:root 0o644 8.4 KB
/usr/include/Bpp/Phyl/Io/PhylipDistanceMatrixFormat.h text/x-c root:root 0o644 3.0 KB
/usr/include/Bpp/Phyl/Likelihood/ root:root 0o755
/usr/include/Bpp/Phyl/Likelihood/AbstractDiscreteRatesAcrossSitesTreeLikelihood.h text/x-c root:root 0o644 5.1 KB
/usr/include/Bpp/Phyl/Likelihood/AbstractHomogeneousTreeLikelihood.h text/x-c root:root 0o644 9.1 KB
/usr/include/Bpp/Phyl/Likelihood/AbstractNonHomogeneousTreeLikelihood.h text/x-c root:root 0o644 10.0 KB
/usr/include/Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h text/x-c root:root 0o644 10.0 KB
/usr/include/Bpp/Phyl/Likelihood/AbstractTreeLikelihoodData.h text/x-c root:root 0o644 4.7 KB
/usr/include/Bpp/Phyl/Likelihood/ClockTreeLikelihood.h text/x-c root:root 0o644 2.8 KB
/usr/include/Bpp/Phyl/Likelihood/DRASDRTreeLikelihoodData.h text/x-c root:root 0o644 14.3 KB
/usr/include/Bpp/Phyl/Likelihood/DRASRTreeLikelihoodData.h text/x-c root:root 0o644 10.7 KB
/usr/include/Bpp/Phyl/Likelihood/DRHomogeneousMixedTreeLikelihood.h text/x-c++ root:root 0o644 7.3 KB
/usr/include/Bpp/Phyl/Likelihood/DRHomogeneousTreeLikelihood.h text/x-c root:root 0o644 12.1 KB
/usr/include/Bpp/Phyl/Likelihood/DRNonHomogeneousTreeLikelihood.h text/x-c root:root 0o644 12.4 KB
/usr/include/Bpp/Phyl/Likelihood/DRTreeLikelihood.h text/x-c root:root 0o644 3.9 KB
/usr/include/Bpp/Phyl/Likelihood/DRTreeLikelihoodTools.h text/x-c root:root 0o644 3.2 KB
/usr/include/Bpp/Phyl/Likelihood/DiscreteRatesAcrossSitesTreeLikelihood.h text/x-c root:root 0o644 7.3 KB
/usr/include/Bpp/Phyl/Likelihood/GlobalClockTreeLikelihoodFunctionWrapper.h text/x-c root:root 0o644 4.0 KB
/usr/include/Bpp/Phyl/Likelihood/HomogeneousTreeLikelihood.h text/x-c root:root 0o644 3.3 KB
/usr/include/Bpp/Phyl/Likelihood/MarginalAncestralStateReconstruction.h text/x-c root:root 0o644 7.1 KB
/usr/include/Bpp/Phyl/Likelihood/NNIHomogeneousTreeLikelihood.h text/x-c++ root:root 0o644 8.4 KB
/usr/include/Bpp/Phyl/Likelihood/NonHomogeneousTreeLikelihood.h text/x-c root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Likelihood/PairedSiteLikelihoods.h text/x-c++ root:root 0o644 6.1 KB
/usr/include/Bpp/Phyl/Likelihood/PseudoNewtonOptimizer.h text/x-c root:root 0o644 4.2 KB
/usr/include/Bpp/Phyl/Likelihood/RASTools.h text/x-c root:root 0o644 2.5 KB
/usr/include/Bpp/Phyl/Likelihood/RHomogeneousClockTreeLikelihood.h text/x-c root:root 0o644 6.3 KB
/usr/include/Bpp/Phyl/Likelihood/RHomogeneousMixedTreeLikelihood.h text/x-c++ root:root 0o644 7.2 KB
/usr/include/Bpp/Phyl/Likelihood/RHomogeneousTreeLikelihood.h text/x-c root:root 0o644 10.9 KB
/usr/include/Bpp/Phyl/Mapping/Reward.h text/x-c root:root 0o644 6.4 KB
/usr/include/Bpp/Phyl/Likelihood/RNonHomogeneousMixedTreeLikelihood.h text/x-c++ root:root 0o644 10.0 KB
/usr/include/Bpp/Phyl/Likelihood/RNonHomogeneousTreeLikelihood.h text/x-c root:root 0o644 11.3 KB
/usr/include/Bpp/Phyl/Likelihood/SitePartitionTreeLikelihood.h text/x-c root:root 0o644 3.3 KB
/usr/include/Bpp/Phyl/Likelihood/TreeLikelihood.h text/x-c root:root 0o644 13.7 KB
/usr/include/Bpp/Phyl/Likelihood/TreeLikelihoodData.h text/x-c root:root 0o644 4.3 KB
/usr/include/Bpp/Phyl/Likelihood/TreeLikelihoodTools.h text/x-c root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Mapping/ root:root 0o755
/usr/include/Bpp/Phyl/Mapping/DecompositionReward.h text/x-c++ root:root 0o644 4.4 KB
/usr/include/Bpp/Phyl/Mapping/DecompositionSubstitutionCount.h text/x-c root:root 0o644 5.0 KB
/usr/include/Bpp/Phyl/Mapping/LaplaceSubstitutionCount.h text/x-c root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Mapping/Mapping.h text/x-c root:root 0o644 7.1 KB
/usr/include/Bpp/Phyl/Mapping/NaiveSubstitutionCount.h text/x-c root:root 0o644 6.5 KB
/usr/include/Bpp/Phyl/Mapping/OneJumpSubstitutionCount.h text/x-c root:root 0o644 4.1 KB
/usr/include/Bpp/Phyl/Mapping/ProbabilisticRewardMapping.h text/x-c root:root 0o644 5.3 KB
/usr/include/Bpp/Phyl/Model/Protein/ root:root 0o755
/usr/include/Bpp/Phyl/Mapping/ProbabilisticSubstitutionMapping.h text/x-c root:root 0o644 6.5 KB
/usr/include/Bpp/Phyl/Model/RateDistribution/ root:root 0o755
/usr/include/Bpp/Phyl/Mapping/RewardMapping.h text/x-c++ root:root 0o644 3.2 KB
/usr/include/Bpp/Phyl/Mapping/RewardMappingTools.h text/x-c++ root:root 0o644 4.7 KB
/usr/include/Bpp/Phyl/Mapping/SubstitutionCount.h text/x-c root:root 0o644 8.0 KB
/usr/include/Bpp/Phyl/Mapping/SubstitutionMapping.h text/x-c++ root:root 0o644 3.7 KB
/usr/include/Bpp/Phyl/Mapping/SubstitutionMappingTools.h text/x-c++ root:root 0o644 17.6 KB
/usr/include/Bpp/Phyl/Mapping/SubstitutionRegister.h text/x-c++ root:root 0o644 29.7 KB
/usr/include/Bpp/Phyl/Mapping/UniformizationSubstitutionCount.h text/x-c++ root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Mapping/WeightedSubstitutionCount.h text/x-c root:root 0o644 3.6 KB
/usr/include/Bpp/Phyl/Model/ root:root 0o755
/usr/include/Bpp/Phyl/Model/AbstractBiblioMixedSubstitutionModel.h text/x-c++ root:root 0o644 4.6 KB
/usr/include/Bpp/Phyl/Model/AbstractBiblioSubstitutionModel.h text/x-c++ root:root 0o644 6.8 KB
/usr/include/Bpp/Phyl/Model/AbstractMixedSubstitutionModel.h text/x-c++ root:root 0o644 6.1 KB
/usr/include/Bpp/Phyl/Model/AbstractSubstitutionModel.h text/x-c++ root:root 0o644 13.8 KB
/usr/include/Bpp/Phyl/Model/AbstractWordSubstitutionModel.h text/x-c++ root:root 0o644 5.9 KB
/usr/include/Bpp/Phyl/Model/BinarySubstitutionModel.h text/x-c++ root:root 0o644 4.9 KB
/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonDistanceSubstitutionModel.h text/x-c++ root:root 0o644 4.6 KB
/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonFitnessSubstitutionModel.h text/x-c root:root 0o644 4.0 KB
/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonFrequenciesSubstitutionModel.h text/x-c++ root:root 0o644 4.0 KB
/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonPhaseFrequenciesSubstitutionModel.h text/x-c++ root:root 0o644 4.3 KB
/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonSubstitutionModel.h text/x-c++ root:root 0o644 6.0 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonDistanceFitnessPhaseFrequenciesSubstitutionModel.h text/x-c root:root 0o644 5.9 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonDistanceFrequenciesSubstitutionModel.h text/x-c++ root:root 0o644 6.0 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonDistancePhaseFrequenciesSubstitutionModel.h text/x-c++ root:root 0o644 5.5 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonDistanceSubstitutionModel.h text/x-c root:root 0o644 4.7 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonRateFrequenciesSubstitutionModel.h text/x-c++ root:root 0o644 4.5 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonRateSubstitutionModel.h text/x-c++ root:root 0o644 3.8 KB
/usr/include/Bpp/Phyl/Model/Codon/CodonSubstitutionModel.h text/x-c root:root 0o644 2.7 KB
/usr/include/Bpp/Phyl/Model/Codon/GY94.h text/x-c++ root:root 0o644 3.8 KB
/usr/include/Bpp/Phyl/Model/Codon/MG94.h text/x-c++ root:root 0o644 3.6 KB
/usr/include/Bpp/Phyl/Model/Codon/TripletSubstitutionModel.h text/x-c++ root:root 0o644 3.7 KB
/usr/include/Bpp/Phyl/Model/Codon/YN98.h text/x-c++ root:root 0o644 4.3 KB
/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M1.h text/x-c++ root:root 0o644 4.1 KB
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/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M7.h text/x-c++ root:root 0o644 3.7 KB
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