/usr/include/mash/sketchParameterSetup.h is in libmash-dev 1.1.1-2.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | // Copyright © 2015, Battelle National Biodefense Institute (BNBI);
// all rights reserved. Authored by: Brian Ondov, Todd Treangen,
// Sergey Koren, and Adam Phillippy
//
// See the LICENSE.txt file included with this software for license information.
#ifndef sketchParameterSetup_h
#define sketchParameterSetup_h
#include "Command.h"
#include "Sketch.h"
int sketchParameterSetup(Sketch::Parameters & parameters, const Command & command);
void warnKmerSize(const Sketch::Parameters & parameters, const Command & command, uint64_t lengthMax, const std::string & lengthMaxName, double randomChance, int kMin, int warningCount);
#endif
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