/usr/include/mmdb/mmdb_xml.h is in libmmdb-dev 1.25.5-2+b2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 | // $Id: mmdb_xml.h,v 1.20 2012/01/26 17:52:21 ekr Exp $
// =================================================================
//
// CCP4 Coordinate Library: support of coordinate-related
// functionality in protein crystallography applications.
//
// Copyright (C) Eugene Krissinel 2000-2008.
//
// This library is free software: you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3, modified in accordance with the provisions
// of the license to address the requirements of UK law.
//
// You should have received a copy of the modified GNU Lesser
// General Public License along with this library. If not, copies
// may be downloaded from http://www.ccp4.ac.uk/ccp4license.php
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU Lesser General Public License for more details.
//
// =================================================================
//
// 08.07.08 <-- Date of Last Modification.
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// -----------------------------------------------------------------
//
// **** Module : MMDB_XML <interface>
// ~~~~~~~~~
// **** Project : MacroMolecular Data Base (MMDB)
// ~~~~~~~~~
// **** Classes : CXMLObject
// ~~~~~~~~~
//
// (C) E. Krissinel 2000-2008
//
// =================================================================
//
#ifndef __MMDB_XML__
#define __MMDB_XML__
#ifndef __MMDB_MMCIF__
#include "mmdb_mmcif.h"
#endif
// ====================== CXMLObject ==========================
#define XMLR_Ok 0
#define XMLR_NoFile 1
#define XMLR_NoTag 2
#define XMLR_BrokenTag 3
#define XMLR_UnclosedTag 4
DefineClass(CXMLObject);
DefineStreamFunctions(CXMLObject);
class CXMLObject : public CStream {
public :
CXMLObject ();
CXMLObject ( cpstr Tag );
CXMLObject ( cpstr Tag, cpstr Data );
CXMLObject ( cpstr Tag, realtype V, int length=11 );
CXMLObject ( cpstr Tag, int iV, int length=0 );
CXMLObject ( cpstr Tag, Boolean bV );
CXMLObject ( cpstr Tag, PCXMLObject XMLObject );
CXMLObject ( RPCStream Object );
~CXMLObject();
void SetTag ( cpstr Tag );
void AddAttribute ( cpstr name, cpstr value );
void AddAttribute ( cpstr name, const int iV );
void AddAttribute ( cpstr name, const Boolean bV );
void SetData ( cpstr Data );
void AddData ( cpstr Data );
void SetData ( const realtype V, const int length=11 );
void SetData ( const int iV, const int length=0 );
void SetData ( const Boolean bV );
int AddMMCIFCategory ( PCMMCIFCategory mmCIFCat );
int AddMMCIFStruct ( PCMMCIFStruct mmCIFStruct );
int AddMMCIFLoop ( PCMMCIFLoop mmCIFLoop );
int AddMMCIFData ( PCMMCIFData mmCIFData );
pstr GetTag () { return objTag; }
// Here and below the functions allow for "tag1>tag2>tag3>..."
// as a composite multi-level tag, e.g. the above may stand for
// <tag1><tag2><tag3>data</tag3></tag2></tag1>. NULL tag
// corresponds to "this" object.
// objNo counts same-tag objects of the *highest* level used
// (e.g. level tag3 for composite tag tag1>tag2>tag3 ).
// GetData ( pstr& ... ) only copies a pointer to data.
pstr GetData ( cpstr Tag=NULL, int objNo=1 );
int GetData ( pstr & Data, cpstr Tag=NULL, int objNo=1 );
int GetData ( realtype & V, cpstr Tag=NULL, int objNo=1 );
int GetData ( int & iV, cpstr Tag=NULL, int objNo=1 );
int GetData ( Boolean & bV, cpstr Tag=NULL, int objNo=1 );
PCXMLObject GetObject ( cpstr Tag, int objNo=1 );
PCXMLObject GetFirstObject();
PCXMLObject GetLastObject ();
inline int GetNumberOfObjects() { return nObjects; }
PCXMLObject GetObject ( int objectNo ); // 0,1,...
inline PCXMLObject GetParent() { return parent; }
void AddObject ( PCXMLObject XMLObject , int lenInc=10 );
int WriteObject ( cpstr FName, int pos=0, int ident=2 );
void WriteObject ( RCFile f, int pos=0, int ident=2 );
int ReadObject ( cpstr FName );
int ReadObject ( RCFile f, pstr S, int & pos, int slen );
virtual void Copy ( PCXMLObject XMLObject );
void write ( RCFile f );
void read ( RCFile f );
protected:
PCXMLObject parent;
pstr objTag;
pstr objData;
int nObjects,nAlloc;
PPCXMLObject object;
int nAttributes,nAttrAlloc;
psvector attr_name,attr_value;
void InitXMLObject();
virtual void FreeMemory ();
inline void SetParent ( PCXMLObject p ) { parent = p; }
};
extern PCXMLObject mmCIF2XML ( PCMMCIFData mmCIFData, int * rc=NULL );
extern PCXMLObject mmCIF2XML ( cpstr XMLName, PCMMCIFFile mmCIFFile,
int * rc=NULL );
#endif
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