/usr/include/ngs/adapter/ReadGroupItf.hpp is in libngs-sdk-dev 1.3.0-2.
This file is owned by root:root, with mode 0o644.
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*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information
*
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* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
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#ifndef _hpp_ngs_adapt_read_groupitf_
#define _hpp_ngs_adapt_read_groupitf_
#ifndef _hpp_ngs_adapt_refcount_
#include <ngs/adapter/Refcount.hpp>
#endif
#ifndef _h_ngs_itf_read_groupitf_
#include <ngs/itf/ReadGroupItf.h>
#endif
namespace ngs_adapt
{
/*----------------------------------------------------------------------
* forwards
*/
class StringItf;
class StatisticsItf;
/*----------------------------------------------------------------------
* ReadGroupItf
*/
class ReadGroupItf : public Refcount < ReadGroupItf, NGS_ReadGroup_v1 >
{
public:
virtual StringItf * getName () const = 0;
virtual StatisticsItf * getStatistics () const = 0;
virtual bool nextReadGroup () = 0;
protected:
ReadGroupItf ();
static NGS_ReadGroup_v1_vt ivt;
private:
static NGS_String_v1 * CC get_name ( const NGS_ReadGroup_v1 * self, NGS_ErrBlock_v1 * err );
static NGS_Statistics_v1 * CC get_stats ( const NGS_ReadGroup_v1 * self, NGS_ErrBlock_v1 * err );
static bool CC next ( NGS_ReadGroup_v1 * self, NGS_ErrBlock_v1 * err );
};
} // namespace ngs_adapt
#endif // _hpp_ngs_adapt_read_groupitf_
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