/usr/include/pbbam/virtual/VirtualPolymeraseReader.h is in libpbbam-dev 0.7.4+ds-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 | // Copyright (c) 2015, Pacific Biosciences of California, Inc.
//
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted (subject to the limitations in the
// disclaimer below) provided that the following conditions are met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// * Redistributions in binary form must reproduce the above
// copyright notice, this list of conditions and the following
// disclaimer in the documentation and/or other materials provided
// with the distribution.
//
// * Neither the name of Pacific Biosciences nor the names of its
// contributors may be used to endorse or promote products derived
// from this software without specific prior written permission.
//
// NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE
// GRANTED BY THIS LICENSE. THIS SOFTWARE IS PROVIDED BY PACIFIC
// BIOSCIENCES AND ITS CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED
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// DISCLAIMED. IN NO EVENT SHALL PACIFIC BIOSCIENCES OR ITS
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// LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF
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//
// File Description
/// \file VirtualPolymeraseReader.h
/// \brief Defines the VirtualPolymeraseReader class.
//
// Author: Armin Töpfer
#ifndef VIRTUALPOLYMERASEREADER_H
#define VIRTUALPOLYMERASEREADER_H
#include "pbbam/virtual/VirtualPolymeraseBamRecord.h"
#include "pbbam/virtual/ZmwReadStitcher.h"
namespace PacBio {
namespace BAM {
/// \deprecated Use ZmwReadStitcher instead.
typedef ZmwReadStitcher VirtualPolymeraseReader;
} // namespace BAM
} // namespace PacBio
#endif // VIRTUALPOLYMERASEREADER_H
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