/usr/include/sbml/packages/fbc/validator/FbcSBMLError.h is in libsbml5-dev 5.13.0+dfsg-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 | /**
* @file FbcSBMLError.h
* @brief Represents SBML errors and other diagnostics
* @author Michael Hucka
* @author Sarah Keating
*
* <!--------------------------------------------------------------------------
* This file is part of libSBML. Please visit http://sbml.org for more
* information about SBML, and the latest version of libSBML.
*
* Copyright (C) 2013-2016 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
* 3. University of Heidelberg, Heidelberg, Germany
*
* Copyright (C) 2009-2013 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
*
* This library is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation. A copy of the license agreement is provided
* in the file named "LICENSE.txt" included with this software distribution
* and also available online as http://sbml.org/software/libsbml/license.html
* ------------------------------------------------------------------------ -->
*/
#ifndef FbcSBMLError_h
#define FbcSBMLError_h
#include <sbml/common/extern.h>
#include <sbml/SBMLError.h>
#include <sbml/SBMLNamespaces.h>
LIBSBML_CPP_NAMESPACE_BEGIN
BEGIN_C_DECLS
/**
* @enum FbcSBMLErrorCode_t
* Codes for all SBML-level errors and warnings from the 'fbc' package.
*
* These are distinguished from other SBML error codes
* by having a number between 2000000 and 2099999.
*
* @copydetails doc_sbml_error_code_ranges
*/
typedef enum
{
FbcUnknown = 2010100 /*!< Unknown error from fbc */
, FbcNSUndeclared = 2010101 /*!< The fbc ns is not correctly declared */
, FbcElementNotInNs = 2010102 /*!< Element not in fbc namespace */
, FbcDuplicateComponentId = 2010301 /*!< Duplicate 'id' attribute value */
, FbcSBMLSIdSyntax = 2010302 /*!< Invalid 'id' attribute */
, FbcAttributeRequiredMissing = 2020101 /*!< Required fbc:required attribute on <code><sbml></code> */
, FbcAttributeRequiredMustBeBoolean = 2020102 /*!< The fbc:required attribute must be Boolean */
, FbcRequiredFalse = 2020103 /*!< The fbc:required attribute must be 'false' */
, FbcOnlyOneEachListOf = 2020201 /*!< One of each list of allowed */
, FbcNoEmptyListOfs = 2020202 /*!< ListOf elements cannot be empty */
, FbcLOFluxBoundsAllowedElements = 2020203 /*!< Allowed elements on ListOfFluxBounds */
, FbcLOObjectivesAllowedElements = 2020204 /*!< Allowed elements on ListOfObjectives */
, FbcLOFluxBoundsAllowedAttributes = 2020205 /*!< Allowed attributes on ListOfFluxBounds */
, FbcLOObjectivesAllowedAttributes = 2020206 /*!< Allowed attributes on ListOfObjectives */
, FbcActiveObjectiveSyntax = 2020207 /*!< Type of activeObjective attribute */
, FbcActiveObjectiveRefersObjective = 2020208 /*!< ActiveObjective must reference Objective */
, FbcModelMustHaveStrict = 2020209 /*!< 'Strict' attribute required on <code><model></code> */
, FbcModelStrictMustBeBoolean = 2020210 /*!< 'Strict' attribute must be boolean */
, FbcLOGeneProductsAllowedElements = 2020211 /*!< Allowed elements on ListOfGeneProducts */
, FbcLOGeneProductsAllowedAttributes = 2020212 /*!< Allowed attributes on ListOfGeneProducts */
, FbcSpeciesAllowedL3Attributes = 2020301 /*!< Species allowed attributes */
, FbcSpeciesChargeMustBeInteger = 2020302 /*!< Charge must be integer */
, FbcSpeciesFormulaMustBeString = 2020303 /*!< Chemical formula must be string */
, FbcFluxBoundAllowedL3Attributes = 2020401 /*!< <code><fluxBound></code> may only have 'metaId' and 'sboTerm' from L3 namespace */
, FbcFluxBoundAllowedElements = 2020402 /*!< <code><fluxBound></code> may only have <code><notes></code> and <code><annotations></code> from L3 Core */
, FbcFluxBoundRequiredAttributes = 2020403 /*!< Invalid attribute found on <code><fluxBound></code> object */
, FbcFluxBoundRectionMustBeSIdRef = 2020404 /*!< Datatype for 'fbc:reaction' must be SIdRef */
, FbcFluxBoundNameMustBeString = 2020405 /*!< The attribute 'fbc:name' must be of the data type string */
, FbcFluxBoundOperationMustBeEnum = 2020406 /*!< The attribute 'fbc:operation' must be of data type FbcOperation */
, FbcFluxBoundValueMustBeDouble = 2020407 /*!< The attribute 'fbc:value' must be of the data type double */
, FbcFluxBoundReactionMustExist = 2020408 /*!< 'fbc:reaction' must refer to valid reaction */
, FbcFluxBoundsForReactionConflict = 2020409 /*!< Conflicting set of FluxBounds for a reaction */
, FbcObjectiveAllowedL3Attributes = 2020501 /*!< <code><objective></code> may only have 'metaId' and 'sboTerm' from L3 namespace */
, FbcObjectiveAllowedElements = 2020502 /*!< <code><objective></code> may only have <code><notes></code> and <code><annotations></code> from L3 Core */
, FbcObjectiveRequiredAttributes = 2020503 /*!< Invalid attribute found on <code><objective></code> object */
, FbcObjectiveNameMustBeString = 2020504 /*!< The attribute 'fbc:name' must be of the data type string */
, FbcObjectiveTypeMustBeEnum = 2020505 /*!< The attribute 'fbc:type' must be of data type FbcType. */
, FbcObjectiveOneListOfObjectives = 2020506 /*!< An <code><objective></code> must have one <code><listOfFluxObjectives></code>. */
, FbcObjectiveLOFluxObjMustNotBeEmpty = 2020507 /*!< <code><listOfFluxObjectives></code> subobject must not be empty */
, FbcObjectiveLOFluxObjOnlyFluxObj = 2020508 /*!< Invalid element found in <code><listOfFluxObjectives></code> */
, FbcObjectiveLOFluxObjAllowedAttribs = 2020509 /*!< <code><listOfFluxObjectives></code> may only have 'metaId' and 'sboTerm' from L3 core */
, FbcFluxObjectAllowedL3Attributes = 2020601 /*!< <code><fluxObjective></code> may only have 'metaId' and 'sboTerm' from L3 namespace */
, FbcFluxObjectAllowedElements = 2020602 /*!< <code><fluxObjective></code> may only have <code><notes></code> and <code><annotations></code> from L3 Core */
, FbcFluxObjectRequiredAttributes = 2020603 /*!< Invalid attribute found on <code><fluxObjective></code> object */
, FbcFluxObjectNameMustBeString = 2020604 /*!< The attribute 'fbc:name' must be of the data type string */
, FbcFluxObjectReactionMustBeSIdRef = 2020605 /*!< Datatype for 'fbc:reaction' must be SIdRef */
, FbcFluxObjectReactionMustExist = 2020606 /*!< 'fbc:reaction' must refer to valid reaction */
, FbcFluxObjectCoefficientMustBeDouble = 2020607 /*!< The attribute 'fbc:coefficient' must be of the data type double */
, FbcFluxObjectCoefficientWhenStrict = 2020608 /*!< The 'fbc:coefficient' must be declared when strict */
, FbcReactionOnlyOneGeneProdAss = 2020701 /*!< One GeneProductAssociation in a Reaction */
, FbcReactionAllowedAttributes = 2020702 /*!< Fbc attributes on a Reaction */
, FbcReactionLwrBoundSIdRef = 2020703 /*!< LowerBound must be SIdRef */
, FbcReactionUpBoundSIdRef = 2020704 /*!< UpperBound must be SIdRef */
, FbcReactionLwrBoundRefExists = 2020705 /*!< LowerBound must point to Parameter */
, FbcReactionUpBoundRefExists = 2020706 /*!< UpperBound must point to Parameter */
, FbcReactionMustHaveBoundsStrict = 2020707 /*!< Reaction must have bounds when strict */
, FbcReactionConstantBoundsStrict = 2020708 /*!< Reaction bounds constant when strict */
, FbcReactionBoundsMustHaveValuesStrict = 2020709 /*!< Reaction bounds must have values when strict */
, FbcReactionBoundsNotAssignedStrict = 2020710 /*!< Reaction bounds not assigned when strict */
, FbcReactionLwrBoundNotInfStrict = 2020711 /*!< LowerBound cannot be INF when strict */
, FbcReactionUpBoundNotNegInfStrict = 2020712 /*!< UpperBound cannot be -INF when strict */
, FbcReactionLwrLessThanUpStrict = 2020713 /*!< LowerBound less than upperBound when strict */
, FbcSpeciesReferenceConstantStrict = 2020714 /*!< SpeciesReferences must be constant when strict */
, FbcSpeciesRefsStoichMustBeRealStrict = 2020715 /*!< Stoichiometry of SpeciesReferences must be real valued when strict */
, FbcSpeciesRefNotAssignedStrict = 2020716 /*!< SpeciesReference not target of InitialAssignment when strict" */
, FbcGeneProdAssocAllowedCoreAttribs = 2020801 /*!< Allowed core attributes on <code><GeneProductAssociation></code> */
, FbcGeneProdAssocAllowedCoreElements = 2020802 /*!< Allowed core elements on <code><GeneProductAssociation></code> */
, FbcGeneProdAssocAllowedAttribs = 2020803 /*!< Allowed fbc attributes on <code><GeneProductAssociation></code> */
, FbcGeneProdAssocIdSyntax = 2020804 /*!< 'fbc:id' must have SId syntax */
, FbcGeneProdAssocContainsOneElement = 2020805 /*!< <code><GeneProductAssociation></code> must contain one concrete object */
, FbcGeneProdAssocNameMustBeString = 2020806 /*!< 'fbc:name' must be string */
, FbcGeneProdRefAllowedCoreAttribs = 2020901 /*!< Allowed core attributes on <code><GeneProductRef></code> */
, FbcGeneProdRefAllowedCoreElements = 2020902 /*!< Allowed core elements on <code><GeneProductRef></code> */
, FbcGeneProdRefAllowedAttribs = 2020903 /*!< Allowed fbc attributes on <code><GeneProductRef></code> */
, FbcGeneProdRefGeneProductSIdRef = 2020904 /*!< 'fbc:geneProduct' must be SIdRef */
, FbcGeneProdRefGeneProductExists = 2020908 /*!< 'fbc:geneProduct' must point to existing <code><GeneProduct></code> */
, FbcAndAllowedCoreAttributes = 2021001 /*!< Allowed core attributes on <code><And></code> */
, FbcAndAllowedCoreElements = 2021002 /*!< Allowed core elements on <code><And></code> */
, FbcAndTwoChildren = 2021003 /*!< <code><And></code> must have at least two child elements */
, FbcOrAllowedCoreAttributes = 2021101 /*!< Allowed core attributes on <code><Or></code> */
, FbcOrAllowedCoreElements = 2021102 /*!< Allowed core elements on <code><Or></code> */
, FbcOrTwoChildren = 2021103 /*!< <code><Or></code> must have at least two child elements */
, FbcGeneProductAllowedCoreAttributes = 2021201 /*!< Allowed core attributes on <code><GeneProduct></code> */
, FbcGeneProductAllowedCoreElements = 2021202 /*!< Allowed core elements on <code><GeneProduct></code> */
, FbcGeneProductAllowedAttributes = 2021203 /*!< Allowed fbc attributes on <code><GeneProduct></code> */
, FbcGeneProductLabelMustBeString = 2021204 /*!< 'fbc:label' must be string */
, FbcGeneProductLabelMustBeUnique = 2021205 /*!< 'fbc:label' must be unique */
, FbcGeneProductNameMustBeString = 2021206 /*!< 'fbc:name' must be string */
, FbcGeneProductAssocSpeciesMustExist = 2021207 /*!< 'fbc:associatedSpecies' must point to existing <code><species></code> */
} FbcSBMLErrorCode_t;
END_C_DECLS
LIBSBML_CPP_NAMESPACE_END
#endif /* SBMLError_h */
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