This file is indexed.

/usr/include/sbml/packages/render/extension/RenderGraphicalObjectPlugin.h is in libsbml5-dev 5.13.0+dfsg-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
/**
 * @file    RenderGraphicalObjectPlugin.h
 * @brief   Definition of RenderGraphicalObjectPlugin, the plugin class of
 *          the render package for the GraphicalObject element.
 * @author  Frank T. Bergmann
 *
 *<!---------------------------------------------------------------------------
 * This file is part of libSBML.  Please visit http://sbml.org for more
 * information about SBML, and the latest version of libSBML.
 *
 * Copyright (C) 2013-2016 jointly by the following organizations:
 *     1. California Institute of Technology, Pasadena, CA, USA
 *     2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
 *     3. University of Heidelberg, Heidelberg, Germany
 *
 * Copyright (C) 2009-2013 jointly by the following organizations: 
 *     1. California Institute of Technology, Pasadena, CA, USA
 *     2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
 *  
 * This library is free software; you can redistribute it and/or modify it
 * under the terms of the GNU Lesser General Public License as published by
 * the Free Software Foundation.  A copy of the license agreement is provided
 * in the file named "LICENSE.txt" included with this software distribution
 * and also available online as http://sbml.org/software/libsbml/license.html
 *------------------------------------------------------------------------- -->
 */

#ifndef RenderGraphicalObjectPlugin_h
#define RenderGraphicalObjectPlugin_h


#include <sbml/common/extern.h>
#include <sbml/common/sbmlfwd.h>
#include <sbml/packages/render/extension/RenderExtension.h>

#ifdef __cplusplus

#include <sbml/SBMLErrorLog.h>
#include <sbml/Model.h>
#include <sbml/xml/XMLInputStream.h>
#include <sbml/xml/XMLOutputStream.h>
#include <sbml/extension/SBasePlugin.h>


LIBSBML_CPP_NAMESPACE_BEGIN

class LIBSBML_EXTERN RenderGraphicalObjectPlugin : public SBasePlugin
{
public:

  /**
   * Constructor
   */
  RenderGraphicalObjectPlugin  (const std::string &uri, const std::string &prefix,
                    RenderPkgNamespaces *groupsns);


  /**
   * Copy constructor. Creates a copy of this SBase object.
   */
  RenderGraphicalObjectPlugin (const RenderGraphicalObjectPlugin & orig);


  /**
   * Destroy this object.
   */
  virtual ~RenderGraphicalObjectPlugin  ();


  /**
   * Assignment operator for RenderGraphicalObjectPlugin .
   */
  RenderGraphicalObjectPlugin & operator=(const RenderGraphicalObjectPlugin & orig);


  /**
   * Creates and returns a deep copy of this RenderGraphicalObjectPlugin  object.
   * 
   * @return a (deep) copy of this RenderGraphicalObjectPlugin object
   */
  virtual RenderGraphicalObjectPlugin * clone () const;


  // --------------------------------------------------------
  //
  // overridden virtual functions for reading/writing/checking 
  // elements
  //
  // --------------------------------------------------------

  /** @cond doxygenLibsbmlInternal */
  /**
   * Subclasses should override this method to get the list of
   * expected attributes.
   * This function is invoked from corresponding readAttributes()
   * function.
   */
  virtual void addExpectedAttributes(ExpectedAttributes& attributes);
  /** @endcond */


  /** @cond doxygenLibsbmlInternal */
  /**
   * Reads the attributes of corresponding package in SBMLDocument element.
   */
  virtual void readAttributes (const XMLAttributes& attributes,
                               const ExpectedAttributes& expectedAttributes);
  /** @endcond */


  /** @cond doxygenLibsbmlInternal */
  /**
   * Writes the attributes of corresponding package in SBMLDocument element.
   */
  virtual void writeAttributes (XMLOutputStream& stream) const;
  /** @endcond */

  /** ------------------------------------------------------------------
   *
   *  Additional public functions
   *
   * ------------------------------------------------------------------
   */
  
    /**
     * Returns the object role string for the object.
     */
    const std::string& getObjectRole() const;

    /**
     * Sets the object role string for the object.
     */
    void setObjectRole(const std::string& role);

    /**
     * Returns whether the object role has been set or not.
     */
    bool isSetObjectRole() const;

  // ---------------------------------------------------------
  //
  // virtual functions (internal implementation) which should
  // be overridden by subclasses.
  //
  // ---------------------------------------------------------

  /** @cond doxygenLibsbmlInternal */

  /**
   * Accepts the given SBMLVisitor.
   *
   * @return the result of calling <code>v.visit()</code>, which indicates
   * whether or not the Visitor would like to visit the SBML object's next
   * sibling object (if available).
   */
  virtual bool accept (SBMLVisitor& v) const;

  /** @endcond */
 

protected:
  /** @cond doxygenLibsbmlInternal */

  /*-- data members --*/
  std::string mObjectRole;   
  /** @endcond */
};

LIBSBML_CPP_NAMESPACE_END

#endif  /* __cplusplus */
#ifndef SWIG

LIBSBML_CPP_NAMESPACE_BEGIN
BEGIN_C_DECLS


END_C_DECLS
LIBSBML_CPP_NAMESPACE_END

#endif  /* !SWIG */
#endif  /* RenderGraphicalObjectPlugin_h */