/usr/include/TiledArray/val

/*
 *  This file is a part of TiledArray.
 *  Copyright (C) 2014  Virginia Tech
 *
 *  This program is free software: you can redistribute it and/or modify
 *  it under the terms of the GNU General Public License as published by
 *  the Free Software Foundation, either version 3 of the License, or
 *  (at your option) any later version.
 *
 *  This program is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *  GNU General Public License for more details.
 *
 *  You should have received a copy of the GNU General Public License
 *  along with this program.  If not, see <http://www.gnu.org/licenses/>.
 *
 *  Justus Calvin
 *  Department of Chemistry, Virginia Tech
 *
 *  val_array.h
 *  Feb 17, 2014
 *
 */

#ifndef TILEDARRAY_SHARED_BUFFER_H__INCLUDED
#define TILEDARRAY_SHARED_BUFFER_H__INCLUDED

#include <TiledArray/size_array.h>

#ifndef TILEDARRAY_DEFAULT_ALIGNMENT
#define TILEDARRAY_DEFAULT_ALIGNMENT 16
#endif // TILEDARRAY_ALIGNMENT

namespace TiledArray {
  namespace detail {

    /// Value array

    /// This is minimal wrapper around a dynamically allocated array. The array
    /// may be shared and includes a reference counter.
    /// \tparam T The element type of the array
    template <typename T>
    class ValArray : private SizeArray<T> {
    public:

      typedef ValArray<T> ValArray_; ///< This object type
      typedef typename SizeArray<T>::size_type size_type; ///< size type
      typedef typename SizeArray<T>::value_type value_type; ///< Element type
      typedef typename SizeArray<T>::reference reference; ///< Reference type
      typedef typename SizeArray<T>::const_reference const_reference; ///< Const reference type
      typedef typename SizeArray<T>::pointer pointer; ///< Data pointer type
      typedef typename SizeArray<T>::const_pointer const_pointer; ///< Const data pointer type
      typedef typename SizeArray<T>::difference_type difference_type; ///< Difference type
      typedef typename SizeArray<T>::iterator iterator; ///< Iterator type
      typedef typename SizeArray<T>::const_iterator const_iterator; ///< Const iterator type

      static const std::size_t alignment = TILEDARRAY_DEFAULT_ALIGNMENT;

    private:

      mutable madness::AtomicInt* counter_; ///< The pointer to reference counter

      template <typename U>
      typename std::enable_if<std::is_scalar<U>::value>::type
      default_construct(const size_type, U* restrict) { }

      template <typename U>
      typename std::enable_if<! std::is_scalar<U>::value>::type
      default_construct(const size_type n, U* restrict u) {
        size_type i = 0ul;
        try {
          for(; i < n; ++i)
            new(u + i) U();
        } catch(...) {
          math::destroy_vector(i, u);
          throw;
        }
      }

      void deallocate() {
        if(counter_) {
          const int count = (*counter_)--;
          if(count == 1) {
            math::destroy_vector(SizeArray<T>::size(), SizeArray<T>::begin());
            free(counter_);
          }
        }
      }

      void init(const size_type n) {
        typedef std::integral_constant<size_type,
            sizeof(madness::AtomicInt) + ((alignment - (sizeof(madness::AtomicInt) & (alignment - 1ul))) & ~alignment)
            > sizeof_aligned_atomic_int;

        // Allocate buffer
        void* buffer = NULL;
        if(posix_memalign(& buffer, alignment, (n * sizeof(value_type)) + sizeof_aligned_atomic_int::value) != 0)
          throw std::bad_alloc();

        // Initialize counter
        counter_ = reinterpret_cast<madness::AtomicInt*>(buffer);
        new(counter_) madness::AtomicInt;
        *counter_ = 1;

        // Initialize the array
        pointer const array = reinterpret_cast<pointer>(reinterpret_cast<char*>(buffer) + sizeof_aligned_atomic_int::value);
        SizeArray<T>::set(array, n);
      }

    public:

      ValArray() : SizeArray<T>(), counter_(NULL) { }

      explicit ValArray(const size_type n) :
        SizeArray<T>(), counter_(NULL)
      {
        init(n);
        default_construct(n, SizeArray<T>::data());
      }

      template <typename Value,
          typename std::enable_if<
              std::is_convertible<value_type, Value>::value
          >::type* = nullptr>
      ValArray(const size_type n, const Value& value) :
        SizeArray<T>(), counter_(NULL)
      {
        init(n);
        math::uninitialized_fill_vector(n, value, SizeArray<T>::data());
      }

      template <typename Arg>
      ValArray(const size_type n, const Arg* const arg) :
        SizeArray<T>(), counter_(NULL)
      {
        init(n);
        math::uninitialized_copy_vector(n, arg, SizeArray<T>::data());
      }

      template <typename Arg, typename Op>
      ValArray(const size_type n, const Arg* restrict const arg, const Op& op) :
        SizeArray<T>(), counter_(NULL)
      {
        init(n);
        math::uninitialized_unary_vector_op(n, arg, SizeArray<T>::data(), op);
      }

      template <typename U, typename Op>
      ValArray(const ValArray<U>& arg, const Op& op) :
        SizeArray<T>(), counter_(NULL)
      {
        init(arg.size());
        math::uninitialized_unary_vector_op(arg.size(), arg.data(), SizeArray<T>::data(), op);
      }

      template <typename Left, typename Right, typename Op>
      ValArray(const size_type n, const Left* restrict const left,
          const Right* restrict const right, const Op& op) :
        SizeArray<T>(), counter_(NULL)
      {
        init(n);
        math::uninitialized_binary_vector_op(n, left, right, SizeArray<T>::data(), op);
      }

      template <typename U, typename V, typename Op>
      ValArray(const ValArray<U>& left, const ValArray<V>& right, const Op& op) :
        SizeArray<T>(), counter_(NULL)
      {
        TA_ASSERT(left.size() == right.size());
        init(left.size());
        math::uninitialized_binary_vector_op(left.size(), left.data(),
            right.data(), SizeArray<T>::data(), op);
      }

      ValArray(const ValArray_& other) :
        SizeArray<T>(const_cast<pointer>(other.begin()), const_cast<pointer>(other.end())),
        counter_(other.counter_)
      {
        if(counter_)
          (*counter_)++;
      }

      ValArray_& operator=(const ValArray_& other) {
        if(counter_ != other.counter_) {
          // Cache pointers from other
          madness::AtomicInt* const counter = other.counter_;
          pointer const first = const_cast<pointer>(other.begin());
          pointer const last = const_cast<pointer>(other.end());

          // Increment the reference counter for other
          if(counter)
            (*counter)++;

          // Destroy this object
          deallocate();

          // Set the data
          counter_ = counter;
          SizeArray<T>::set(first, last);
        }

        return *this;
      }

      ~ValArray() { deallocate(); }

      // Import SizeArray interface

      using SizeArray<T>::begin;
      using SizeArray<T>::end;
      using SizeArray<T>::rbegin;
      using SizeArray<T>::rend;
      using SizeArray<T>::operator[];
      using SizeArray<T>::at;
      using SizeArray<T>::front;
      using SizeArray<T>::back;
      using SizeArray<T>::size;
      using SizeArray<T>::empty;
      using SizeArray<T>::max_size;
      using SizeArray<T>::data;
      using SizeArray<T>::assign;
      using SizeArray<T>::binary;
      using SizeArray<T>::unary;
      using SizeArray<T>::reduce;
      using SizeArray<T>::row_reduce;
      using SizeArray<T>::col_reduce;
      using SizeArray<T>::outer;
      using SizeArray<T>::outer_fill;


      // ValArray wrappers for vector operations

      /// Binary vector operation

      /// Perform a binary vector operation where this array is the left-hand
      /// argument and arg is the right-hand argument. The data elements are
      /// modified by: <tt>op(*this[i], arg[i])</tt>.
      /// \tparam U The element type of \c arg
      /// \tparam Op The binary operation
      /// \param arg The right-hand argument
      /// \param op The binary operation
      /// \throw TiledArray::Exception When the size of \c arg is not equal to
      /// the size of this array.
      template <typename U, typename Op>
      void binary(const ValArray<U>& arg, const Op& op) {
        TA_ASSERT(arg.size() == SizeArray<T>::size());
        SizeArray<T>::binary(arg.data(), op);
      }

      /// Binary vector operation

      /// Perform a binary vector operation with \c left and \c right, and store
      /// the result in this array. The data elements are given by:
      /// <tt>*this[i] = op(left[i], right[i])</tt>.
      /// \tparam U The element type of \c arg
      /// \tparam Op The binary operation
      /// \param left The left-hand argument
      /// \param right The right-hand argument
      /// \param op The binary operation
      /// \throw TiledArray::Exception When the sizes of left and right are not
      /// equal to the size of this array.
      template <typename U, typename V, typename Op>
      void binary(const ValArray<U>& left, const ValArray<V>& right, const Op& op) {
        TA_ASSERT(left.size() == SizeArray<T>::size());
        TA_ASSERT(right.size() == SizeArray<T>::size());
        SizeArray<T>::binary(left.data(), right.data(), op);
      }

      /// Unary vector operation

      /// Perform a unary vector operation, and store the result in this array.
      /// The data elements are given by: <tt>*this[i] = op(arg[i])</tt>.
      /// \tparam U The element type of \c arg
      /// \tparam Op The binary operation
      /// \param arg The right-hand argument
      /// \param op The binary operation
      /// \throw TiledArray::Exception When the size of \c arg is not equal to
      /// the size of this array.
      template <typename U, typename Op>
      void unary(const ValArray<U>& arg, const Op& op) {
        TA_ASSERT(arg.size() == SizeArray<T>::size());
        SizeArray<T>::unary(arg.data(), op);
      }

      /// Binary reduce operation

      /// Binary reduction operation where this object is the left-hand
      /// argument type. The reduced result is computed by
      /// <tt>op(result, *this[i], arg[i])</tt>.
      /// \tparam U The element type of \c arg
      /// \tparam Result The result type of the reduction
      /// \tparam Op The reduction operation.
      /// \param arg The right-hand array argument
      /// \param result The initial value of the reduction
      /// \param op The binary reduction operation
      /// \return The reduced value
      /// \throw TiledArray::Exception When <tt>arg.size() != size()</tt>.
      template <typename U, typename Result, typename Op>
      Result reduce(const ValArray<U>& arg, Result& result, const Op& op) {
        TA_ASSERT(arg.size() == SizeArray<T>::size());
        return SizeArray<T>::reduce(arg.data(), result, op);
      }

      /// Reduce row operation

      /// Reduce rows of \c left to this array, where the size of rows is equal
      /// to \c right.size(). The reduced result is computed by
      /// <tt>op(*this[i], left[i][j], right[j])</tt>.
      /// \tparam U The element type of \c left
      /// \tparam V The element type of \c right
      /// \tparam Op The reduction operation
      /// \param left The array to be reduced of size \c size()*right.size()
      /// \param right The right-hand array
      /// \param op The reduction operation
      /// \throw TiledArray::Exception When <tt>left.size() != (size() * right.size())</tt>.
      template <typename U, typename V, typename Op>
      void row_reduce(const ValArray<U>& left, const ValArray<V>& right, const Op& op) {
        TA_ASSERT(left.size() == (SizeArray<T>::size() * right.size()));
        SizeArray<T>::row_reduce(right.size(), left.data(), right.data(), op);
      }

      /// Reduce row operation

      /// Reduce rows of \c arg to this array, where a row have
      /// \c arg.size()/size() elements. The reduced result is computed by
      /// <tt>op(*this[i], arg[i][j])</tt>.
      /// \tparam U The element type of \c arg
      /// \tparam Op The reduction operation
      /// \param arg The array to be reduced
      /// \param op The reduction operation
      /// \throw TiledArray::Exception When <tt>(arg.size() % size()) != 0</tt>.
      template <typename U, typename Op>
      void row_reduce(const ValArray<U>& arg, const Op& op) {
        TA_ASSERT((arg.size() % SizeArray<T>::size()) == 0ul);
        SizeArray<T>::row_reduce(arg.size() / SizeArray<T>::size(), arg, op);
      }

      /// Reduce column operation

      /// Reduce columns of \c left to this array, where columns have
      /// \c right.size() elements. The reduced result is computed by
      /// <tt>op(*this[j], left[i][j], right[i])</tt>.
      /// \tparam U The element type of \c left
      /// \tparam V The element type of \c right
      /// \tparam Op The reduction operation
      /// \param left The array to be reduced of size \c size()*right.size()
      /// \param right The right-hand array
      /// \param op The reduction operation
      /// \throw TiledArray::Exception When <tt>left.size() != (size() * right.size())</tt>.
      template <typename U, typename V, typename Op>
      void col_reduce(const ValArray<U>& left, const ValArray<V>& right, const Op& op) {
        TA_ASSERT(left.size() == (SizeArray<T>::size() * right.size()));
        SizeArray<T>::col_reduce(right.size(), left.data(), right.data(), op);
      }

      /// Reduce column operation

      /// Reduce columns of \c arg to this array, where a columns have
      /// \c arg.size()/size() elements. The reduced result is computed by
      /// <tt>op(*this[i], arg[i][j])</tt>.
      /// \tparam U The element type of \c arg
      /// \tparam Op The reduction operation
      /// \param arg The array to be reduced
      /// \param op The reduction operation
      /// \throw TiledArray::Exception When <tt>(arg.size() % size()) != 0</tt>.
      template <typename U, typename Op>
      void col_reduce(const ValArray<U>& arg, const Op& op) {
        TA_ASSERT((arg.size() % SizeArray<T>::size()) == 0ul);
        SizeArray<T>::col_reduce(arg.size() / SizeArray<T>::size(), arg, op);
      }

      /// Outer operation

      /// This function use two arrays, \c left and \c right,
      /// to modify this array ( which is treated as a matrix of size
      /// <tt>left.size() * right.size()</tt> ). Elements of this array are
      /// modified by <tt>op(*this[i][j], left[i], right[j])</tt>.
      /// \tparam U The left-hand argument type
      /// \tparam V The right-hand argument type
      /// \param left The left-hand array
      /// \param right The right-hand array
      /// \param op The outer operation
      /// \throw TiledArray::Exception When <tt>size() != (left.size() * right.size())</tt>.
      template <typename U, typename V, typename Op>
      void outer(const ValArray<U>& left, const ValArray<V>& right, const Op& op) {
        TA_ASSERT(SizeArray<T>::size() == (left.size() * right.size()));
        SizeArray<T>::outer(left.size(), right.size(), left.data(), right.data(), op);
      }

      /// Outer fill operation

      /// This function use two arrays, \c left and \c right,
      /// to fill this array ( which is treated as a matrix of size
      /// <tt>left.size() * right.size()</tt> ). Elements of this array are
      /// filled by <tt>op(*this[i][j], left[i], right[j])</tt>.
      /// \tparam U The left-hand argument type
      /// \tparam V The right-hand argument type
      /// \param left The left-hand array
      /// \param right The right-hand array
      /// \param op The outer operation
      /// \throw TiledArray::Exception When <tt>size() != (left.size() * right.size())</tt>.
      template <typename U, typename V, typename Op>
      void outer_fill(const ValArray<U>& left, const ValArray<V>& right, const Op& op) {
        TA_ASSERT(SizeArray<T>::size() == (left.size() * right.size()));
        SizeArray<T>::outer_fill(left.size(), right.size(), left.data(), right.data(), op);
      }

      /// Outer operation

      /// This function use two arrays, \c left and \c right,
      /// to modify this array ( which is treated as a matrix of size
      /// <tt>left.size() * right.size()</tt> ). Elements of this array are
      /// modified by <tt>op(*this[i][j], left[i], right[j])</tt>.
      /// \tparam U The left-hand argument type
      /// \tparam V The right-hand argument type
      /// \param[in] left The left-hand array
      /// \param[in] right The right-hand array
      /// \param[out] a The array that will hold the result
      /// \param[in] op The outer operation
      /// \throw TiledArray::Exception When <tt>size() != (left.size() * right.size())</tt>.
      template <typename U, typename V, typename A, typename Op>
      void outer_fill(const ValArray<U>& left,  const ValArray<V>& right,
          const ValArray<A>& a, const Op& op)
      {
        TA_ASSERT(SizeArray<T>::size() == (left.size() * right.size()));
        TA_ASSERT(a.size() == SizeArray<T>::size());
        SizeArray<T>::outer_fill(left.size(), right.size(), left.data(), right.data(), a.data(), op);
      }


      void swap(ValArray_& other) {
        std::swap(counter_, other.counter_);
        pointer const first = other.begin();
        pointer const last = other.end();
        other.set(begin(), end());
        SizeArray<T>::set(first, last);
      }


      // Comparison operators
      template <typename U>
      bool operator==(const ValArray<U>& other) const {
        return SizeArray<T>::operator==(other);
      }

      template <typename U>
      bool operator!=(const ValArray<U>& other) const {
        return SizeArray<T>::operator!=(other);
      }

    }; // class ValArray


    template <typename T>
    inline std::ostream& operator<<(std::ostream& os, const ValArray<T>& val_array) {
      print_array(os, val_array);
      return os;
    }

  } // namespace detail
} // namespace TiledArray

#endif // TILEDARRAY_SHARED_BUFFER_H__INCLUDED
libtiledarray-dev 0.6.0-5 / usr / include / TiledArray / val_array.h
