/usr/include/trilinos/amesos_cholmod_partition.h is in libtrilinos-amesos-dev 12.10.1-3.
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/* === Include/cholmod_partition.h ========================================== */
/* ========================================================================== */
/* -----------------------------------------------------------------------------
* CHOLMOD/Include/cholmod_partition.h.
* Copyright (C) 2005-2006, Univ. of Florida. Author: Timothy A. Davis
* CHOLMOD/Include/cholmod_partition.h is licensed under Version 2.1 of the GNU
* Lesser General Public License. See lesser.txt for a text of the license.
* CHOLMOD is also available under other licenses; contact authors for details.
* http://www.cise.ufl.edu/research/sparse
* -------------------------------------------------------------------------- */
/* CHOLMOD Partition module.
*
* Graph partitioning and graph-partition-based orderings. Includes an
* interface to CCOLAMD and CSYMAMD, constrained minimum degree ordering
* methods which order a matrix following constraints determined via nested
* dissection.
*
* cholmod_nested_dissection CHOLMOD nested dissection ordering
* cholmod_metis METIS nested dissection ordering (METIS_NodeND)
* cholmod_ccolamd interface to CCOLAMD ordering
* cholmod_csymamd interface to CSYMAMD ordering
* cholmod_camd interface to CAMD ordering
* cholmod_bisect graph partitioner (currently based on METIS)
* cholmod_metis_bisector direct interface to METIS_NodeComputeSeparator
*
* Requires the Core and Cholesky modules, and three packages: METIS, CAMD,
* and CCOLAMD. Optionally used by the Cholesky module.
*
* Note that METIS does not have a version that uses UF_long integers. If you
* try to use cholmod_nested_dissection, cholmod_metis, cholmod_bisect, or
* cholmod_metis_bisector on a matrix that is too large, an error code will be
* returned. METIS does have an "idxtype", which could be redefined as UF_long,
* if you wish to edit METIS or use compile-time flags to redefine idxtype.
*/
#ifndef AMESOS_CHOLMOD_PARTITION_H
#define AMESOS_CHOLMOD_PARTITION_H
#include "amesos_cholmod_core.h"
/* -------------------------------------------------------------------------- */
/* cholmod_nested_dissection */
/* -------------------------------------------------------------------------- */
/* Order A, AA', or A(:,f)*A(:,f)' using CHOLMOD's nested dissection method
* (METIS's node bisector applied recursively to compute the separator tree
* and constraint sets, followed by CCOLAMD using the constraints). Usually
* finds better orderings than METIS_NodeND, but takes longer.
*/
UF_long amesos_cholmod_nested_dissection /* returns # of components */
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to order */
int *fset, /* subset of 0:(A->ncol)-1 */
size_t fsize, /* size of fset */
/* ---- output --- */
int *Perm, /* size A->nrow, output permutation */
int *CParent, /* size A->nrow. On output, CParent [c] is the parent
* of component c, or EMPTY if c is a root, and where
* c is in the range 0 to # of components minus 1 */
int *Cmember, /* size A->nrow. Cmember [j] = c if node j of A is
* in component c */
/* --------------- */
cholmod_common *Common
) ;
UF_long amesos_cholmod_l_nested_dissection (cholmod_sparse *, UF_long *, size_t,
UF_long *, UF_long *, UF_long *, cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_metis */
/* -------------------------------------------------------------------------- */
/* Order A, AA', or A(:,f)*A(:,f)' using METIS_NodeND. */
int amesos_cholmod_metis
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to order */
int *fset, /* subset of 0:(A->ncol)-1 */
size_t fsize, /* size of fset */
int postorder, /* if TRUE, follow with etree or coletree postorder */
/* ---- output --- */
int *Perm, /* size A->nrow, output permutation */
/* --------------- */
cholmod_common *Common
) ;
int amesos_cholmod_l_metis (cholmod_sparse *, UF_long *, size_t, int, UF_long *,
cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_ccolamd */
/* -------------------------------------------------------------------------- */
/* Order AA' or A(:,f)*A(:,f)' using CCOLAMD. */
int amesos_cholmod_ccolamd
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to order */
int *fset, /* subset of 0:(A->ncol)-1 */
size_t fsize, /* size of fset */
int *Cmember, /* size A->nrow. Cmember [i] = c if row i is in the
* constraint set c. c must be >= 0. The # of
* constraint sets is max (Cmember) + 1. If Cmember is
* NULL, then it is interpretted as Cmember [i] = 0 for
* all i */
/* ---- output --- */
int *Perm, /* size A->nrow, output permutation */
/* --------------- */
cholmod_common *Common
) ;
int amesos_cholmod_l_ccolamd (cholmod_sparse *, UF_long *, size_t, UF_long *,
UF_long *, cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_csymamd */
/* -------------------------------------------------------------------------- */
/* Order A using CSYMAMD. */
int amesos_cholmod_csymamd
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to order */
/* ---- output --- */
int *Cmember, /* size nrow. see cholmod_ccolamd above */
int *Perm, /* size A->nrow, output permutation */
/* --------------- */
cholmod_common *Common
) ;
int amesos_cholmod_l_csymamd (cholmod_sparse *, UF_long *, UF_long *,
cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_camd */
/* -------------------------------------------------------------------------- */
/* Order A using CAMD. */
int amesos_cholmod_camd
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to order */
int *fset, /* subset of 0:(A->ncol)-1 */
size_t fsize, /* size of fset */
/* ---- output --- */
int *Cmember, /* size nrow. see cholmod_ccolamd above */
int *Perm, /* size A->nrow, output permutation */
/* --------------- */
cholmod_common *Common
) ;
int amesos_cholmod_l_camd (cholmod_sparse *, UF_long *, size_t, UF_long *, UF_long *,
cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_bisect */
/* -------------------------------------------------------------------------- */
/* Finds a node bisector of A, A*A', A(:,f)*A(:,f)'. */
UF_long amesos_cholmod_bisect /* returns # of nodes in separator */
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to bisect */
int *fset, /* subset of 0:(A->ncol)-1 */
size_t fsize, /* size of fset */
int compress, /* if TRUE, compress the graph first */
/* ---- output --- */
int *Partition, /* size A->nrow. Node i is in the left graph if
* Partition [i] = 0, the right graph if 1, and in the
* separator if 2. */
/* --------------- */
cholmod_common *Common
) ;
UF_long amesos_cholmod_l_bisect (cholmod_sparse *, UF_long *, size_t, int, UF_long *,
cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_metis_bisector */
/* -------------------------------------------------------------------------- */
/* Find a set of nodes that bisects the graph of A or AA' (direct interface
* to METIS_NodeComputeSeparator). */
UF_long amesos_cholmod_metis_bisector /* returns separator size */
(
/* ---- input ---- */
cholmod_sparse *A, /* matrix to bisect */
int *Anw, /* size A->nrow, node weights */
int *Aew, /* size nz, edge weights */
/* ---- output --- */
int *Partition, /* size A->nrow. see cholmod_bisect above. */
/* --------------- */
cholmod_common *Common
) ;
UF_long amesos_cholmod_l_metis_bisector (cholmod_sparse *, UF_long *, UF_long *,
UF_long *, cholmod_common *) ;
/* -------------------------------------------------------------------------- */
/* cholmod_collapse_septree */
/* -------------------------------------------------------------------------- */
/* Collapse nodes in a separator tree. */
UF_long amesos_cholmod_collapse_septree
(
/* ---- input ---- */
size_t n, /* # of nodes in the graph */
size_t ncomponents, /* # of nodes in the separator tree (must be <= n) */
double nd_oksep, /* collapse if #sep >= nd_oksep * #nodes in subtree */
size_t nd_small, /* collapse if #nodes in subtree < nd_small */
/* ---- in/out --- */
int *CParent, /* size ncomponents; from cholmod_nested_dissection */
int *Cmember, /* size n; from cholmod_nested_dissection */
/* --------------- */
cholmod_common *Common
) ;
UF_long amesos_cholmod_l_collapse_septree (size_t, size_t, double, size_t, UF_long *,
UF_long *, cholmod_common *) ;
#endif
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