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// ***********************************************************************
//
// Anasazi: Block Eigensolvers Package
// Copyright (2004) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// This library is free software; you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as
// published by the Free Software Foundation; either version 2.1 of the
// License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful, but
// WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
// USA
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
// @HEADER
/*! \file AnasaziBlockDavidson.hpp
\brief Implementation of the block Davidson method
*/
#ifndef ANASAZI_BLOCK_DAVIDSON_HPP
#define ANASAZI_BLOCK_DAVIDSON_HPP
#include "AnasaziTypes.hpp"
#include "AnasaziEigensolver.hpp"
#include "AnasaziMultiVecTraits.hpp"
#include "AnasaziOperatorTraits.hpp"
#include "Teuchos_ScalarTraits.hpp"
#include "AnasaziMatOrthoManager.hpp"
#include "AnasaziSolverUtils.hpp"
#include "Teuchos_LAPACK.hpp"
#include "Teuchos_BLAS.hpp"
#include "Teuchos_SerialDenseMatrix.hpp"
#include "Teuchos_ParameterList.hpp"
#include "Teuchos_TimeMonitor.hpp"
/*! \class Anasazi::BlockDavidson
\brief This class implements a Block Davidson iteration, a preconditioned iteration for solving linear Hermitian eigenproblems.
This method is described in <em>A Comparison of Eigensolvers for
Large-scale 3D Modal Analysis Using AMG-Preconditioned Iterative
Methods</em>, P. Arbenz, U. L. Hetmaniuk, R. B. Lehoucq, R. S.
Tuminaro, Internat. J. for Numer. Methods Engrg., 64, pp. 204-236
(2005)
\ingroup anasazi_solver_framework
\author Chris Baker, Ulrich Hetmaniuk, Rich Lehoucq, Heidi Thornquist
*/
namespace Anasazi {
//! @name BlockDavidson Structures
//@{
/** \brief Structure to contain pointers to BlockDavidson state variables.
*
* This struct is utilized by BlockDavidson::initialize() and BlockDavidson::getState().
*/
template <class ScalarType, class MV>
struct BlockDavidsonState {
/*! \brief The current dimension of the solver.
*
* This should always be equal to BlockDavdison::getCurSubspaceDim()
*/
int curDim;
/*! \brief The basis for the Krylov space.
*
* V has BlockDavidson::getMaxSubspaceDim() vectors, but only the first \c curDim are valid.
*/
Teuchos::RCP<const MV> V;
//! The current eigenvectors.
Teuchos::RCP<const MV> X;
//! The image of the current eigenvectors under K.
Teuchos::RCP<const MV> KX;
//! The image of the current eigenvectors under M, or Teuchos::null if M was not specified.
Teuchos::RCP<const MV> MX;
//! The current residual vectors
Teuchos::RCP<const MV> R;
/*! \brief The current preconditioned residual vectors.
*
* H is a pointer into V, and is only useful when BlockDavidson::iterate() throw a BlockDavidsonOrthoFailure exception.
*/
Teuchos::RCP<const MV> H;
//! The current Ritz values. This vector is a copy of the internal data.
Teuchos::RCP<const std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> > T;
/*! \brief The current projected K matrix.
*
* KK is of order BlockDavidson::getMaxSubspaceDim(), but only the principal submatrix of order \c curDim is meaningful. It is Hermitian in memory.
*
*/
Teuchos::RCP<const Teuchos::SerialDenseMatrix<int,ScalarType> > KK;
BlockDavidsonState() : curDim(0), V(Teuchos::null),
X(Teuchos::null), KX(Teuchos::null), MX(Teuchos::null),
R(Teuchos::null), H(Teuchos::null),
T(Teuchos::null), KK(Teuchos::null) {}
};
//@}
//! @name BlockDavidson Exceptions
//@{
/** \brief BlockDavidsonInitFailure is thrown when the BlockDavidson solver is unable to
* generate an initial iterate in the BlockDavidson::initialize() routine.
*
* This exception is thrown from the BlockDavidson::initialize() method, which is
* called by the user or from the BlockDavidson::iterate() method if isInitialized()
* == \c false.
*
* In the case that this exception is thrown,
* BlockDavidson::isInitialized() will be \c false and the user will need to provide
* a new initial iterate to the solver.
*
*/
class BlockDavidsonInitFailure : public AnasaziError {public:
BlockDavidsonInitFailure(const std::string& what_arg) : AnasaziError(what_arg)
{}};
/** \brief BlockDavidsonOrthoFailure is thrown when the orthogonalization manager is
* unable to orthogonalize the preconditioned residual against (a.k.a. \c H)
* the current basis (a.k.a. \c V).
*
* This exception is thrown from the BlockDavidson::iterate() method.
*
*/
class BlockDavidsonOrthoFailure : public AnasaziError {public:
BlockDavidsonOrthoFailure(const std::string& what_arg) : AnasaziError(what_arg)
{}};
//@}
template <class ScalarType, class MV, class OP>
class BlockDavidson : public Eigensolver<ScalarType,MV,OP> {
public:
//! @name Constructor/Destructor
//@{
/*! \brief %BlockDavidson constructor with eigenproblem, solver utilities, and parameter list of solver options.
*
* This constructor takes pointers required by the eigensolver, in addition
* to a parameter list of options for the eigensolver. These options include the following:
* - "Block Size" - an \c int specifying the block size used by the algorithm. This can also be specified using the setBlockSize() method.
* - "Num Blocks" - an \c int specifying the maximum number of blocks allocated for the solver basis.
*/
BlockDavidson( const Teuchos::RCP<Eigenproblem<ScalarType,MV,OP> > &problem,
const Teuchos::RCP<SortManager<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> > &sorter,
const Teuchos::RCP<OutputManager<ScalarType> > &printer,
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > &tester,
const Teuchos::RCP<MatOrthoManager<ScalarType,MV,OP> > &ortho,
Teuchos::ParameterList ¶ms
);
//! %Anasazi::BlockDavidson destructor.
virtual ~BlockDavidson();
//@}
//! @name Solver methods
//@{
/*! \brief This method performs %BlockDavidson iterations until the status
* test indicates the need to stop or an error occurs (in which case, an
* appropriate exception is thrown).
*
* iterate() will first determine whether the solver is uninitialized; if
* not, it will call initialize(). After
* initialization, the solver performs block Davidson iterations until the
* status test evaluates as ::Passed, at which point the method returns to
* the caller.
*
* The block Davidson iteration proceeds as follows:
* -# The current residual (R) is preconditioned to form H
* -# H is orthogonalized against the auxiliary vectors and the previous basis vectors, and made orthonormal.
* -# The current basis is expanded with H and used to project the problem matrix.
* -# The projected eigenproblem is solved, and the desired eigenvectors and eigenvalues are selected.
* -# These are used to form the new eigenvector estimates (X).
* -# The new residual (R) is formed.
*
* The status test is queried at the beginning of the iteration.
*
* Possible exceptions thrown include std::invalid_argument or
* one of the BlockDavidson-specific exceptions.
*/
void iterate();
/*! \brief Initialize the solver to an iterate, optionally providing the
* current basis and projected problem matrix, the current Ritz vectors and values,
* and the current residual.
*
* The %BlockDavidson eigensolver contains a certain amount of state,
* including the current Krylov basis, the current eigenvectors,
* the current residual, etc. (see getState())
*
* initialize() gives the user the opportunity to manually set these,
* although this must be done with caution, as the validity of the
* user input will not be checked.
*
* Only the first <tt>newstate.curDim</tt> columns of <tt>newstate.V</tt>
* and <tt>newstate.KK</tt> and the first <tt>newstate.curDim</tt> rows of
* <tt>newstate.KK</tt> will be used.
*
* If <tt>newstate.V == getState().V</tt>, then the data is not copied. The
* same holds for <tt>newstate.KK</tt>, <tt>newstate.X</tt>,
* <tt>newstate.KX</tt>, <tt>newstate.MX</tt>, and <tt>newstate.R</tt> Only the
* upper triangular half of <tt>newstate.KK</tt> is used to initialize the
* state of the solver.
*
* \post
* <li>isInitialized() == \c true (see post-conditions of isInitialize())
*
* The user has the option of specifying any component of the state using
* initialize(). However, these arguments are assumed to match the
* post-conditions specified under isInitialized(). Any component of the
* state (i.e., KX) not given to initialize() will be generated.
*
* Note, for any pointer in \c newstate which directly points to the multivectors in
* the solver, the data is not copied.
*/
void initialize(BlockDavidsonState<ScalarType,MV>& newstate);
/*! \brief Initialize the solver with the initial vectors from the eigenproblem
* or random data.
*/
void initialize();
/*! \brief Indicates whether the solver has been initialized or not.
*
* \return bool indicating the state of the solver.
* \post
* If isInitialized() == \c true:
* - getCurSubspaceDim() > 0 and is a multiple of getBlockSize()
* - the first getCurSubspaceDim() vectors of V are orthogonal to auxiliary vectors and have orthonormal columns
* - the principal submatrix of order getCurSubspaceDim() of KK contains the project eigenproblem matrix
* - X contains the Ritz vectors with respect to the current Krylov basis
* - T contains the Ritz values with respect to the current Krylov basis
* - KX == Op*X
* - MX == M*X if M != Teuchos::null\n
* Otherwise, MX == Teuchos::null
* - R contains the residual vectors with respect to X
*/
bool isInitialized() const;
/*! \brief Get access to the current state of the eigensolver.
*
* The data is only valid if isInitialized() == \c true.
*
* The data for the preconditioned residual is only meaningful in the
* scenario that the solver throws a ::BlockDavidsonRitzFailure exception
* during iterate().
*
* \returns A BlockDavidsonState object containing const pointers to the current
* solver state. Note, these are direct pointers to the multivectors; they are not
* pointers to views of the multivectors.
*/
BlockDavidsonState<ScalarType,MV> getState() const;
//@}
//! @name Status methods
//@{
//! \brief Get the current iteration count.
int getNumIters() const;
//! \brief Reset the iteration count.
void resetNumIters();
/*! \brief Get access to the current Ritz vectors.
\return A multivector with getBlockSize() vectors containing
the sorted Ritz vectors corresponding to the most significant Ritz values.
The i-th vector of the return corresponds to the i-th Ritz vector; there is no need to use
getRitzIndex().
*/
Teuchos::RCP<const MV> getRitzVectors();
/*! \brief Get the Ritz values for the previous iteration.
*
* \return A vector of length getCurSubspaceDim() containing the Ritz values from the
* previous projected eigensolve.
*/
std::vector<Value<ScalarType> > getRitzValues();
/*! \brief Get the index used for extracting individual Ritz vectors from getRitzVectors().
*
* Because BlockDavidson is a Hermitian solver, all Ritz values are real and all Ritz vectors can be represented in a
* single column of a multivector. Therefore, getRitzIndex() is not needed when using the output from getRitzVectors().
*
* \return An \c int vector of size getCurSubspaceDim() composed of zeros.
*/
std::vector<int> getRitzIndex();
/*! \brief Get the current residual norms, computing the norms if they are not up-to-date with the current residual vectors.
*
* \return A vector of length getCurSubspaceDim() containing the norms of the
* residuals, with respect to the orthogonalization manager's norm() method.
*/
std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> getResNorms();
/*! \brief Get the current residual 2-norms, computing the norms if they are not up-to-date with the current residual vectors.
*
* \return A vector of length getCurSubspaceDim() containing the 2-norms of the
* current residuals.
*/
std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> getRes2Norms();
/*! \brief Get the 2-norms of the residuals.
*
* The Ritz residuals are not defined for the %LOBPCG iteration. Hence, this method returns the
* 2-norms of the direct residuals, and is equivalent to calling getRes2Norms().
*
* \return A vector of length getBlockSize() containing the 2-norms of the direct residuals.
*/
std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> getRitzRes2Norms();
/*! \brief Get the dimension of the search subspace used to generate the current eigenvectors and eigenvalues.
*
* \return An integer specifying the rank of the Krylov subspace currently in use by the eigensolver. If isInitialized() == \c false,
* the return is 0. Otherwise, it will be some strictly positive multiple of getBlockSize().
*/
int getCurSubspaceDim() const;
//! Get the maximum dimension allocated for the search subspace. For %BlockDavidson, this always returns numBlocks*blockSize.
int getMaxSubspaceDim() const;
//@}
//! @name Accessor routines from Eigensolver
//@{
//! Set a new StatusTest for the solver.
void setStatusTest(Teuchos::RCP<StatusTest<ScalarType,MV,OP> > test);
//! Get the current StatusTest used by the solver.
Teuchos::RCP<StatusTest<ScalarType,MV,OP> > getStatusTest() const;
//! Get a constant reference to the eigenvalue problem.
const Eigenproblem<ScalarType,MV,OP>& getProblem() const;
/*! \brief Set the blocksize.
*
* This method is required to support the interface provided by Eigensolver. However, the preferred method
* of setting the allocated size for the BlockDavidson eigensolver is setSize(). In fact, setBlockSize()
* simply calls setSize(), maintaining the current number of blocks.
*
* The block size determines the number of Ritz vectors and values that are computed on each iteration, thereby
* determining the increase in the Krylov subspace at each iteration.
*/
void setBlockSize(int blockSize);
//! Get the blocksize used by the iterative solver.
int getBlockSize() const;
/*! \brief Set the auxiliary vectors for the solver.
*
* Because the current basis V cannot be assumed
* orthogonal to the new auxiliary vectors, a call to setAuxVecs() will
* reset the solver to the uninitialized state. This happens only in the
* case where the new auxiliary vectors have a combined dimension of
* greater than zero.
*
* In order to preserve the current state, the user will need to extract
* it from the solver using getState(), orthogonalize it against the
* new auxiliary vectors, and reinitialize using initialize().
*/
void setAuxVecs(const Teuchos::Array<Teuchos::RCP<const MV> > &auxvecs);
//! Get the auxiliary vectors for the solver.
Teuchos::Array<Teuchos::RCP<const MV> > getAuxVecs() const;
//@}
//! @name BlockDavidson-specific accessor routines
//@{
/*! \brief Set the blocksize and number of blocks to be used by the
* iterative solver in solving this eigenproblem.
*
* Changing either the block size or the number of blocks will reset the
* solver to an uninitialized state.
*
* The requested block size must be strictly positive; the number of blocks must be
* greater than one. Invalid arguments will result in a std::invalid_argument exception.
*/
void setSize(int blockSize, int numBlocks);
//@}
//! @name Output methods
//@{
//! This method requests that the solver print out its current status to the given output stream.
void currentStatus(std::ostream &os);
//@}
private:
//
// Convenience typedefs
//
typedef SolverUtils<ScalarType,MV,OP> Utils;
typedef MultiVecTraits<ScalarType,MV> MVT;
typedef OperatorTraits<ScalarType,MV,OP> OPT;
typedef Teuchos::ScalarTraits<ScalarType> SCT;
typedef typename SCT::magnitudeType MagnitudeType;
const MagnitudeType ONE;
const MagnitudeType ZERO;
const MagnitudeType NANVAL;
//
// Internal structs
//
struct CheckList {
bool checkV;
bool checkX, checkMX, checkKX;
bool checkH, checkMH, checkKH;
bool checkR, checkQ;
bool checkKK;
CheckList() : checkV(false),
checkX(false),checkMX(false),checkKX(false),
checkH(false),checkMH(false),checkKH(false),
checkR(false),checkQ(false),checkKK(false) {};
};
//
// Internal methods
//
std::string accuracyCheck(const CheckList &chk, const std::string &where) const;
//
// Classes inputed through constructor that define the eigenproblem to be solved.
//
const Teuchos::RCP<Eigenproblem<ScalarType,MV,OP> > problem_;
const Teuchos::RCP<SortManager<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> > sm_;
const Teuchos::RCP<OutputManager<ScalarType> > om_;
Teuchos::RCP<StatusTest<ScalarType,MV,OP> > tester_;
const Teuchos::RCP<MatOrthoManager<ScalarType,MV,OP> > orthman_;
//
// Information obtained from the eigenproblem
//
Teuchos::RCP<const OP> Op_;
Teuchos::RCP<const OP> MOp_;
Teuchos::RCP<const OP> Prec_;
bool hasM_;
//
// Internal timers
//
Teuchos::RCP<Teuchos::Time> timerOp_, timerMOp_, timerPrec_,
timerSortEval_, timerDS_,
timerLocal_, timerCompRes_,
timerOrtho_, timerInit_;
//
// Counters
//
int count_ApplyOp_, count_ApplyM_, count_ApplyPrec_;
//
// Algorithmic parameters.
//
// blockSize_ is the solver block size; it controls the number of eigenvectors that
// we compute, the number of residual vectors that we compute, and therefore the number
// of vectors added to the basis on each iteration.
int blockSize_;
// numBlocks_ is the size of the allocated space for the Krylov basis, in blocks.
int numBlocks_;
//
// Current solver state
//
// initialized_ specifies that the basis vectors have been initialized and the iterate() routine
// is capable of running; _initialize is controlled by the initialize() member method
// For the implications of the state of initialized_, please see documentation for initialize()
bool initialized_;
//
// curDim_ reflects how much of the current basis is valid
// NOTE: 0 <= curDim_ <= blockSize_*numBlocks_
// this also tells us how many of the values in theta_ are valid Ritz values
int curDim_;
//
// State Multivecs
// H_,KH_,MH_ will not own any storage
// H_ will occasionally point at the current block of vectors in the basis V_
// MH_,KH_ will occasionally point at MX_,KX_ when they are used as temporary storage
Teuchos::RCP<MV> X_, KX_, MX_, R_,
H_, KH_, MH_,
V_;
//
// Projected matrices
//
Teuchos::RCP<Teuchos::SerialDenseMatrix<int,ScalarType> > KK_;
//
// auxiliary vectors
Teuchos::Array<Teuchos::RCP<const MV> > auxVecs_;
int numAuxVecs_;
//
// Number of iterations that have been performed.
int iter_;
//
// Current eigenvalues, residual norms
std::vector<MagnitudeType> theta_, Rnorms_, R2norms_;
//
// are the residual norms current with the residual?
bool Rnorms_current_, R2norms_current_;
};
//////////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////////
//
// Implementations
//
//////////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////////
// Constructor
template <class ScalarType, class MV, class OP>
BlockDavidson<ScalarType,MV,OP>::BlockDavidson(
const Teuchos::RCP<Eigenproblem<ScalarType,MV,OP> > &problem,
const Teuchos::RCP<SortManager<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> > &sorter,
const Teuchos::RCP<OutputManager<ScalarType> > &printer,
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > &tester,
const Teuchos::RCP<MatOrthoManager<ScalarType,MV,OP> > &ortho,
Teuchos::ParameterList ¶ms
) :
ONE(Teuchos::ScalarTraits<MagnitudeType>::one()),
ZERO(Teuchos::ScalarTraits<MagnitudeType>::zero()),
NANVAL(Teuchos::ScalarTraits<MagnitudeType>::nan()),
// problem, tools
problem_(problem),
sm_(sorter),
om_(printer),
tester_(tester),
orthman_(ortho),
// timers, counters
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
timerOp_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Operation Op*x")),
timerMOp_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Operation M*x")),
timerPrec_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Operation Prec*x")),
timerSortEval_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Sorting eigenvalues")),
timerDS_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Direct solve")),
timerLocal_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Local update")),
timerCompRes_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Computing residuals")),
timerOrtho_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Orthogonalization")),
timerInit_(Teuchos::TimeMonitor::getNewTimer("Anasazi: BlockDavidson::Initialization")),
#endif
count_ApplyOp_(0),
count_ApplyM_(0),
count_ApplyPrec_(0),
// internal data
blockSize_(0),
numBlocks_(0),
initialized_(false),
curDim_(0),
auxVecs_( Teuchos::Array<Teuchos::RCP<const MV> >(0) ),
numAuxVecs_(0),
iter_(0),
Rnorms_current_(false),
R2norms_current_(false)
{
TEUCHOS_TEST_FOR_EXCEPTION(problem_ == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::constructor: user passed null problem pointer.");
TEUCHOS_TEST_FOR_EXCEPTION(sm_ == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::constructor: user passed null sort manager pointer.");
TEUCHOS_TEST_FOR_EXCEPTION(om_ == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::constructor: user passed null output manager pointer.");
TEUCHOS_TEST_FOR_EXCEPTION(tester_ == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::constructor: user passed null status test pointer.");
TEUCHOS_TEST_FOR_EXCEPTION(orthman_ == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::constructor: user passed null orthogonalization manager pointer.");
TEUCHOS_TEST_FOR_EXCEPTION(problem_->isProblemSet() == false, std::invalid_argument,
"Anasazi::BlockDavidson::constructor: problem is not set.");
TEUCHOS_TEST_FOR_EXCEPTION(problem_->isHermitian() == false, std::invalid_argument,
"Anasazi::BlockDavidson::constructor: problem is not hermitian.");
// get the problem operators
Op_ = problem_->getOperator();
TEUCHOS_TEST_FOR_EXCEPTION(Op_ == Teuchos::null, std::invalid_argument,
"Anasazi::BlockDavidson::constructor: problem provides no operator.");
MOp_ = problem_->getM();
Prec_ = problem_->getPrec();
hasM_ = (MOp_ != Teuchos::null);
// set the block size and allocate data
int bs = params.get("Block Size", problem_->getNEV());
int nb = params.get("Num Blocks", 2);
setSize(bs,nb);
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Destructor
template <class ScalarType, class MV, class OP>
BlockDavidson<ScalarType,MV,OP>::~BlockDavidson() {}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Set the block size
// This simply calls setSize(), modifying the block size while retaining the number of blocks.
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::setBlockSize (int blockSize)
{
setSize(blockSize,numBlocks_);
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Return the current auxiliary vectors
template <class ScalarType, class MV, class OP>
Teuchos::Array<Teuchos::RCP<const MV> > BlockDavidson<ScalarType,MV,OP>::getAuxVecs() const {
return auxVecs_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return the current block size
template <class ScalarType, class MV, class OP>
int BlockDavidson<ScalarType,MV,OP>::getBlockSize() const {
return(blockSize_);
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return eigenproblem
template <class ScalarType, class MV, class OP>
const Eigenproblem<ScalarType,MV,OP>& BlockDavidson<ScalarType,MV,OP>::getProblem() const {
return(*problem_);
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return max subspace dim
template <class ScalarType, class MV, class OP>
int BlockDavidson<ScalarType,MV,OP>::getMaxSubspaceDim() const {
return blockSize_*numBlocks_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return current subspace dim
template <class ScalarType, class MV, class OP>
int BlockDavidson<ScalarType,MV,OP>::getCurSubspaceDim() const {
if (!initialized_) return 0;
return curDim_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return ritz residual 2-norms
template <class ScalarType, class MV, class OP>
std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType>
BlockDavidson<ScalarType,MV,OP>::getRitzRes2Norms() {
return this->getRes2Norms();
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return ritz index
template <class ScalarType, class MV, class OP>
std::vector<int> BlockDavidson<ScalarType,MV,OP>::getRitzIndex() {
std::vector<int> ret(curDim_,0);
return ret;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return ritz values
template <class ScalarType, class MV, class OP>
std::vector<Value<ScalarType> > BlockDavidson<ScalarType,MV,OP>::getRitzValues() {
std::vector<Value<ScalarType> > ret(curDim_);
for (int i=0; i<curDim_; ++i) {
ret[i].realpart = theta_[i];
ret[i].imagpart = ZERO;
}
return ret;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return pointer to ritz vectors
template <class ScalarType, class MV, class OP>
Teuchos::RCP<const MV> BlockDavidson<ScalarType,MV,OP>::getRitzVectors() {
return X_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// reset number of iterations
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::resetNumIters() {
iter_=0;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return number of iterations
template <class ScalarType, class MV, class OP>
int BlockDavidson<ScalarType,MV,OP>::getNumIters() const {
return(iter_);
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// return state pointers
template <class ScalarType, class MV, class OP>
BlockDavidsonState<ScalarType,MV> BlockDavidson<ScalarType,MV,OP>::getState() const {
BlockDavidsonState<ScalarType,MV> state;
state.curDim = curDim_;
state.V = V_;
state.X = X_;
state.KX = KX_;
if (hasM_) {
state.MX = MX_;
}
else {
state.MX = Teuchos::null;
}
state.R = R_;
state.H = H_;
state.KK = KK_;
if (curDim_ > 0) {
state.T = Teuchos::rcp(new std::vector<MagnitudeType>(theta_.begin(),theta_.begin()+curDim_) );
} else {
state.T = Teuchos::rcp(new std::vector<MagnitudeType>(0));
}
return state;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Return initialized state
template <class ScalarType, class MV, class OP>
bool BlockDavidson<ScalarType,MV,OP>::isInitialized() const { return initialized_; }
//////////////////////////////////////////////////////////////////////////////////////////////////
// Set the block size and make necessary adjustments.
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::setSize (int blockSize, int numBlocks)
{
// time spent here counts towards timerInit_
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor initimer( *timerInit_ );
#endif
// This routine only allocates space; it doesn't not perform any computation
// any change in size will invalidate the state of the solver.
TEUCHOS_TEST_FOR_EXCEPTION(blockSize < 1, std::invalid_argument, "Anasazi::BlockDavidson::setSize(blocksize,numblocks): blocksize must be strictly positive.");
TEUCHOS_TEST_FOR_EXCEPTION(numBlocks < 2, std::invalid_argument, "Anasazi::BlockDavidson::setSize(blocksize,numblocks): numblocks must be greater than one.");
if (blockSize == blockSize_ && numBlocks == numBlocks_) {
// do nothing
return;
}
blockSize_ = blockSize;
numBlocks_ = numBlocks;
Teuchos::RCP<const MV> tmp;
// grab some Multivector to Clone
// in practice, getInitVec() should always provide this, but it is possible to use a
// Eigenproblem with nothing in getInitVec() by manually initializing with initialize();
// in case of that strange scenario, we will try to Clone from X_ first, then resort to getInitVec()
if (X_ != Teuchos::null) { // this is equivalent to blockSize_ > 0
tmp = X_;
}
else {
tmp = problem_->getInitVec();
TEUCHOS_TEST_FOR_EXCEPTION(tmp == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::setSize(): eigenproblem did not specify initial vectors to clone from.");
}
TEUCHOS_TEST_FOR_EXCEPTION(numAuxVecs_+blockSize*static_cast<ptrdiff_t>(numBlocks) > MVT::GetGlobalLength(*tmp),std::invalid_argument,
"Anasazi::BlockDavidson::setSize(): max subspace dimension and auxilliary subspace too large.");
//////////////////////////////////
// blockSize dependent
//
// grow/allocate vectors
Rnorms_.resize(blockSize_,NANVAL);
R2norms_.resize(blockSize_,NANVAL);
//
// clone multivectors off of tmp
//
// free current allocation first, to make room for new allocation
X_ = Teuchos::null;
KX_ = Teuchos::null;
MX_ = Teuchos::null;
R_ = Teuchos::null;
V_ = Teuchos::null;
om_->print(Debug," >> Allocating X_\n");
X_ = MVT::Clone(*tmp,blockSize_);
om_->print(Debug," >> Allocating KX_\n");
KX_ = MVT::Clone(*tmp,blockSize_);
if (hasM_) {
om_->print(Debug," >> Allocating MX_\n");
MX_ = MVT::Clone(*tmp,blockSize_);
}
else {
MX_ = X_;
}
om_->print(Debug," >> Allocating R_\n");
R_ = MVT::Clone(*tmp,blockSize_);
//////////////////////////////////
// blockSize*numBlocks dependent
//
int newsd = blockSize_*numBlocks_;
theta_.resize(blockSize_*numBlocks_,NANVAL);
om_->print(Debug," >> Allocating V_\n");
V_ = MVT::Clone(*tmp,newsd);
KK_ = Teuchos::rcp( new Teuchos::SerialDenseMatrix<int,ScalarType>(newsd,newsd) );
om_->print(Debug," >> done allocating.\n");
initialized_ = false;
curDim_ = 0;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Set the auxiliary vectors
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::setAuxVecs(const Teuchos::Array<Teuchos::RCP<const MV> > &auxvecs) {
typedef typename Teuchos::Array<Teuchos::RCP<const MV> >::iterator tarcpmv;
// set new auxiliary vectors
auxVecs_ = auxvecs;
numAuxVecs_ = 0;
for (tarcpmv i=auxVecs_.begin(); i != auxVecs_.end(); ++i) {
numAuxVecs_ += MVT::GetNumberVecs(**i);
}
// If the solver has been initialized, V is not necessarily orthogonal to new auxiliary vectors
if (numAuxVecs_ > 0 && initialized_) {
initialized_ = false;
}
if (om_->isVerbosity( Debug ) ) {
CheckList chk;
chk.checkQ = true;
om_->print( Debug, accuracyCheck(chk, ": in setAuxVecs()") );
}
}
//////////////////////////////////////////////////////////////////////////////////////////////////
/* Initialize the state of the solver
*
* POST-CONDITIONS:
*
* V_ is orthonormal, orthogonal to auxVecs_, for first curDim_ vectors
* theta_ contains Ritz w.r.t. V_(1:curDim_)
* X is Ritz vectors w.r.t. V_(1:curDim_)
* KX = Op*X
* MX = M*X if hasM_
* R = KX - MX*diag(theta_)
*
*/
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::initialize(BlockDavidsonState<ScalarType,MV>& newstate)
{
// NOTE: memory has been allocated by setBlockSize(). Use setBlock below; do not Clone
// NOTE: Overall time spent in this routine is counted to timerInit_; portions will also be counted towards other primitives
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor inittimer( *timerInit_ );
#endif
std::vector<int> bsind(blockSize_);
for (int i=0; i<blockSize_; ++i) bsind[i] = i;
Teuchos::BLAS<int,ScalarType> blas;
// in BlockDavidson, V is primary
// the order of dependence follows like so.
// --init-> V,KK
// --ritz analysis-> theta,X
// --op apply-> KX,MX
// --compute-> R
//
// if the user specifies all data for a level, we will accept it.
// otherwise, we will generate the whole level, and all subsequent levels.
//
// the data members are ordered based on dependence, and the levels are
// partitioned according to the amount of work required to produce the
// items in a level.
//
// inconsistent multivectors widths and lengths will not be tolerated, and
// will be treated with exceptions.
//
// for multivector pointers in newstate which point directly (as opposed to indirectly, via a view) to
// multivectors in the solver, the copy will not be affected.
// set up V and KK: get them from newstate if user specified them
// otherwise, set them manually
Teuchos::RCP<MV> lclV;
Teuchos::RCP<Teuchos::SerialDenseMatrix<int,ScalarType> > lclKK;
if (newstate.V != Teuchos::null && newstate.KK != Teuchos::null) {
TEUCHOS_TEST_FOR_EXCEPTION( MVT::GetGlobalLength(*newstate.V) != MVT::GetGlobalLength(*V_), std::invalid_argument,
"Anasazi::BlockDavidson::initialize(newstate): Vector length of V not correct." );
TEUCHOS_TEST_FOR_EXCEPTION( newstate.curDim < blockSize_, std::invalid_argument,
"Anasazi::BlockDavidson::initialize(newstate): Rank of new state must be at least blockSize().");
TEUCHOS_TEST_FOR_EXCEPTION( newstate.curDim > blockSize_*numBlocks_, std::invalid_argument,
"Anasazi::BlockDavidson::initialize(newstate): Rank of new state must be less than getMaxSubspaceDim().");
TEUCHOS_TEST_FOR_EXCEPTION( MVT::GetNumberVecs(*newstate.V) < newstate.curDim, std::invalid_argument,
"Anasazi::BlockDavidson::initialize(newstate): Multivector for basis in new state must be as large as specified state rank.");
curDim_ = newstate.curDim;
// pick an integral amount
curDim_ = (int)(curDim_ / blockSize_)*blockSize_;
TEUCHOS_TEST_FOR_EXCEPTION( curDim_ != newstate.curDim, std::invalid_argument,
"Anasazi::BlockDavidson::initialize(newstate): Rank of new state must be a multiple of getBlockSize().");
// check size of KK
TEUCHOS_TEST_FOR_EXCEPTION( newstate.KK->numRows() < curDim_ || newstate.KK->numCols() < curDim_, std::invalid_argument,
"Anasazi::BlockDavidson::initialize(newstate): Projected matrix in new state must be as large as specified state rank.");
// put data in V
std::vector<int> nevind(curDim_);
for (int i=0; i<curDim_; ++i) nevind[i] = i;
if (newstate.V != V_) {
if (curDim_ < MVT::GetNumberVecs(*newstate.V)) {
newstate.V = MVT::CloneView(*newstate.V,nevind);
}
MVT::SetBlock(*newstate.V,nevind,*V_);
}
lclV = MVT::CloneViewNonConst(*V_,nevind);
// put data into KK_
lclKK = Teuchos::rcp( new Teuchos::SerialDenseMatrix<int,ScalarType>(Teuchos::View,*KK_,curDim_,curDim_) );
if (newstate.KK != KK_) {
if (newstate.KK->numRows() > curDim_ || newstate.KK->numCols() > curDim_) {
newstate.KK = Teuchos::rcp( new Teuchos::SerialDenseMatrix<int,ScalarType>(Teuchos::View,*newstate.KK,curDim_,curDim_) );
}
lclKK->assign(*newstate.KK);
}
//
// make lclKK Hermitian in memory (copy the upper half to the lower half)
for (int j=0; j<curDim_-1; ++j) {
for (int i=j+1; i<curDim_; ++i) {
(*lclKK)(i,j) = SCT::conjugate((*lclKK)(j,i));
}
}
}
else {
// user did not specify one of V or KK
// get vectors from problem or generate something, projectAndNormalize
Teuchos::RCP<const MV> ivec = problem_->getInitVec();
TEUCHOS_TEST_FOR_EXCEPTION(ivec == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavdison::initialize(newstate): Eigenproblem did not specify initial vectors to clone from.");
// clear newstate so we won't use any data from it below
newstate.X = Teuchos::null;
newstate.MX = Teuchos::null;
newstate.KX = Teuchos::null;
newstate.R = Teuchos::null;
newstate.H = Teuchos::null;
newstate.T = Teuchos::null;
newstate.KK = Teuchos::null;
newstate.V = Teuchos::null;
newstate.curDim = 0;
curDim_ = MVT::GetNumberVecs(*ivec);
// pick the largest multiple of blockSize_
curDim_ = (int)(curDim_ / blockSize_)*blockSize_;
if (curDim_ > blockSize_*numBlocks_) {
// user specified too many vectors... truncate
// this produces a full subspace, but that is okay
curDim_ = blockSize_*numBlocks_;
}
bool userand = false;
if (curDim_ == 0) {
// we need at least blockSize_ vectors
// use a random multivec: ignore everything from InitVec
userand = true;
curDim_ = blockSize_;
}
// get pointers into V,KV,MV
// tmpVecs will be used below for M*V and K*V (not simultaneously)
// lclV has curDim vectors
// if there is space for lclV and tmpVecs in V_, point tmpVecs into V_
// otherwise, we must allocate space for these products
//
// get pointer to first curDim vector in V_
std::vector<int> dimind(curDim_);
for (int i=0; i<curDim_; ++i) dimind[i] = i;
lclV = MVT::CloneViewNonConst(*V_,dimind);
if (userand) {
// generate random vector data
MVT::MvRandom(*lclV);
}
else {
if (MVT::GetNumberVecs(*ivec) > curDim_) {
ivec = MVT::CloneView(*ivec,dimind);
}
// assign ivec to first part of lclV
MVT::SetBlock(*ivec,dimind,*lclV);
}
Teuchos::RCP<MV> tmpVecs;
if (curDim_*2 <= blockSize_*numBlocks_) {
// partition V_ = [lclV tmpVecs _leftover_]
std::vector<int> block2(curDim_);
for (int i=0; i<curDim_; ++i) block2[i] = curDim_+i;
tmpVecs = MVT::CloneViewNonConst(*V_,block2);
}
else {
// allocate space for tmpVecs
tmpVecs = MVT::Clone(*V_,curDim_);
}
// compute M*lclV if hasM_
if (hasM_) {
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerMOp_ );
#endif
OPT::Apply(*MOp_,*lclV,*tmpVecs);
count_ApplyM_ += curDim_;
}
// remove auxVecs from lclV and normalize it
if (auxVecs_.size() > 0) {
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOrtho_ );
#endif
Teuchos::Array<Teuchos::RCP<Teuchos::SerialDenseMatrix<int,ScalarType> > > dummyC;
int rank = orthman_->projectAndNormalizeMat(*lclV,auxVecs_,dummyC,Teuchos::null,tmpVecs);
TEUCHOS_TEST_FOR_EXCEPTION(rank != curDim_,BlockDavidsonInitFailure,
"Anasazi::BlockDavidson::initialize(): Couldn't generate initial basis of full rank.");
}
else {
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOrtho_ );
#endif
int rank = orthman_->normalizeMat(*lclV,Teuchos::null,tmpVecs);
TEUCHOS_TEST_FOR_EXCEPTION(rank != curDim_,BlockDavidsonInitFailure,
"Anasazi::BlockDavidson::initialize(): Couldn't generate initial basis of full rank.");
}
// compute K*lclV: we are re-using tmpVecs to store the result
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOp_ );
#endif
OPT::Apply(*Op_,*lclV,*tmpVecs);
count_ApplyOp_ += curDim_;
}
// generate KK
lclKK = Teuchos::rcp( new Teuchos::SerialDenseMatrix<int,ScalarType>(Teuchos::View,*KK_,curDim_,curDim_) );
MVT::MvTransMv(ONE,*lclV,*tmpVecs,*lclKK);
// clear tmpVecs
tmpVecs = Teuchos::null;
}
// X,theta require Ritz analysis; if we have to generate one of these, we might as well generate both
if (newstate.X != Teuchos::null && newstate.T != Teuchos::null) {
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetNumberVecs(*newstate.X) != blockSize_ || MVT::GetGlobalLength(*newstate.X) != MVT::GetGlobalLength(*X_),
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): Size of X must be consistent with block size and length of V.");
TEUCHOS_TEST_FOR_EXCEPTION((signed int)(newstate.T->size()) != curDim_,
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): Size of T must be consistent with dimension of V.");
if (newstate.X != X_) {
MVT::SetBlock(*newstate.X,bsind,*X_);
}
std::copy(newstate.T->begin(),newstate.T->end(),theta_.begin());
}
else {
// compute ritz vecs/vals
Teuchos::SerialDenseMatrix<int,ScalarType> S(curDim_,curDim_);
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerDS_ );
#endif
int rank = curDim_;
Utils::directSolver(curDim_, *lclKK, Teuchos::null, S, theta_, rank, 10);
// we want all ritz values back
TEUCHOS_TEST_FOR_EXCEPTION(rank != curDim_,BlockDavidsonInitFailure,
"Anasazi::BlockDavidson::initialize(newstate): Not enough Ritz vectors to initialize algorithm.");
}
// sort ritz pairs
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerSortEval_ );
#endif
std::vector<int> order(curDim_);
//
// sort the first curDim_ values in theta_
sm_->sort(theta_, Teuchos::rcpFromRef(order), curDim_); // don't catch exception
//
// apply the same ordering to the primitive ritz vectors
Utils::permuteVectors(order,S);
}
// compute eigenvectors
Teuchos::SerialDenseMatrix<int,ScalarType> S1(Teuchos::View,S,curDim_,blockSize_);
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerLocal_ );
#endif
// X <- lclV*S
MVT::MvTimesMatAddMv( ONE, *lclV, S1, ZERO, *X_ );
}
// we generated theta,X so we don't want to use the user's KX,MX
newstate.KX = Teuchos::null;
newstate.MX = Teuchos::null;
}
// done with local pointers
lclV = Teuchos::null;
lclKK = Teuchos::null;
// set up KX
if ( newstate.KX != Teuchos::null ) {
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetNumberVecs(*newstate.KX) != blockSize_,
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): vector length of newstate.KX not correct." );
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetGlobalLength(*newstate.KX) != MVT::GetGlobalLength(*X_),
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): newstate.KX must have at least block size vectors." );
if (newstate.KX != KX_) {
MVT::SetBlock(*newstate.KX,bsind,*KX_);
}
}
else {
// generate KX
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOp_ );
#endif
OPT::Apply(*Op_,*X_,*KX_);
count_ApplyOp_ += blockSize_;
}
// we generated KX; we will generate R as well
newstate.R = Teuchos::null;
}
// set up MX
if (hasM_) {
if ( newstate.MX != Teuchos::null ) {
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetNumberVecs(*newstate.MX) != blockSize_,
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): vector length of newstate.MX not correct." );
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetGlobalLength(*newstate.MX) != MVT::GetGlobalLength(*X_),
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): newstate.MX must have at least block size vectors." );
if (newstate.MX != MX_) {
MVT::SetBlock(*newstate.MX,bsind,*MX_);
}
}
else {
// generate MX
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOp_ );
#endif
OPT::Apply(*MOp_,*X_,*MX_);
count_ApplyOp_ += blockSize_;
}
// we generated MX; we will generate R as well
newstate.R = Teuchos::null;
}
}
else {
// the assignment MX_==X_ would be redundant; take advantage of this opportunity to debug a little
TEUCHOS_TEST_FOR_EXCEPTION(MX_ != X_, std::logic_error, "Anasazi::BlockDavidson::initialize(): solver invariant not satisfied (MX==X).");
}
// set up R
if (newstate.R != Teuchos::null) {
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetNumberVecs(*newstate.R) != blockSize_,
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): vector length of newstate.R not correct." );
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetGlobalLength(*newstate.R) != MVT::GetGlobalLength(*X_),
std::invalid_argument, "Anasazi::BlockDavidson::initialize(newstate): newstate.R must have at least block size vectors." );
if (newstate.R != R_) {
MVT::SetBlock(*newstate.R,bsind,*R_);
}
}
else {
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerCompRes_ );
#endif
// form R <- KX - MX*T
MVT::MvAddMv(ZERO,*KX_,ONE,*KX_,*R_);
Teuchos::SerialDenseMatrix<int,ScalarType> T(blockSize_,blockSize_);
T.putScalar(ZERO);
for (int i=0; i<blockSize_; ++i) T(i,i) = theta_[i];
MVT::MvTimesMatAddMv(-ONE,*MX_,T,ONE,*R_);
}
// R has been updated; mark the norms as out-of-date
Rnorms_current_ = false;
R2norms_current_ = false;
// finally, we are initialized
initialized_ = true;
if (om_->isVerbosity( Debug ) ) {
// Check almost everything here
CheckList chk;
chk.checkV = true;
chk.checkX = true;
chk.checkKX = true;
chk.checkMX = true;
chk.checkR = true;
chk.checkQ = true;
chk.checkKK = true;
om_->print( Debug, accuracyCheck(chk, ": after initialize()") );
}
// Print information on current status
if (om_->isVerbosity(Debug)) {
currentStatus( om_->stream(Debug) );
}
else if (om_->isVerbosity(IterationDetails)) {
currentStatus( om_->stream(IterationDetails) );
}
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// initialize the solver with default state
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::initialize()
{
BlockDavidsonState<ScalarType,MV> empty;
initialize(empty);
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Perform BlockDavidson iterations until the StatusTest tells us to stop.
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::iterate ()
{
//
// Initialize solver state
if (initialized_ == false) {
initialize();
}
// as a data member, this would be redundant and require synchronization with
// blockSize_ and numBlocks_; we'll use a constant here.
const int searchDim = blockSize_*numBlocks_;
Teuchos::BLAS<int,ScalarType> blas;
//
// The projected matrices are part of the state, but the eigenvectors are defined locally.
// S = Local eigenvectors (size: searchDim * searchDim
Teuchos::SerialDenseMatrix<int,ScalarType> S( searchDim, searchDim );
////////////////////////////////////////////////////////////////
// iterate until the status test tells us to stop.
// also break if our basis is full
while (tester_->checkStatus(this) != Passed && curDim_ < searchDim) {
// Print information on current iteration
if (om_->isVerbosity(Debug)) {
currentStatus( om_->stream(Debug) );
}
else if (om_->isVerbosity(IterationDetails)) {
currentStatus( om_->stream(IterationDetails) );
}
++iter_;
// get the current part of the basis
std::vector<int> curind(blockSize_);
for (int i=0; i<blockSize_; ++i) curind[i] = curDim_ + i;
H_ = MVT::CloneViewNonConst(*V_,curind);
// Apply the preconditioner on the residuals: H <- Prec*R
// H = Prec*R
if (Prec_ != Teuchos::null) {
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerPrec_ );
#endif
OPT::Apply( *Prec_, *R_, *H_ ); // don't catch the exception
count_ApplyPrec_ += blockSize_;
}
else {
std::vector<int> bsind(blockSize_);
for (int i=0; i<blockSize_; ++i) { bsind[i] = i; }
MVT::SetBlock(*R_,bsind,*H_);
}
// Apply the mass matrix on H
if (hasM_) {
// use memory at MX_ for temporary storage
MH_ = MX_;
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerMOp_ );
#endif
OPT::Apply( *MOp_, *H_, *MH_); // don't catch the exception
count_ApplyM_ += blockSize_;
}
else {
MH_ = H_;
}
// Get a view of the previous vectors
// this is used for orthogonalization and for computing V^H K H
std::vector<int> prevind(curDim_);
for (int i=0; i<curDim_; ++i) prevind[i] = i;
Teuchos::RCP<const MV> Vprev = MVT::CloneView(*V_,prevind);
// Orthogonalize H against the previous vectors and the auxiliary vectors, and normalize
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOrtho_ );
#endif
Teuchos::Array<Teuchos::RCP<const MV> > against = auxVecs_;
against.push_back(Vprev);
Teuchos::Array<Teuchos::RCP<Teuchos::SerialDenseMatrix<int,ScalarType> > > dummyC;
int rank = orthman_->projectAndNormalizeMat(*H_,against,
dummyC,
Teuchos::null,MH_);
TEUCHOS_TEST_FOR_EXCEPTION(rank != blockSize_,BlockDavidsonOrthoFailure,
"Anasazi::BlockDavidson::iterate(): unable to compute orthonormal basis for H.");
}
// Apply the stiffness matrix to H
{
// use memory at KX_ for temporary storage
KH_ = KX_;
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOp_ );
#endif
OPT::Apply( *Op_, *H_, *KH_); // don't catch the exception
count_ApplyOp_ += blockSize_;
}
if (om_->isVerbosity( Debug ) ) {
CheckList chk;
chk.checkH = true;
chk.checkMH = true;
chk.checkKH = true;
om_->print( Debug, accuracyCheck(chk, ": after ortho H") );
}
else if (om_->isVerbosity( OrthoDetails ) ) {
CheckList chk;
chk.checkH = true;
chk.checkMH = true;
chk.checkKH = true;
om_->print( OrthoDetails, accuracyCheck(chk,": after ortho H") );
}
// compute next part of the projected matrices
// this this in two parts
Teuchos::RCP<Teuchos::SerialDenseMatrix<int,ScalarType> > nextKK;
// Vprev*K*H
nextKK = Teuchos::rcp( new Teuchos::SerialDenseMatrix<int,ScalarType>(Teuchos::View,*KK_,curDim_,blockSize_,0,curDim_) );
MVT::MvTransMv(ONE,*Vprev,*KH_,*nextKK);
// H*K*H
nextKK = Teuchos::rcp( new Teuchos::SerialDenseMatrix<int,ScalarType>(Teuchos::View,*KK_,blockSize_,blockSize_,curDim_,curDim_) );
MVT::MvTransMv(ONE,*H_,*KH_,*nextKK);
//
// make sure that KK_ is Hermitian in memory
nextKK = Teuchos::null;
for (int i=curDim_; i<curDim_+blockSize_; ++i) {
for (int j=0; j<i; ++j) {
(*KK_)(i,j) = SCT::conjugate((*KK_)(j,i));
}
}
// V has been extended, and KK has been extended. Update basis dim and release all pointers.
curDim_ += blockSize_;
H_ = KH_ = MH_ = Teuchos::null;
Vprev = Teuchos::null;
if (om_->isVerbosity( Debug ) ) {
CheckList chk;
chk.checkKK = true;
om_->print( Debug, accuracyCheck(chk, ": after expanding KK") );
}
// Get pointer to complete basis
curind.resize(curDim_);
for (int i=0; i<curDim_; ++i) curind[i] = i;
Teuchos::RCP<const MV> curV = MVT::CloneView(*V_,curind);
// Perform spectral decomposition
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer(*timerDS_);
#endif
int nevlocal = curDim_;
int info = Utils::directSolver(curDim_,*KK_,Teuchos::null,S,theta_,nevlocal,10);
TEUCHOS_TEST_FOR_EXCEPTION(info != 0,std::logic_error,"Anasazi::BlockDavidson::iterate(): direct solve returned error code.");
// we did not ask directSolver to perform deflation, so nevLocal better be curDim_
TEUCHOS_TEST_FOR_EXCEPTION(nevlocal != curDim_,std::logic_error,"Anasazi::BlockDavidson::iterate(): direct solve did not compute all eigenvectors."); // this should never happen
}
// Sort ritz pairs
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerSortEval_ );
#endif
std::vector<int> order(curDim_);
//
// sort the first curDim_ values in theta_
sm_->sort(theta_, Teuchos::rcp(&order,false), curDim_); // don't catch exception
//
// apply the same ordering to the primitive ritz vectors
Teuchos::SerialDenseMatrix<int,ScalarType> curS(Teuchos::View,S,curDim_,curDim_);
Utils::permuteVectors(order,curS);
}
// Create a view matrix of the first blockSize_ vectors
Teuchos::SerialDenseMatrix<int,ScalarType> S1( Teuchos::View, S, curDim_, blockSize_ );
// Compute the new Ritz vectors
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerLocal_ );
#endif
MVT::MvTimesMatAddMv(ONE,*curV,S1,ZERO,*X_);
}
// Apply the stiffness matrix for the Ritz vectors
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerOp_ );
#endif
OPT::Apply( *Op_, *X_, *KX_); // don't catch the exception
count_ApplyOp_ += blockSize_;
}
// Apply the mass matrix for the Ritz vectors
if (hasM_) {
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerMOp_ );
#endif
OPT::Apply(*MOp_,*X_,*MX_);
count_ApplyM_ += blockSize_;
}
else {
MX_ = X_;
}
// Compute the residual
// R = KX - MX*diag(theta)
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *timerCompRes_ );
#endif
MVT::MvAddMv( ONE, *KX_, ZERO, *KX_, *R_ );
Teuchos::SerialDenseMatrix<int,ScalarType> T( blockSize_, blockSize_ );
for (int i = 0; i < blockSize_; ++i) {
T(i,i) = theta_[i];
}
MVT::MvTimesMatAddMv( -ONE, *MX_, T, ONE, *R_ );
}
// R has been updated; mark the norms as out-of-date
Rnorms_current_ = false;
R2norms_current_ = false;
// When required, monitor some orthogonalities
if (om_->isVerbosity( Debug ) ) {
// Check almost everything here
CheckList chk;
chk.checkV = true;
chk.checkX = true;
chk.checkKX = true;
chk.checkMX = true;
chk.checkR = true;
om_->print( Debug, accuracyCheck(chk, ": after local update") );
}
else if (om_->isVerbosity( OrthoDetails )) {
CheckList chk;
chk.checkX = true;
chk.checkKX = true;
chk.checkMX = true;
chk.checkR = true;
om_->print( OrthoDetails, accuracyCheck(chk, ": after local update") );
}
} // end while (statusTest == false)
} // end of iterate()
//////////////////////////////////////////////////////////////////////////////////////////////////
// compute/return residual M-norms
template <class ScalarType, class MV, class OP>
std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType>
BlockDavidson<ScalarType,MV,OP>::getResNorms() {
if (Rnorms_current_ == false) {
// Update the residual norms
orthman_->norm(*R_,Rnorms_);
Rnorms_current_ = true;
}
return Rnorms_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// compute/return residual 2-norms
template <class ScalarType, class MV, class OP>
std::vector<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType>
BlockDavidson<ScalarType,MV,OP>::getRes2Norms() {
if (R2norms_current_ == false) {
// Update the residual 2-norms
MVT::MvNorm(*R_,R2norms_);
R2norms_current_ = true;
}
return R2norms_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Set a new StatusTest for the solver.
template <class ScalarType, class MV, class OP>
void BlockDavidson<ScalarType,MV,OP>::setStatusTest(Teuchos::RCP<StatusTest<ScalarType,MV,OP> > test) {
TEUCHOS_TEST_FOR_EXCEPTION(test == Teuchos::null,std::invalid_argument,
"Anasazi::BlockDavidson::setStatusTest() was passed a null StatusTest.");
tester_ = test;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Get the current StatusTest used by the solver.
template <class ScalarType, class MV, class OP>
Teuchos::RCP<StatusTest<ScalarType,MV,OP> > BlockDavidson<ScalarType,MV,OP>::getStatusTest() const {
return tester_;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Check accuracy, orthogonality, and other debugging stuff
//
// bools specify which tests we want to run (instead of running more than we actually care about)
//
// we don't bother checking the following because they are computed explicitly:
// H == Prec*R
// KH == K*H
//
//
// checkV : V orthonormal
// orthogonal to auxvecs
// checkX : X orthonormal
// orthogonal to auxvecs
// checkMX: check MX == M*X
// checkKX: check KX == K*X
// checkH : H orthonormal
// orthogonal to V and H and auxvecs
// checkMH: check MH == M*H
// checkR : check R orthogonal to X
// checkQ : check that auxiliary vectors are actually orthonormal
// checkKK: check that KK is symmetric in memory
//
// TODO:
// add checkTheta
//
template <class ScalarType, class MV, class OP>
std::string BlockDavidson<ScalarType,MV,OP>::accuracyCheck( const CheckList &chk, const std::string &where ) const
{
using std::endl;
std::stringstream os;
os.precision(2);
os.setf(std::ios::scientific, std::ios::floatfield);
os << " Debugging checks: iteration " << iter_ << where << endl;
// V and friends
std::vector<int> lclind(curDim_);
for (int i=0; i<curDim_; ++i) lclind[i] = i;
Teuchos::RCP<const MV> lclV;
if (initialized_) {
lclV = MVT::CloneView(*V_,lclind);
}
if (chk.checkV && initialized_) {
MagnitudeType err = orthman_->orthonormError(*lclV);
os << " >> Error in V^H M V == I : " << err << endl;
for (Array_size_type i=0; i<auxVecs_.size(); ++i) {
err = orthman_->orthogError(*lclV,*auxVecs_[i]);
os << " >> Error in V^H M Q[" << i << "] == 0 : " << err << endl;
}
Teuchos::SerialDenseMatrix<int,ScalarType> curKK(curDim_,curDim_);
Teuchos::RCP<MV> lclKV = MVT::Clone(*V_,curDim_);
OPT::Apply(*Op_,*lclV,*lclKV);
MVT::MvTransMv(ONE,*lclV,*lclKV,curKK);
Teuchos::SerialDenseMatrix<int,ScalarType> subKK(Teuchos::View,*KK_,curDim_,curDim_);
curKK -= subKK;
// dup the lower tri part
for (int j=0; j<curDim_; ++j) {
for (int i=j+1; i<curDim_; ++i) {
curKK(i,j) = curKK(j,i);
}
}
os << " >> Error in V^H K V == KK : " << curKK.normFrobenius() << endl;
}
// X and friends
if (chk.checkX && initialized_) {
MagnitudeType err = orthman_->orthonormError(*X_);
os << " >> Error in X^H M X == I : " << err << endl;
for (Array_size_type i=0; i<auxVecs_.size(); ++i) {
err = orthman_->orthogError(*X_,*auxVecs_[i]);
os << " >> Error in X^H M Q[" << i << "] == 0 : " << err << endl;
}
}
if (chk.checkMX && hasM_ && initialized_) {
MagnitudeType err = Utils::errorEquality(*X_, *MX_, MOp_);
os << " >> Error in MX == M*X : " << err << endl;
}
if (chk.checkKX && initialized_) {
MagnitudeType err = Utils::errorEquality(*X_, *KX_, Op_);
os << " >> Error in KX == K*X : " << err << endl;
}
// H and friends
if (chk.checkH && initialized_) {
MagnitudeType err = orthman_->orthonormError(*H_);
os << " >> Error in H^H M H == I : " << err << endl;
err = orthman_->orthogError(*H_,*lclV);
os << " >> Error in H^H M V == 0 : " << err << endl;
err = orthman_->orthogError(*H_,*X_);
os << " >> Error in H^H M X == 0 : " << err << endl;
for (Array_size_type i=0; i<auxVecs_.size(); ++i) {
err = orthman_->orthogError(*H_,*auxVecs_[i]);
os << " >> Error in H^H M Q[" << i << "] == 0 : " << err << endl;
}
}
if (chk.checkKH && initialized_) {
MagnitudeType err = Utils::errorEquality(*H_, *KH_, Op_);
os << " >> Error in KH == K*H : " << err << endl;
}
if (chk.checkMH && hasM_ && initialized_) {
MagnitudeType err = Utils::errorEquality(*H_, *MH_, MOp_);
os << " >> Error in MH == M*H : " << err << endl;
}
// R: this is not M-orthogonality, but standard Euclidean orthogonality
if (chk.checkR && initialized_) {
Teuchos::SerialDenseMatrix<int,ScalarType> xTx(blockSize_,blockSize_);
MVT::MvTransMv(ONE,*X_,*R_,xTx);
MagnitudeType err = xTx.normFrobenius();
os << " >> Error in X^H R == 0 : " << err << endl;
}
// KK
if (chk.checkKK && initialized_) {
Teuchos::SerialDenseMatrix<int,ScalarType> SDMerr(curDim_,curDim_), lclKK(Teuchos::View,*KK_,curDim_,curDim_);
for (int j=0; j<curDim_; ++j) {
for (int i=0; i<curDim_; ++i) {
SDMerr(i,j) = lclKK(i,j) - SCT::conjugate(lclKK(j,i));
}
}
os << " >> Error in KK - KK^H == 0 : " << SDMerr.normFrobenius() << endl;
}
// Q
if (chk.checkQ) {
for (Array_size_type i=0; i<auxVecs_.size(); ++i) {
MagnitudeType err = orthman_->orthonormError(*auxVecs_[i]);
os << " >> Error in Q[" << i << "]^H M Q[" << i << "] == I : " << err << endl;
for (Array_size_type j=i+1; j<auxVecs_.size(); ++j) {
err = orthman_->orthogError(*auxVecs_[i],*auxVecs_[j]);
os << " >> Error in Q[" << i << "]^H M Q[" << j << "] == 0 : " << err << endl;
}
}
}
os << endl;
return os.str();
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Print the current status of the solver
template <class ScalarType, class MV, class OP>
void
BlockDavidson<ScalarType,MV,OP>::currentStatus(std::ostream &os)
{
using std::endl;
os.setf(std::ios::scientific, std::ios::floatfield);
os.precision(6);
os <<endl;
os <<"================================================================================" << endl;
os << endl;
os <<" BlockDavidson Solver Status" << endl;
os << endl;
os <<"The solver is "<<(initialized_ ? "initialized." : "not initialized.") << endl;
os <<"The number of iterations performed is " <<iter_<<endl;
os <<"The block size is " << blockSize_<<endl;
os <<"The number of blocks is " << numBlocks_<<endl;
os <<"The current basis size is " << curDim_<<endl;
os <<"The number of auxiliary vectors is "<< numAuxVecs_ << endl;
os <<"The number of operations Op*x is "<<count_ApplyOp_<<endl;
os <<"The number of operations M*x is "<<count_ApplyM_<<endl;
os <<"The number of operations Prec*x is "<<count_ApplyPrec_<<endl;
os.setf(std::ios_base::right, std::ios_base::adjustfield);
if (initialized_) {
os << endl;
os <<"CURRENT EIGENVALUE ESTIMATES "<<endl;
os << std::setw(20) << "Eigenvalue"
<< std::setw(20) << "Residual(M)"
<< std::setw(20) << "Residual(2)"
<< endl;
os <<"--------------------------------------------------------------------------------"<<endl;
for (int i=0; i<blockSize_; ++i) {
os << std::setw(20) << theta_[i];
if (Rnorms_current_) os << std::setw(20) << Rnorms_[i];
else os << std::setw(20) << "not current";
if (R2norms_current_) os << std::setw(20) << R2norms_[i];
else os << std::setw(20) << "not current";
os << endl;
}
}
os <<"================================================================================" << endl;
os << endl;
}
} // End of namespace Anasazi
#endif
// End of file AnasaziBlockDavidson.hpp
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