/usr/include/trilinos/AnasaziTraceMinDavidson.hpp is in libtrilinos-anasazi-dev 12.10.1-3.
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// ***********************************************************************
//
// Anasazi: Block Eigensolvers Package
// Copyright (2004) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// This library is free software; you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as
// published by the Free Software Foundation; either version 2.1 of the
// License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful, but
// WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
// USA
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
// @HEADER
/*! \file AnasaziTraceMinDavidson.hpp
\brief Implementation of the TraceMin-Davidson method
*/
#ifndef ANASAZI_TRACEMIN_DAVIDSON_HPP
#define ANASAZI_TRACEMIN_DAVIDSON_HPP
#include "AnasaziConfigDefs.hpp"
#include "AnasaziEigensolver.hpp"
#include "AnasaziMultiVecTraits.hpp"
#include "AnasaziMatOrthoManager.hpp"
#include "AnasaziOperatorTraits.hpp"
#include "AnasaziTraceMinBase.hpp"
#include "Teuchos_ScalarTraits.hpp"
#include "Teuchos_SerialDenseMatrix.hpp"
#include "Teuchos_ParameterList.hpp"
#include "Teuchos_TimeMonitor.hpp"
namespace Anasazi {
namespace Experimental {
/*! \class TraceMinDavidson
\brief This class implements a TraceMin-Davidson iteration for solving
symmetric generalized eigenvalue problems
This method is described in <em>The trace minimization method for the
symmetric generalized eigenvalue problem</em>, A. Sameh and Z. Tong,
Journal of Computational and Applied Mathematics, 123, pp 155-175 (2000)
\ingroup anasazi_solver_framework
\author Alicia Klinvex
*/
template <class ScalarType, class MV, class OP>
class TraceMinDavidson : public TraceMinBase<ScalarType,MV,OP> {
public:
/*! \brief %TraceMinBase constructor with eigenproblem, solver utilities, and parameter list of solver options.
*
* This constructor takes pointers required by the eigensolver, in addition
* to a parameter list of options for the eigensolver. These options include the following (in addition to those
* of TraceMinBase):
* - "Block Size" - an \c int specifying the block size used by the algorithm. This can also be specified using the setBlockSize() method.
* - "Num Blocks" - an \c int specifying the maximum number of blocks allocated for the solver basis.
*/
TraceMinDavidson( const Teuchos::RCP<Eigenproblem<ScalarType,MV,OP> > &problem,
const Teuchos::RCP<SortManager<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> > &sorter,
const Teuchos::RCP<OutputManager<ScalarType> > &printer,
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > &tester,
const Teuchos::RCP<MatOrthoManager<ScalarType,MV,OP> > &ortho,
Teuchos::ParameterList ¶ms
);
private:
//
// Convenience typedefs
//
typedef MultiVecTraits<ScalarType,MV> MVT;
typedef OperatorTraits<ScalarType,MV,OP> OPT;
typedef Teuchos::ScalarTraits<ScalarType> SCT;
typedef typename SCT::magnitudeType MagnitudeType;
// TraceMin specific methods
void addToBasis(const Teuchos::RCP<const MV> Delta);
void harmonicAddToBasis(const Teuchos::RCP<const MV> Delta);
};
//////////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////////
//
// Implementations
//
//////////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////////
// Constructor
template <class ScalarType, class MV, class OP>
TraceMinDavidson<ScalarType,MV,OP>::TraceMinDavidson(
const Teuchos::RCP<Eigenproblem<ScalarType,MV,OP> > &problem,
const Teuchos::RCP<SortManager<typename Teuchos::ScalarTraits<ScalarType>::magnitudeType> > &sorter,
const Teuchos::RCP<OutputManager<ScalarType> > &printer,
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > &tester,
const Teuchos::RCP<MatOrthoManager<ScalarType,MV,OP> > &ortho,
Teuchos::ParameterList ¶ms
) :
TraceMinBase<ScalarType,MV,OP>(problem,sorter,printer,tester,ortho,params)
{
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// 1. Project Delta so that V' M Delta = 0 and Q' M Delta = 0
// 2. Normalize Delta so that Delta' M Delta = I
// 3. Add Delta to the end of V: V = [V Delta]
// 4. Update KV and MV
template <class ScalarType, class MV, class OP>
void TraceMinDavidson<ScalarType,MV,OP>::addToBasis(Teuchos::RCP<const MV> Delta)
{
// TODO: We should also test the row length and map, etc...
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetNumberVecs(*Delta) != this->blockSize_, std::invalid_argument,
"Anasazi::TraceMinDavidson::addToBasis(): Delta does not have blockSize_ columns");
int rank;
// Vector of indices
std::vector<int> curind(this->curDim_), newind(this->blockSize_);
// Pointer to the meaningful parts of V, KV, and MV
Teuchos::RCP<MV> lclV, lclKV, lclMV;
// Holds the vectors we project against
Teuchos::Array< Teuchos::RCP<const MV> > projVecs = this->auxVecs_;
// Get the existing parts of the basis and add them to the list of things we project against
for(int i=0; i<this->curDim_; i++)
curind[i] = i;
lclV = MVT::CloneViewNonConst(*this->V_,curind);
projVecs.push_back(lclV);
// Get the new part of the basis (where we're going to insert Delta)
for (int i=0; i<this->blockSize_; ++i)
newind[i] = this->curDim_ + i;
lclV = MVT::CloneViewNonConst(*this->V_,newind);
// Insert Delta at the end of V
MVT::SetBlock(*Delta,newind,*this->V_);
this->curDim_ += this->blockSize_;
// Project out the components of Delta in the direction of V
if(this->hasM_)
{
// It is more efficient to provide the orthomanager with MV
Teuchos::Array< Teuchos::RCP<const MV> > MprojVecs = this->MauxVecs_;
lclMV = MVT::CloneViewNonConst(*this->MV_,curind);
MprojVecs.push_back(lclMV);
// Compute M*Delta
lclMV = MVT::CloneViewNonConst(*this->MV_,newind);
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *this->timerMOp_ );
#endif
this->count_ApplyM_+= this->blockSize_;
OPT::Apply(*this->MOp_,*lclV,*lclMV);
}
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *this->timerOrtho_ );
#endif
// Project and normalize Delta
rank = this->orthman_->projectAndNormalizeMat(*lclV,projVecs,
Teuchos::tuple(Teuchos::RCP< Teuchos::SerialDenseMatrix< int, ScalarType > >(Teuchos::null)),
Teuchos::null,lclMV,MprojVecs);
}
MprojVecs.pop_back();
}
else
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *this->timerOrtho_ );
#endif
// Project and normalize Delta
rank = this->orthman_->projectAndNormalizeMat(*lclV,projVecs);
}
projVecs.pop_back();
TEUCHOS_TEST_FOR_EXCEPTION(rank != this->blockSize_,TraceMinBaseOrthoFailure,
"Anasazi::TraceMinDavidson::addToBasis(): Couldn't generate basis of full rank.");
// Update KV
if(this->Op_ != Teuchos::null)
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *this->timerOp_ );
#endif
this->count_ApplyOp_+= this->blockSize_;
lclKV = MVT::CloneViewNonConst(*this->KV_,newind);
OPT::Apply(*this->Op_,*lclV,*lclKV);
}
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// 1. Project Delta so that V' M Delta = 0 and Q' M Delta = 0
// 2. Normalize Delta so that Delta' M Delta = I
// 3. Add Delta to the end of V: V = [V Delta]
// 4. Update KV and MV
template <class ScalarType, class MV, class OP>
void TraceMinDavidson<ScalarType,MV,OP>::harmonicAddToBasis(Teuchos::RCP<const MV> Delta)
{
// TODO: We should also test the row length and map, etc...
TEUCHOS_TEST_FOR_EXCEPTION(MVT::GetNumberVecs(*Delta) != this->blockSize_, std::invalid_argument,
"Anasazi::TraceMinDavidson::addToBasis(): Delta does not have blockSize_ columns");
int rank;
// Vector of indices
std::vector<int> curind(this->curDim_), newind(this->blockSize_);
// Pointer to the meaningful parts of V, KV, and MV
Teuchos::RCP<MV> lclV, lclKV, lclMV, projVecs, KprojVecs;
// Array of things we project against
// Get the existing parts of the basis and add them to the list of things we project against
for(int i=0; i<this->curDim_; i++)
curind[i] = i;
projVecs = MVT::CloneViewNonConst(*this->V_,curind);
if(this->Op_ != Teuchos::null)
{
lclKV = MVT::CloneViewNonConst(*this->KV_,curind);
KprojVecs = lclKV;
}
// Get the new part of the basis (where we're going to insert Delta)
for (int i=0; i<this->blockSize_; ++i)
newind[i] = this->curDim_ + i;
lclV = MVT::CloneViewNonConst(*this->V_,newind);
// Insert Delta at the end of V
MVT::SetBlock(*Delta,newind,*this->V_);
this->curDim_ += this->blockSize_;
// Project the auxVecs out of Delta
if(this->auxVecs_.size() > 0)
this->orthman_->projectMat(*lclV,this->auxVecs_);
// Update KV
if(this->Op_ != Teuchos::null)
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *this->timerOp_ );
#endif
this->count_ApplyOp_+= this->blockSize_;
lclKV = MVT::CloneViewNonConst(*this->KV_,newind);
OPT::Apply(*this->Op_,*lclV,*lclKV);
}
// Project out the components of Delta in the direction of V
// gamma = KauxVecs' lclKV
int nauxVecs = MVT::GetNumberVecs(*projVecs);
RCP< Teuchos::SerialDenseMatrix<int,ScalarType> > gamma = rcp(new Teuchos::SerialDenseMatrix<int,ScalarType>(nauxVecs,this->blockSize_));
this->orthman_->innerProdMat(*KprojVecs,*lclKV,*gamma);
// lclKV = lclKV - KauxVecs gamma
MVT::MvTimesMatAddMv(-this->ONE,*KprojVecs,*gamma,this->ONE,*lclKV);
// lclV = lclV - auxVecs gamma
MVT::MvTimesMatAddMv(-this->ONE,*projVecs,*gamma,this->ONE,*lclV);
// Normalize lclKV
RCP< Teuchos::SerialDenseMatrix<int,ScalarType> > gamma2 = rcp(new Teuchos::SerialDenseMatrix<int,ScalarType>(this->blockSize_,this->blockSize_));
rank = this->orthman_->normalizeMat(*lclKV,gamma2);
// lclV = lclV/gamma
Teuchos::SerialDenseSolver<int,ScalarType> SDsolver;
SDsolver.setMatrix(gamma2);
SDsolver.invert();
RCP<MV> tempMV = MVT::CloneCopy(*lclV);
MVT::MvTimesMatAddMv(this->ONE,*tempMV,*gamma2,this->ZERO,*lclV);
TEUCHOS_TEST_FOR_EXCEPTION(rank != this->blockSize_,TraceMinBaseOrthoFailure,
"Anasazi::TraceMinDavidson::addToBasis(): Couldn't generate basis of full rank.");
// Update MV
if(this->hasM_)
{
#ifdef ANASAZI_TEUCHOS_TIME_MONITOR
Teuchos::TimeMonitor lcltimer( *this->timerMOp_ );
#endif
this->count_ApplyM_+= this->blockSize_;
lclMV = MVT::CloneViewNonConst(*this->MV_,newind);
OPT::Apply(*this->MOp_,*lclV,*lclMV);
}
}
}} // End of namespace Anasazi
#endif
// End of file AnasaziTraceMinDavidson.hpp
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