/usr/include/trilinos/Ifpack2_Krylov_def.hpp is in libtrilinos-ifpack2-dev 12.10.1-3.
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// ***********************************************************************
//
// Ifpack2: Tempated Object-Oriented Algebraic Preconditioner Package
// Copyright (2009) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
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// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
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//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
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*/
#ifndef IFPACK2_KRYLOV_DEF_HPP
#define IFPACK2_KRYLOV_DEF_HPP
#ifdef HAVE_IFPACK2_DEPRECATED_CODE
#include "Ifpack2_Chebyshev.hpp"
#include "Ifpack2_Heap.hpp"
#include "Ifpack2_ILUT.hpp"
#include "Ifpack2_Parameters.hpp"
#include "Ifpack2_Relaxation.hpp"
#include "Ifpack2_RILUK.hpp"
#include "BelosBlockGmresSolMgr.hpp"
#include "BelosBlockCGSolMgr.hpp"
#include "Teuchos_Assert.hpp"
#include "Teuchos_Time.hpp"
#include <iostream>
#include <sstream>
#include <cmath>
namespace Ifpack2 {
namespace DeprecatedAndMayDisappearAtAnyTime {
template <class MatrixType>
Krylov<MatrixType>::
Krylov (const Teuchos::RCP<const row_matrix_type>& A) :
A_ (A),
// Default values
iterationType_ ("GMRES"),
numIters_ (5),
resTol_ (0.001), // FIXME (mfh 17 Jan 2014) Make a function of STS::eps()
BlockSize_ (1),
ZeroStartingSolution_ (true),
PreconditionerType_ (1),
// General
IsInitialized_ (false),
IsComputed_ (false),
NumInitialize_ (0),
NumCompute_ (0),
NumApply_ (0),
InitializeTime_ (0.0),
ComputeTime_ (0.0),
ApplyTime_ (0.0)
{}
template <class MatrixType>
Krylov<MatrixType>::~Krylov() {}
template <class MatrixType>
void Krylov<MatrixType>::setMatrix (const Teuchos::RCP<const row_matrix_type>& A)
{
// Check in serial or one-process mode if the matrix is square.
TEUCHOS_TEST_FOR_EXCEPTION(
! A.is_null () && A->getComm ()->getSize () == 1 &&
A->getNodeNumRows () != A->getNodeNumCols (),
std::runtime_error, "Ifpack2::Krylov::setMatrix: If A's communicator only "
"contains one process, then A must be square. Instead, you provided a "
"matrix A with " << A->getNodeNumRows () << " rows and "
<< A->getNodeNumCols () << " columns.");
// It's legal for A to be null; in that case, you may not call
// initialize() until calling setMatrix() with a nonnull input.
// Regardless, setting the matrix invalidates any previous
// factorization.
IsInitialized_ = false;
IsComputed_ = false;
A_ = A;
}
template <class MatrixType>
void Krylov<MatrixType>::setParameters (const Teuchos::ParameterList& plist)
{
using Teuchos::as;
using Teuchos::ParameterList;
using Teuchos::Exceptions::InvalidParameterName;
using Teuchos::Exceptions::InvalidParameterType;
// FIXME (mfh 12 Sep 2014) Don't rewrite Belos::SolverFactory!!! Use
// that instead.
ParameterList params = plist;
// Get the current parameters' values. We don't assign to the
// instance data directly until we've gotten all the parameters.
// This ensures "transactional" semantics, so that if attempting to
// get some parameter throws an exception, the class' state doesn't
// change.
magnitude_type resTol = resTol_;
int numIters = numIters_;
std::string iterType = iterationType_;
int blockSize = BlockSize_;
bool zeroStartingSolution = ZeroStartingSolution_;
int precType = PreconditionerType_;
//
// Get the "krylov: iteration type" parameter.
//
// We prefer std::string (name of Belos solver), but allow int
// ("enum" value) for backwards compatibility.
//
bool gotIterType = false;
try {
iterType = params.get<std::string> ("krylov: iteration type");
gotIterType = true;
}
catch (InvalidParameterName) {
gotIterType = true; // the parameter is not there, so don't try to get it anymore
}
catch (InvalidParameterType) {
// Perhaps the user specified it as int.
}
// If it's not string, it has to be int.
// We've already checked whether the name exists.
if (! gotIterType) {
const int iterTypeInt = params.get<int> ("krylov: iteration type");
gotIterType = true;
if (iterTypeInt == 1) {
iterType = "GMRES";
} else if (iterTypeInt == 2) {
iterType = "CG";
} else {
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::invalid_argument, "Ifpack2::Krylov::setParameters: Invalid "
"\"krylov: iteration type\" value " << iterTypeInt << ". Valid int "
"values are 1 (GMRES) and 2 (CG). Please prefer setting this "
"parameter as a string (the name of the Krylov solver to use).");
}
}
resTol = params.get ("krylov: residual tolerance", resTol);
numIters = params.get ("krylov: number of iterations", numIters);
blockSize = params.get ("krylov: block size", blockSize);
zeroStartingSolution = params.get ("krylov: zero starting solution",
zeroStartingSolution);
precType = params.get ("krylov: preconditioner type", precType);
// Separate preconditioner parameters into another list
//
// FIXME (mfh 17 Jan 2014) Inner preconditioner's parameters should
// be a sublist, not part of the main list!!!
if (PreconditionerType_ == 1) {
precParams_.set ("relaxation: sweeps",
params.get ("relaxation: sweeps", 1));
precParams_.set ("relaxation: damping factor",
params.get ("relaxation: damping factor", (scalar_type) 1.0));
precParams_.set ("relaxation: min diagonal value",
params.get ("relaxation: min diagonal value", STS::one ()));
precParams_.set ("relaxation: zero starting solution",
params.get ("relaxation: zero starting solution", true));
precParams_.set ("relaxation: backward mode",
params.get ("relaxation: backward mode", false));
}
// FIXME (mfh 17 Jan 2014) AdditiveSchwarz's ParameterList no longer
// takes parameters for its subdomain solver! You have to pass them
// into a sublist.
if (PreconditionerType_ == 2 || PreconditionerType_ == 3) {
// FIXME (mfh 17 Jan 2014) should be an integer, given how ILUT
// works! Furthermore, this parameter does not mean what you
// think it means.
precParams_.set ("fact: ilut level-of-fill",
params.get ("fact: ilut level-of-fill", (double) 1.0));
precParams_.set ("fact: iluk level-of-fill",
params.get ("fact: iluk level-of-fill", (double) 1.0));
// FIXME (mfh 17 Jan 2014) scalar_type or magnitude_type? not
// sure, but double is definitely wrong.
precParams_.set ("fact: absolute threshold",
params.get ("fact: absolute threshold", (double) 0.0));
// FIXME (mfh 17 Jan 2014) scalar_type or magnitude_type? not
// sure, but double is definitely wrong.
precParams_.set ("fact: relative threshold",
params.get("fact: relative threshold", (double) 1.0));
// FIXME (mfh 17 Jan 2014) scalar_type or magnitude_type? not
// sure, but double is definitely wrong.
precParams_.set ("fact: relax value",
params.get ("fact: relax value", (double) 0.0));
}
// "Commit" the new values to the instance data.
iterationType_ = iterType;
numIters_ = numIters;
resTol_ = resTol;
BlockSize_ = blockSize;
ZeroStartingSolution_ = zeroStartingSolution;
PreconditionerType_ = precType;
}
template <class MatrixType>
Teuchos::RCP<const Teuchos::Comm<int> >
Krylov<MatrixType>::getComm () const {
TEUCHOS_TEST_FOR_EXCEPTION(
A_.is_null (), std::runtime_error, "Ifpack2::Krylov::getComm: "
"The input matrix A is null. Please call setMatrix() with a nonnull "
"input matrix before calling this method.");
return A_->getComm ();
}
template <class MatrixType>
Teuchos::RCP<const Tpetra::RowMatrix<typename MatrixType::scalar_type,typename MatrixType::local_ordinal_type,typename MatrixType::global_ordinal_type,typename MatrixType::node_type> >
Krylov<MatrixType>::getMatrix () const {
return A_;
}
template <class MatrixType>
Teuchos::RCP<const Tpetra::Map<typename MatrixType::local_ordinal_type,typename MatrixType::global_ordinal_type,typename MatrixType::node_type> >
Krylov<MatrixType>::getDomainMap () const
{
TEUCHOS_TEST_FOR_EXCEPTION(
A_.is_null (), std::runtime_error, "Ifpack2::Krylov::getDomainMap: "
"The input matrix A is null. Please call setMatrix() with a nonnull "
"input matrix before calling this method.");
return A_->getDomainMap ();
}
template <class MatrixType>
Teuchos::RCP<const Tpetra::Map<typename MatrixType::local_ordinal_type,typename MatrixType::global_ordinal_type,typename MatrixType::node_type> >
Krylov<MatrixType>::getRangeMap () const
{
TEUCHOS_TEST_FOR_EXCEPTION(
A_.is_null (), std::runtime_error, "Ifpack2::Krylov::getRangeMap: "
"The input matrix A is null. Please call setMatrix() with a nonnull "
"input matrix before calling this method.");
return A_->getRangeMap ();
}
template <class MatrixType>
bool Krylov<MatrixType>::hasTransposeApply () const {
// FIXME (mfh 17 Jan 2014) apply() does not currently work with mode
// != NO_TRANS, so it's correct to return false here.
return false;
}
template <class MatrixType>
int Krylov<MatrixType>::getNumInitialize () const {
return NumInitialize_;
}
template <class MatrixType>
int Krylov<MatrixType>::getNumCompute () const {
return NumCompute_;
}
template <class MatrixType>
int Krylov<MatrixType>::getNumApply () const {
return NumApply_;
}
template <class MatrixType>
double Krylov<MatrixType>::getInitializeTime () const {
return InitializeTime_;
}
template <class MatrixType>
double Krylov<MatrixType>::getComputeTime () const {
return ComputeTime_;
}
template <class MatrixType>
double Krylov<MatrixType>::getApplyTime () const {
return ApplyTime_;
}
template <class MatrixType>
void Krylov<MatrixType>::initialize ()
{
using Teuchos::ParameterList;
using Teuchos::RCP;
using Teuchos::rcp;
typedef Tpetra::MultiVector<scalar_type, local_ordinal_type,
global_ordinal_type, node_type> TMV;
typedef Tpetra::Operator<scalar_type, local_ordinal_type,
global_ordinal_type, node_type> TOP;
TEUCHOS_TEST_FOR_EXCEPTION(
A_.is_null (), std::runtime_error, "Ifpack2::Krylov::initialize: "
"The input matrix A is null. Please call setMatrix() with a nonnull "
"input matrix before calling this method.");
// clear any previous allocation
IsInitialized_ = false;
IsComputed_ = false;
Teuchos::Time timer ("initialize");
{ // The body of code to time
Teuchos::TimeMonitor timeMon (timer);
// Belos parameter list
RCP<ParameterList> belosList = rcp (new ParameterList ("GMRES"));
belosList->set ("Maximum Iterations", numIters_);
belosList->set ("Convergence Tolerance", resTol_);
// FIXME (17 Jan 2014) This whole "preconditioner type" thing is
// not how we want Krylov to initialize its inner preconditioner.
// Krylov should be initialized like AdditiveSchwarz: the Factory
// should create it, in order to avoid circular dependencies.
if (PreconditionerType_ == 0) {
// no preconditioner
}
else if (PreconditionerType_==1) {
ifpack2_prec_=rcp (new Relaxation<row_matrix_type> (A_));
}
else if (PreconditionerType_==2) {
ifpack2_prec_=rcp (new ILUT<row_matrix_type> (A_));
}
else if (PreconditionerType_==3) {
ifpack2_prec_ = rcp (new RILUK<row_matrix_type> (A_));
}
else if (PreconditionerType_==4) {
ifpack2_prec_ = rcp (new Chebyshev<row_matrix_type> (A_));
}
if (PreconditionerType_>0) {
ifpack2_prec_->initialize();
ifpack2_prec_->setParameters(precParams_);
}
belosProblem_ = rcp (new Belos::LinearProblem<belos_scalar_type,TMV,TOP> ());
belosProblem_->setOperator (A_);
if (iterationType_ == "GMRES") {
belosSolver_ =
rcp (new Belos::BlockGmresSolMgr<belos_scalar_type,TMV,TOP> (belosProblem_, belosList));
}
else {
belosSolver_ =
rcp (new Belos::BlockCGSolMgr<belos_scalar_type,TMV,TOP> (belosProblem_, belosList));
}
}
IsInitialized_ = true;
++NumInitialize_;
InitializeTime_ += timer.totalElapsedTime ();
}
template <class MatrixType>
void Krylov<MatrixType>::compute ()
{
TEUCHOS_TEST_FOR_EXCEPTION(
A_.is_null (), std::runtime_error, "Ifpack2::Krylov::compute: "
"The input matrix A is null. Please call setMatrix() with a nonnull "
"input matrix before calling this method.");
// Don't time the initialize(); that gets timed separately.
if (! isInitialized ()) {
initialize ();
}
Teuchos::Time timer ("compute");
{ // The body of code to time
Teuchos::TimeMonitor timeMon (timer);
if (PreconditionerType_ > 0) {
ifpack2_prec_->compute ();
belosProblem_->setLeftPrec (ifpack2_prec_);
}
}
IsComputed_ = true;
++NumCompute_;
ComputeTime_ += timer.totalElapsedTime ();
}
template <class MatrixType>
void Krylov<MatrixType>::
apply (const Tpetra::MultiVector<typename MatrixType::scalar_type,
typename MatrixType::local_ordinal_type,
typename MatrixType::global_ordinal_type,
typename MatrixType::node_type>& X,
Tpetra::MultiVector<typename MatrixType::scalar_type,
typename MatrixType::local_ordinal_type,
typename MatrixType::global_ordinal_type,
typename MatrixType::node_type>& Y,
Teuchos::ETransp mode,
typename MatrixType::scalar_type alpha,
typename MatrixType::scalar_type beta) const
{
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcpFromRef;
typedef Tpetra::MultiVector<scalar_type, local_ordinal_type,
global_ordinal_type, node_type> MV;
TEUCHOS_TEST_FOR_EXCEPTION(
! isComputed (), std::runtime_error,
"Ifpack2::Krylov::apply: You must call compute() before you may call apply().");
TEUCHOS_TEST_FOR_EXCEPTION(
X.getNumVectors () != Y.getNumVectors (), std::invalid_argument,
"Ifpack2::Krylov::apply: The MultiVector inputs X and Y do not have the "
"same number of columns. X.getNumVectors() = " << X.getNumVectors ()
<< " != Y.getNumVectors() = " << Y.getNumVectors () << ".");
// Catch unimplemented cases: alpha != 1, beta != 0, mode != NO_TRANS.
TEUCHOS_TEST_FOR_EXCEPTION(
alpha != STS::one (), std::logic_error,
"Ifpack2::Krylov::apply: alpha != 1 has not been implemented.");
TEUCHOS_TEST_FOR_EXCEPTION(
beta != STS::zero (), std::logic_error,
"Ifpack2::Krylov::apply: zero != 0 has not been implemented.");
TEUCHOS_TEST_FOR_EXCEPTION(
mode != Teuchos::NO_TRANS, std::logic_error,
"Ifpack2::Krylov::apply: mode != Teuchos::NO_TRANS has not been implemented.");
Teuchos::Time timer ("apply");
{ // The body of code to time
Teuchos::TimeMonitor timeMon (timer);
// If X and Y are pointing to the same memory location,
// we need to create an auxiliary vector, Xcopy
RCP<const MV> Xcopy;
{
auto X_lcl_host = X.template getLocalView<Kokkos::HostSpace> ();
auto Y_lcl_host = Y.template getLocalView<Kokkos::HostSpace> ();
if (X_lcl_host.ptr_on_device () == Y_lcl_host.ptr_on_device ()) {
Xcopy = rcp (new MV (X, Teuchos::Copy));
} else {
Xcopy = rcpFromRef (X);
}
}
RCP<MV> Ycopy = rcpFromRef (Y);
if (ZeroStartingSolution_) {
Ycopy->putScalar (STS::zero ());
}
// Set left and right hand sides for Belos
belosProblem_->setProblem (Ycopy, Xcopy);
belosSolver_->solve (); // solve the linear system
}
++NumApply_;
ApplyTime_ += timer.totalElapsedTime ();
}
template <class MatrixType>
std::string Krylov<MatrixType>::description () const
{
std::ostringstream os;
// Output is a valid YAML dictionary in flow style. If you don't
// like everything on a single line, you should call describe()
// instead.
os << "\"Ifpack2::Krylov\": {";
if (this->getObjectLabel () != "") {
os << "Label: \"" << this->getObjectLabel () << "\", ";
}
os << "Initialized: " << (isInitialized () ? "true" : "false") << ", "
<< "Computed: " << (isComputed () ? "true" : "false") << ", ";
if (A_.is_null ()) {
os << "Matrix: null";
}
else {
os << "Matrix: not null"
<< ", Global matrix dimensions: ["
<< A_->getGlobalNumRows () << ", " << A_->getGlobalNumCols () << "]";
}
os << "}";
return os.str ();
}
template <class MatrixType>
void Krylov<MatrixType>::
describe (Teuchos::FancyOStream &out,
const Teuchos::EVerbosityLevel verbLevel) const
{
using std::endl;
using std::setw;
using Teuchos::VERB_DEFAULT;
using Teuchos::VERB_NONE;
using Teuchos::VERB_LOW;
using Teuchos::VERB_MEDIUM;
using Teuchos::VERB_HIGH;
using Teuchos::VERB_EXTREME;
const Teuchos::EVerbosityLevel vl =
(verbLevel == VERB_DEFAULT) ? VERB_LOW : verbLevel;
if (vl != VERB_NONE) {
// describe() always starts with a tab by convention.
Teuchos::OSTab tab0 (out);
out << "\"Ifpack2::Krylov\":";
Teuchos::OSTab tab1 (out);
if (this->getObjectLabel () != "") {
out << "Label: " << this->getObjectLabel () << endl;
}
out << "Initialized: " << (isInitialized () ? "true" : "false") << endl
<< "Computed: " << (isComputed () ? "true" : "false") << endl
<< "Global number of rows: " << A_->getGlobalNumRows () << endl
<< "Global number of columns: " << A_->getGlobalNumCols () << endl
<< "Matrix:";
if (A_.is_null ()) {
out << " null" << endl;
} else {
A_->describe (out, vl);
}
}
}
} // namespace DeprecatedAndMayDisappearAtAnyTime
} // namespace Ifpack2
// There's no need to instantiate for CrsMatrix too. All Ifpack2
// preconditioners can and should do dynamic casts if they need a type
// more specific than RowMatrix.
//
// In fact, Krylov really doesn't _need_ the RowMatrix methods; it
// could very well just rely on the Operator interface. initialize()
// need only check whether the domain and range Maps have changed
// (which would necessitate reinitializing the Krylov solver).
#define IFPACK2_KRYLOV_INSTANT(S,LO,GO,N) \
template class Ifpack2::DeprecatedAndMayDisappearAtAnyTime::Krylov< Tpetra::RowMatrix<S, LO, GO, N> >;
#endif // HAVE_IFPACK2_DEPRECATED_CODE
#endif /* IFPACK2_KRYLOV_DEF_HPP */
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