/usr/include/trilinos/Stokhos_KLReducedMatrixFreeOperator.hpp is in libtrilinos-stokhos-dev 12.10.1-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 | // $Id: Stokhos_MatrixFreeEpetraOp.hpp,v 1.7 2009/09/14 18:35:48 etphipp Exp $
// $Source: /space/CVS/Trilinos/packages/stokhos/src/Stokhos_MatrixFreeEpetraOp.hpp,v $
// @HEADER
// ***********************************************************************
//
// Stokhos Package
// Copyright (2009) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Eric T. Phipps (etphipp@sandia.gov).
//
// ***********************************************************************
// @HEADER
#ifndef STOKHOS_KL_REDUCED_MATRIX_FREE_OPERATOR_HPP
#define STOKHOS_KL_REDUCED_MATRIX_FREE_OPERATOR_HPP
#include "Stokhos_SGOperator.hpp"
#include "EpetraExt_MultiComm.h"
#include "Stokhos_OrthogPolyBasis.hpp"
#include "Stokhos_EpetraSparse3Tensor.hpp"
#include "Epetra_Map.h"
#include "Teuchos_ParameterList.hpp"
#include "Teuchos_Array.hpp"
#include "Epetra_MultiVector.h"
#include "Stokhos_VectorOrthogPoly.hpp"
#include "Stokhos_VectorOrthogPolyTraitsEpetra.hpp"
#include "Stokhos_EpetraVectorOrthogPoly.hpp"
#include "Stokhos_MatrixFreeOperator.hpp"
namespace Stokhos {
/*!
* \brief An Epetra operator representing the block stochastic Galerkin
* operator.
*/
class KLReducedMatrixFreeOperator : public Stokhos::SGOperator {
public:
//! Constructor
KLReducedMatrixFreeOperator(
const Teuchos::RCP<const EpetraExt::MultiComm>& sg_comm,
const Teuchos::RCP<const Stokhos::OrthogPolyBasis<int,double> >& sg_basis,
const Teuchos::RCP<const Stokhos::EpetraSparse3Tensor>& epetraCijk,
const Teuchos::RCP<const Epetra_Map>& domain_base_map,
const Teuchos::RCP<const Epetra_Map>& range_base_map,
const Teuchos::RCP<const Epetra_Map>& domain_sg_map,
const Teuchos::RCP<const Epetra_Map>& range_sg_map,
const Teuchos::RCP<Teuchos::ParameterList>& params);
//! Destructor
virtual ~KLReducedMatrixFreeOperator();
/** \name Stokhos::SGOperator methods */
//@{
//! Setup operator
virtual void setupOperator(
const Teuchos::RCP<Stokhos::EpetraOperatorOrthogPoly >& poly);
//! Get SG polynomial
virtual Teuchos::RCP< Stokhos::EpetraOperatorOrthogPoly >
getSGPolynomial();
//! Get SG polynomial
virtual Teuchos::RCP<const Stokhos::EpetraOperatorOrthogPoly >
getSGPolynomial() const;
//@}
/** \name Epetra_Operator methods */
//@{
//! Set to true if the transpose of the operator is requested
virtual int SetUseTranspose(bool UseTranspose);
/*!
* \brief Returns the result of a Epetra_Operator applied to a
* Epetra_MultiVector Input in Result as described above.
*/
virtual int Apply(const Epetra_MultiVector& Input,
Epetra_MultiVector& Result) const;
/*!
* \brief Returns the result of the inverse of the operator applied to a
* Epetra_MultiVector Input in Result as described above.
*/
virtual int ApplyInverse(const Epetra_MultiVector& X,
Epetra_MultiVector& Y) const;
//! Returns an approximate infinity norm of the operator matrix.
virtual double NormInf() const;
//! Returns a character string describing the operator
virtual const char* Label () const;
//! Returns the current UseTranspose setting.
virtual bool UseTranspose() const;
/*!
* \brief Returns true if the \e this object can provide an
* approximate Inf-norm, false otherwise.
*/
virtual bool HasNormInf() const;
/*!
* \brief Returns a reference to the Epetra_Comm communicator
* associated with this operator.
*/
virtual const Epetra_Comm & Comm() const;
/*!
* \brief Returns the Epetra_Map object associated with the
* domain of this matrix operator.
*/
virtual const Epetra_Map& OperatorDomainMap () const;
/*!
* \brief Returns the Epetra_Map object associated with the
* range of this matrix operator.
*/
virtual const Epetra_Map& OperatorRangeMap () const;
//@}
protected:
//! Setup KL blocks
void setup();
private:
//! Private to prohibit copying
KLReducedMatrixFreeOperator(const KLReducedMatrixFreeOperator&);
//! Private to prohibit copying
KLReducedMatrixFreeOperator& operator=(const KLReducedMatrixFreeOperator&);
protected:
//! Label for operator
std::string label;
//! Stores SG parallel communicator
Teuchos::RCP<const EpetraExt::MultiComm> sg_comm;
//! Stochastic Galerking basis
Teuchos::RCP<const Stokhos::OrthogPolyBasis<int,double> > sg_basis;
//! Stores Epetra Cijk tensor
Teuchos::RCP<const Stokhos::EpetraSparse3Tensor> epetraCijk;
//! Stores domain base map
Teuchos::RCP<const Epetra_Map> domain_base_map;
//! Stores range base map
Teuchos::RCP<const Epetra_Map> range_base_map;
//! Stores domain SG map
Teuchos::RCP<const Epetra_Map> domain_sg_map;
//! Stores range SG map
Teuchos::RCP<const Epetra_Map> range_sg_map;
//! Short-hand for Cijk
typedef Stokhos::Sparse3Tensor<int,double> Cijk_type;
//! Stores triple product tensor
Teuchos::RCP<const Cijk_type> Cijk;
//! Stores operators
Teuchos::RCP<Stokhos::EpetraOperatorOrthogPoly > block_ops;
//! Algorithmic parameters
Teuchos::RCP<Teuchos::ParameterList> params;
//! Flag indicating whether transpose was selected
bool useTranspose;
//! Number of terms in expansion
int expansion_size;
//! Number of blocks
int num_blocks;
//! Number of KL terms
int num_KL;
//! Number of computed KL terms
int num_KL_computed;
//! Mean block
Teuchos::RCP<Epetra_CrsMatrix> mean;
//! Block map for vectorized-matrices
Teuchos::RCP<Epetra_Map> block_vec_map;
//! Polynomial sorting vectorized matrix coefficients
Teuchos::RCP< Stokhos::EpetraVectorOrthogPoly> block_vec_poly;
//! Dot products of KL eigenvectors and Jacobian blocks
Teuchos::Array< Teuchos::Array<double> > dot_products;
//! Sparse KL coefficients
Teuchos::RCP< Stokhos::Sparse3Tensor<int,double> > sparse_kl_coeffs;
//! KL blocks
Teuchos::Array< Teuchos::RCP<Epetra_CrsMatrix> > kl_blocks;
//! KL blocks as operators
Teuchos::RCP< Stokhos::EpetraOperatorOrthogPoly > kl_ops;
//! Matrix-Free operator using KL operators
Teuchos::RCP< Stokhos::MatrixFreeOperator > kl_mat_free_op;
//! Tolerance for dropping entries in sparse 3 tensor
double drop_tolerance;
//! Whether to do KL error tests (can be expensive)
bool do_error_tests;
}; // class KLReducedMatrixFreeOperator
} // namespace Stokhos
#endif // STOKHOS_KL_REDUCED_MATRIX_FREE_OPERATOR_HPP
|