/usr/include/trilinos/Tpetra_CrsMatrixMultiplyOp.hpp is in libtrilinos-tpetra-dev 12.10.1-3.
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// Tpetra: Templated Linear Algebra Services Package
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#ifndef TPETRA_CRSMATRIXMULTIPLYOP_HPP
#define TPETRA_CRSMATRIXMULTIPLYOP_HPP
/// \file Tpetra_CrsMatrixMultiplyOp.hpp
///
/// Declaration and definition of Tpetra::CrsMatrixMultiplyOp and its
/// nonmember constructor Tpetra::createCrsMatrixMultiplyOp.
#include <Tpetra_CrsMatrix.hpp>
#include <Tpetra_Util.hpp>
#include <Teuchos_TimeMonitor.hpp>
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
# include "Teuchos_VerboseObject.hpp"
#endif
namespace Tpetra {
/// \brief A class for wrapping a CrsMatrix multiply in a Operator.
///
/// \note Most Tpetra users do not need to use this class. It will
/// be useful to Tpetra users who want to do mixed-precision
/// sparse matrix-vector multiply, where the sparse matrix's
/// entries have a different precision than that of the input and
/// output vectors. If your sparse matrix and vectors have the
/// same type of entries, then you don't need to use this class.
///
/// This class makes a <tt>CrsMatrix<MatScalar, ...></tt> "look
/// like" an <tt>Operator<Scalar, ...></tt>, where
/// <tt>MatScalar</tt> and <tt>Scalar</tt> may be different types.
/// It does so by working around a limitation of C++, namely that
/// template methods of a class can't be virtual.
///
/// Here is a detailed description of how the language issue relates
/// to CrsMatrix. If you call the <tt>apply</tt> method of
/// CrsMatrix, you will always get the version that takes a
/// <tt>MultiVector<Scalar, ...></tt> input and produces a
/// <tt>MultiVector<Scalar, ...></tt> output. CrsMatrix actually
/// implements a a templated sparse matrix-vector multiply operation
/// (its <tt>localMultiply</tt> method). It is templated on the
/// scalar types of its input and output multivectors
/// (<tt>DomainScalar</tt> resp. <tt>RangeScalar</tt>). However,
/// Operator can't access this templated mat-vec method. This is
/// because Operator::apply is virtual, and therefore cannot have a
/// template parameter for the <tt>Scalar</tt> type of the
/// MultiVector input and output.
///
/// Users who want to access the templated sparse mat-vec in
/// CrsMatrix through the Operator interface may wrap the CrsMatrix
/// in an instance of this class. This class implements an Operator
/// that takes <tt>MultiVector<Scalar, ...></tt> input and output,
/// but the CrsMatrix may contain any desired type
/// <tt>MatScalar</tt>. The type <tt>MatScalar</tt> may differ from
/// the <tt>Scalar</tt> type of the MultiVector input and output.
/// That works around the "no virtual template methods" issue for
/// input and output multivectors of the same type.
///
/// Interestingly enough, CrsMatrix implements its <tt>apply</tt>
/// method using an instance of this class with <tt>Scalar ==
/// MatScalar</tt>. CrsMatrix does not actually contain an
/// implementation of "nonlocal" (distributed over multiple MPI
/// processes) mat-vec; its <tt>apply</tt> defers the nonlocal part
/// to this class' apply() method. The same is true for the
/// gaussSeidel() method.
///
/// \tparam Scalar The type of the entries of the input and output
/// MultiVector of the apply() method. Same as the first template
/// parameter of Operator.
///
/// \tparam MatScalar The type of the entries of the CrsMatrix; the
/// first template parameter of CrsMatrix.
///
/// \tparam LocalOrdinal The type of the local indices of the
/// CrsMatrix; the second template parameter of CrsMatrix and
/// Operator.
///
/// \tparam GlobalOrdinal The type of the global indices of the
/// CrsMatrix; the third template parameter of CrsMatrix and
/// Operator.
///
/// \tparam Node The fourth template parameter of CrsMatrix and
/// Operator.
template <class Scalar,
class MatScalar = Scalar,
class LocalOrdinal = ::Tpetra::Details::DefaultTypes::local_ordinal_type,
class GlobalOrdinal = ::Tpetra::Details::DefaultTypes::global_ordinal_type,
class Node = ::Tpetra::Details::DefaultTypes::node_type>
class CrsMatrixMultiplyOp :
public Operator<Scalar, LocalOrdinal, GlobalOrdinal, Node>
{
public:
//! The specialization of CrsMatrix which this class wraps.
typedef CrsMatrix<MatScalar, LocalOrdinal, GlobalOrdinal, Node> crs_matrix_type;
//! The specialization of Map which this class uses.
typedef Map<LocalOrdinal, GlobalOrdinal, Node> map_type;
//! @name Constructor and destructor
//@{
/// \brief Constructor
///
/// \param A [in] The CrsMatrix to wrap as an
/// <tt>Operator<Scalar, ...></tt>.
CrsMatrixMultiplyOp (const Teuchos::RCP<const crs_matrix_type>& A) :
matrix_ (A)
{
// we don't require that A is fill complete; we will query for the
// importer/exporter at apply()-time
#ifdef HAVE_KOKKOSCLASSIC_CUDA_NODE_MEMORY_PROFILING
importTimer_ = Teuchos::TimeMonitor::getNewCounter ("CrsMatrixMultiplyOp::import");
exportTimer_ = Teuchos::TimeMonitor::getNewCounter ("CrsMatrixMultiplyOp::export");
#endif
}
//! Destructor (virtual for memory safety of derived classes).
virtual ~CrsMatrixMultiplyOp () {}
//@}
//! @name Methods implementing Operator
//@{
/// \brief Compute <tt>Y = beta*Y + alpha*Op(A)*X</tt>, where
/// <tt>Op(A)</tt> is either A, \f$A^T\f$, or \f$A^H\f$.
///
/// This method calls the underlying CrsMatrix object's
/// localMultiply<Scalar,Scalar>() method.
void
apply (const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& X,
MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& Y,
Teuchos::ETransp mode = Teuchos::NO_TRANS,
Scalar alpha = Teuchos::ScalarTraits<Scalar>::one (),
Scalar beta = Teuchos::ScalarTraits<Scalar>::zero ()) const
{
TEUCHOS_TEST_FOR_EXCEPTION
(! matrix_->isFillComplete (), std::runtime_error,
Teuchos::typeName (*this) << "::apply(): underlying matrix is not fill-complete.");
TEUCHOS_TEST_FOR_EXCEPTION
(X.getNumVectors () != Y.getNumVectors (), std::runtime_error,
Teuchos::typeName (*this) << "::apply(X,Y): X and Y must have the same number of vectors.");
TEUCHOS_TEST_FOR_EXCEPTION
(Teuchos::ScalarTraits<Scalar>::isComplex && mode == Teuchos::TRANS, std::logic_error,
Teuchos::typeName (*this) << "::apply() does not currently support transposed multiplications for complex scalar types.");
if (mode == Teuchos::NO_TRANS) {
applyNonTranspose (X, Y, alpha, beta);
}
else {
applyTranspose (X, Y, mode, alpha, beta);
}
}
/// \brief "Hybrid" Jacobi + (Gauss-Seidel or SOR) on \f$B = A X\f$.
///
/// "Hybrid" means Jacobi for interprocess communication, but
/// Successive Over-Relaxation (SOR) or Gauss-Seidel for
/// intraprocess computation. Gauss-Seidel is a special case of
/// SOR, where the damping factor is one.
///
/// The Forward or Backward sweep directions have their usual SOR
/// meaning within the process. Interprocess communication occurs
/// once before the sweep, as it would in Jacobi.
///
/// The Symmetric sweep direction means first Forward, then
/// Backward. Before each sweep is an interprocess communication,
/// as in Jacobi. Thus, Symmetric results in two interprocess
/// communication steps.
///
/// \param B [in] Right-hand side(s), in the range Map of the
/// matrix.
/// \param X [in/out] On input: initial guess(es). On output:
/// result multivector(s). This must be a domain Map view of
/// a column Map multivector.
/// \param D [in] Inverse of diagonal entries of the matrix A,
/// in the row Map of the matrix.
/// \param dampingFactor [in] SOR damping factor. A damping
/// factor of one results in Gauss-Seidel.
/// \param direction [in] Sweep direction: Forward, Backward, or
/// Symmetric.
/// \param numSweeps [in] Number of sweeps. We count each
/// Symmetric sweep (including both its Forward and its Backward
/// sweep) as one.
///
/// \pre Domain, range, and row Maps of the sparse matrix are all
/// the same. (The domain and range Maps must be the same
/// because this kernel overwrites its input. The row Map must
/// be the same because the kernel uses the same local indices
/// for the rows of the sparse matrix, and for the rows of the
/// input / output multivector.)
///
/// \pre No other argument aliases X.
void
gaussSeidel (const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &B,
MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &X,
const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &D,
const Scalar& dampingFactor,
const ESweepDirection direction,
const int numSweeps) const
{
using Teuchos::null;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcpFromRef;
using Teuchos::rcp_const_cast;
typedef Scalar OS;
typedef Map<LocalOrdinal, GlobalOrdinal, Node> map_type;
typedef Export<LocalOrdinal, GlobalOrdinal, Node> export_type;
typedef Import<LocalOrdinal, GlobalOrdinal, Node> import_type;
typedef MultiVector<OS, LocalOrdinal, GlobalOrdinal, Node> OSMV;
TEUCHOS_TEST_FOR_EXCEPTION
(numSweeps < 0, std::invalid_argument,
"gaussSeidel: The number of sweeps must be nonnegative, "
"but you provided numSweeps = " << numSweeps << " < 0.");
// Translate from global to local sweep direction.
// While doing this, validate the input.
KokkosClassic::ESweepDirection localDirection;
if (direction == Forward) {
localDirection = KokkosClassic::Forward;
}
else if (direction == Backward) {
localDirection = KokkosClassic::Backward;
}
else if (direction == Symmetric) {
// We'll control local sweep direction manually.
localDirection = KokkosClassic::Forward;
}
else {
TEUCHOS_TEST_FOR_EXCEPTION
(true, std::invalid_argument,
"gaussSeidel: The 'direction' enum does not have any of its valid "
"values: Forward, Backward, or Symmetric.");
}
if (numSweeps == 0) {
return; // Nothing to do.
}
// We don't need the Export object because this method assumes
// that the row, domain, and range Maps are the same. We do need
// the Import object, if there is one, though.
RCP<const import_type> importer = matrix_->getGraph()->getImporter();
RCP<const export_type> exporter = matrix_->getGraph()->getExporter();
TEUCHOS_TEST_FOR_EXCEPTION
(! exporter.is_null (), std::runtime_error,
"Tpetra's gaussSeidel implementation requires that the row, domain, "
"and range Maps be the same. This cannot be the case, because the "
"matrix has a nontrivial Export object.");
RCP<const map_type> domainMap = matrix_->getDomainMap ();
RCP<const map_type> rangeMap = matrix_->getRangeMap ();
RCP<const map_type> rowMap = matrix_->getGraph ()->getRowMap ();
RCP<const map_type> colMap = matrix_->getGraph ()->getColMap ();
#ifdef HAVE_TEUCHOS_DEBUG
{
// The relation 'isSameAs' is transitive. It's also a
// collective, so we don't have to do a "shared" test for
// exception (i.e., a global reduction on the test value).
TEUCHOS_TEST_FOR_EXCEPTION
(! X.getMap ()->isSameAs (*domainMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidel requires that the input "
"multivector X be in the domain Map of the matrix.");
TEUCHOS_TEST_FOR_EXCEPTION
(! B.getMap ()->isSameAs (*rangeMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidel requires that the input "
"B be in the range Map of the matrix.");
TEUCHOS_TEST_FOR_EXCEPTION
(! D.getMap ()->isSameAs (*rowMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidel requires that the input "
"D be in the row Map of the matrix.");
TEUCHOS_TEST_FOR_EXCEPTION
(! rowMap->isSameAs (*rangeMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidel requires that the row Map and the "
"range Map be the same (in the sense of Tpetra::Map::isSameAs).");
TEUCHOS_TEST_FOR_EXCEPTION
(! domainMap->isSameAs (*rangeMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidel requires that the domain Map and "
"the range Map of the matrix be the same.");
}
#else
// Forestall any compiler warnings for unused variables.
(void) rangeMap;
(void) rowMap;
#endif // HAVE_TEUCHOS_DEBUG
// If B is not constant stride, copy it into a constant stride
// multivector. We'l handle the right-hand side B first and deal
// with X right before the sweeps, to improve locality of the
// first sweep. (If the problem is small enough, then that will
// hopefully keep more of the entries of X in cache. This
// optimizes for the typical case of a small number of sweeps.)
RCP<const OSMV> B_in;
if (B.isConstantStride()) {
B_in = rcpFromRef (B);
}
else {
// The range Map and row Map are the same in this case, so we
// can use the (possibly cached) row Map multivector to store a
// constant stride copy of B. We don't have to copy back, since
// Gauss-Seidel won't modify B.
RCP<OSMV> B_in_nonconst = getRowMapMultiVector (B, true);
deep_copy (*B_in_nonconst, B);
B_in = rcp_const_cast<const OSMV> (B_in_nonconst);
TPETRA_EFFICIENCY_WARNING
(! B.isConstantStride (), std::runtime_error,
"gaussSeidel: The current implementation of the Gauss-Seidel kernel "
"requires that X and B both have constant stride. Since B does not "
"have constant stride, we had to make a copy. This is a limitation of "
"the current implementation and not your fault, but we still report it "
"as an efficiency warning for your information.");
}
// If X is not constant stride, copy it into a constant stride
// multivector. Also, make the column Map multivector X_colMap,
// and its domain Map view X_domainMap. (X actually must be a
// domain Map view of a column Map multivector; exploit this, if X
// has constant stride.)
RCP<OSMV> X_domainMap;
RCP<OSMV> X_colMap;
bool copiedInput = false;
if (importer.is_null ()) { // Domain and column Maps are the same.
if (X.isConstantStride ()) {
X_domainMap = rcpFromRef (X);
X_colMap = X_domainMap;
copiedInput = false;
}
else {
// Get a temporary column Map multivector, make a domain Map
// view of it, and copy X into the domain Map view. We have
// to copy here because we won't be doing Import operations.
X_colMap = getColumnMapMultiVector (X, true);
X_domainMap = X_colMap; // Domain and column Maps are the same.
deep_copy (*X_domainMap, X); // Copy X into the domain Map view.
copiedInput = true;
TPETRA_EFFICIENCY_WARNING
(! X.isConstantStride (), std::runtime_error,
"gaussSeidel: The current implementation of the Gauss-Seidel kernel "
"requires that X and B both have constant stride. Since X does not "
"have constant stride, we had to make a copy. This is a limitation of "
"the current implementation and not your fault, but we still report it "
"as an efficiency warning for your information.");
}
}
else { // We will be doing Import operations in the sweeps.
if (X.isConstantStride ()) {
X_domainMap = rcpFromRef (X);
// This kernel assumes that X is a domain Map view of a column
// Map multivector. We will only check if this is valid if
// the CMake configure Teuchos_ENABLE_DEBUG is ON.
X_colMap = X_domainMap->offsetViewNonConst (colMap, 0);
// Do the first Import for the first sweep. This simplifies
// the logic in the sweeps.
X_colMap->doImport (X, *importer, INSERT);
copiedInput = false;
}
else {
// Get a temporary column Map multivector X_colMap, and make a
// domain Map view X_domainMap of it. Instead of copying, we
// do an Import from X into X_domainMap. This saves us a
// copy, since the Import has to copy the data anyway.
X_colMap = getColumnMapMultiVector (X, true);
X_domainMap = X_colMap->offsetViewNonConst (domainMap, 0);
X_colMap->doImport (X, *importer, INSERT);
copiedInput = true;
TPETRA_EFFICIENCY_WARNING
(! X.isConstantStride (), std::runtime_error,
"gaussSeidel: The current implementation of the Gauss-Seidel kernel "
"requires that X and B both have constant stride. Since X does not "
"have constant stride, we had to make a copy. This is a limitation of "
"the current implementation and not your fault, but we still report it "
"as an efficiency warning for your information.");
}
}
for (int sweep = 0; sweep < numSweeps; ++sweep) {
if (! importer.is_null () && sweep > 0) {
// We already did the first Import for the zeroth sweep.
X_colMap->doImport (*X_domainMap, *importer, INSERT);
}
// Do local Gauss-Seidel.
if (direction != Symmetric) {
matrix_->template localGaussSeidel<OS,OS> (*B_in, *X_colMap, D,
dampingFactor,
localDirection);
}
else { // direction == Symmetric
matrix_->template localGaussSeidel<OS,OS> (*B_in, *X_colMap, D,
dampingFactor,
KokkosClassic::Forward);
// Communicate again before the Backward sweep.
if (! importer.is_null ()) {
X_colMap->doImport (*X_domainMap, *importer, INSERT);
}
matrix_->template localGaussSeidel<OS,OS> (*B_in, *X_colMap, D,
dampingFactor,
KokkosClassic::Backward);
}
}
if (copiedInput) {
deep_copy (X, *X_domainMap); // Copy back: X_domainMap -> X.
}
}
/// \brief Version of gaussSeidel(), with fewer requirements on X.
///
/// This method is just like gaussSeidel(), except that X need
/// only be in the domain Map. This method does not require that
/// X be a domain Map view of a column Map multivector. As a
/// result, this method must copy X into a domain Map multivector
/// before operating on it.
///
/// \param X [in/out] On input: initial guess(es). On output:
/// result multivector(s).
/// \param B [in] Right-hand side(s), in the range Map.
/// \param D [in] Inverse of diagonal entries of the matrix,
/// in the row Map.
/// \param dampingFactor [in] SOR damping factor. A damping
/// factor of one results in Gauss-Seidel.
/// \param direction [in] Sweep direction: Forward, Backward, or
/// Symmetric.
/// \param numSweeps [in] Number of sweeps. We count each
/// Symmetric sweep (including both its Forward and its
/// Backward sweep) as one.
///
/// \pre Domain, range, and row Maps of the sparse matrix are
/// all the same.
/// \pre No other argument aliases X.
void
gaussSeidelCopy (MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &X,
const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &B,
const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &D,
const Scalar& dampingFactor,
const ESweepDirection direction,
const int numSweeps) const
{
using Teuchos::null;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcpFromRef;
using Teuchos::rcp_const_cast;
typedef Scalar OS;
typedef Map<LocalOrdinal, GlobalOrdinal, Node> map_type;
typedef Export<LocalOrdinal, GlobalOrdinal, Node> export_type;
typedef Import<LocalOrdinal, GlobalOrdinal, Node> import_type;
typedef MultiVector<OS, LocalOrdinal, GlobalOrdinal, Node> OSMV;
TEUCHOS_TEST_FOR_EXCEPTION
(numSweeps < 0, std::invalid_argument,
"gaussSeidelCopy: The number of sweeps must be nonnegative, "
"but you provided numSweeps = " << numSweeps << " < 0.");
// Translate from global to local sweep direction.
// While doing this, validate the input.
KokkosClassic::ESweepDirection localDirection;
if (direction == Forward) {
localDirection = KokkosClassic::Forward;
}
else if (direction == Backward) {
localDirection = KokkosClassic::Backward;
}
else if (direction == Symmetric) {
// We'll control local sweep direction manually.
localDirection = KokkosClassic::Forward;
}
else {
TEUCHOS_TEST_FOR_EXCEPTION
(true, std::invalid_argument,
"gaussSeidelCopy: The 'direction' enum does not have any of its "
"valid values: Forward, Backward, or Symmetric.");
}
if (numSweeps == 0) {
return;
}
RCP<const import_type> importer = matrix_->getGraph()->getImporter();
RCP<const export_type> exporter = matrix_->getGraph()->getExporter();
TEUCHOS_TEST_FOR_EXCEPTION
(! exporter.is_null (),
std::runtime_error,
"Tpetra's gaussSeidelCopy implementation requires that the row, domain, "
"and range Maps be the same. This cannot be the case, because the "
"matrix has a nontrivial Export object.");
RCP<const map_type> domainMap = matrix_->getDomainMap ();
RCP<const map_type> rangeMap = matrix_->getRangeMap ();
RCP<const map_type> rowMap = matrix_->getGraph ()->getRowMap ();
RCP<const map_type> colMap = matrix_->getGraph ()->getColMap ();
#ifdef HAVE_TEUCHOS_DEBUG
{
// The relation 'isSameAs' is transitive. It's also a
// collective, so we don't have to do a "shared" test for
// exception (i.e., a global reduction on the test value).
TEUCHOS_TEST_FOR_EXCEPTION
(! X.getMap ()->isSameAs (*domainMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidelCopy requires that the input "
"multivector X be in the domain Map of the matrix.");
TEUCHOS_TEST_FOR_EXCEPTION
(! B.getMap ()->isSameAs (*rangeMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidelCopy requires that the input "
"B be in the range Map of the matrix.");
TEUCHOS_TEST_FOR_EXCEPTION
(! D.getMap ()->isSameAs (*rowMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidelCopy requires that the input "
"D be in the row Map of the matrix.");
TEUCHOS_TEST_FOR_EXCEPTION
(! rowMap->isSameAs (*rangeMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidelCopy requires that the row Map and the "
"range Map be the same (in the sense of Tpetra::Map::isSameAs).");
TEUCHOS_TEST_FOR_EXCEPTION
(! domainMap->isSameAs (*rangeMap), std::runtime_error,
"Tpetra::CrsMatrix::gaussSeidelCopy requires that the domain Map and "
"the range Map of the matrix be the same.");
}
#else
// Forestall any compiler warnings for unused variables.
(void) rangeMap;
(void) rowMap;
#endif // HAVE_TEUCHOS_DEBUG
// Fetch a (possibly cached) temporary column Map multivector
// X_colMap, and a domain Map view X_domainMap of it. Both have
// constant stride by construction. We know that the domain Map
// must include the column Map, because our Gauss-Seidel kernel
// requires that the row Map, domain Map, and range Map are all
// the same, and that each process owns all of its own diagonal
// entries of the matrix.
RCP<OSMV> X_colMap;
RCP<OSMV> X_domainMap;
bool copyBackOutput = false;
if (importer.is_null ()) {
if (X.isConstantStride ()) {
X_colMap = rcpFromRef (X);
X_domainMap = rcpFromRef (X);
// No need to copy back to X at end.
}
else { // We must copy X into a constant stride multivector.
// Just use the cached column Map multivector for that.
X_colMap = getColumnMapMultiVector (X, true);
// X_domainMap is always a domain Map view of the column Map
// multivector. In this case, the domain and column Maps are
// the same, so X_domainMap _is_ X_colMap.
X_domainMap = X_colMap;
deep_copy (*X_domainMap, X); // Copy X into constant stride multivector
copyBackOutput = true; // Don't forget to copy back at end.
TPETRA_EFFICIENCY_WARNING
(! X.isConstantStride (), std::runtime_error,
"gaussSeidelCopy: The current implementation of the Gauss-Seidel "
"kernel requires that X and B both have constant stride. Since X "
"does not have constant stride, we had to make a copy. This is a "
"limitation of the current implementation and not your fault, but we "
"still report it as an efficiency warning for your information.");
}
}
else { // Column Map and domain Map are _not_ the same.
X_colMap = getColumnMapMultiVector (X);
X_domainMap = X_colMap->offsetViewNonConst (domainMap, 0);
// We could just copy X into X_domainMap. However, that wastes
// a copy, because the Import also does a copy (plus
// communication). Since the typical use case for Gauss-Seidel
// is a small number of sweeps (2 is typical), we don't want to
// waste that copy. Thus, we do the Import here, and skip the
// first Import in the first sweep. Importing directly from X
// effects the copy into X_domainMap (which is a view of
// X_colMap).
X_colMap->doImport (X, *importer, INSERT);
copyBackOutput = true; // Don't forget to copy back at end.
}
// The Gauss-Seidel / SOR kernel expects multivectors of constant
// stride. X_colMap is by construction, but B might not be. If
// it's not, we have to make a copy.
RCP<const OSMV> B_in;
if (B.isConstantStride ()) {
B_in = rcpFromRef (B);
}
else {
// Range Map and row Map are the same in this case, so we can
// use the cached row Map multivector to store a constant stride
// copy of B.
RCP<OSMV> B_in_nonconst = getRowMapMultiVector (B, true);
*B_in_nonconst = B;
B_in = rcp_const_cast<const OSMV> (B_in_nonconst);
TPETRA_EFFICIENCY_WARNING
(! B.isConstantStride (), std::runtime_error,
"gaussSeidelCopy: The current implementation requires that B have "
"constant stride. Since B does not have constant stride, we had to "
"copy it into a separate constant-stride multivector. This is a "
"limitation of the current implementation and not your fault, but we "
"still report it as an efficiency warning for your information.");
}
for (int sweep = 0; sweep < numSweeps; ++sweep) {
if (! importer.is_null () && sweep > 0) {
// We already did the first Import for the zeroth sweep above.
X_colMap->doImport (*X_domainMap, *importer, INSERT);
}
// Do local Gauss-Seidel.
if (direction != Symmetric) {
matrix_->template localGaussSeidel<OS,OS> (*B_in, *X_colMap, D,
dampingFactor,
localDirection);
}
else { // direction == Symmetric
matrix_->template localGaussSeidel<OS,OS> (*B_in, *X_colMap, D,
dampingFactor,
KokkosClassic::Forward);
// Communicate again before the Backward sweep, if necessary.
if (! importer.is_null ()) {
X_colMap->doImport (*X_domainMap, *importer, INSERT);
}
matrix_->template localGaussSeidel<OS,OS> (*B_in, *X_colMap, D,
dampingFactor,
KokkosClassic::Backward);
}
}
if (copyBackOutput) {
deep_copy (X, *X_domainMap); // Copy result back into X.
}
}
/// \brief Whether this Operator's apply() method can apply the
/// transpose or conjugate transpose.
///
/// This is always true, since it is true for the CrsMatrix that
/// this object wraps.
bool hasTransposeApply() const {
return true;
}
//! The domain Map of this Operator.
Teuchos::RCP<const map_type> getDomainMap () const {
return matrix_->getDomainMap ();
}
//! The range Map of this Operator.
Teuchos::RCP<const map_type> getRangeMap () const {
return matrix_->getRangeMap ();
}
//@}
protected:
typedef MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> MV;
//! The underlying CrsMatrix object.
const Teuchos::RCP<const crs_matrix_type> matrix_;
/// \brief Column Map MultiVector used in apply().
///
/// This is a column Map MultiVector. It is used as the target of
/// the forward mode Import operation (if necessary) in
/// applyNonTranspose(), and the source of the reverse mode Export
/// operation (if necessary) in applyTranspose(). Both of these
/// methods create this MultiVector on demand if needed, and reuse
/// it (if possible) for subsequent calls.
///
/// This is declared <tt>mutable</tt> because the apply() method
/// is const, yet the method needs to cache the MultiVector for
/// later use.
mutable Teuchos::RCP<MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > importMV_;
/// \brief Row Map MultiVector used in apply().
///
/// This is a row Map MultiVector. It is uses as the source of
/// the forward mode Export operation (if necessary) in
/// applyNonTranspose(), and the target of the reverse mode Import
/// operation (if necessary) in applyTranspose(). Both of these
/// methods create this MultiVector on demand if needed, and reuse
/// it (if possible) for subsequent calls.
///
/// This is declared <tt>mutable</tt> because the apply() method
/// is const, yet the method needs to cache the MultiVector for
/// later use.
mutable Teuchos::RCP<MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > exportMV_;
#ifdef HAVE_KOKKOSCLASSIC_CUDA_NODE_MEMORY_PROFILING
Teuchos::RCP<Teuchos::Time> importTimer_, exportTimer_;
#endif
/// \brief Apply the transpose or conjugate transpose of the
/// matrix to X_in, producing Y_in.
void
applyTranspose (const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& X_in,
MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> &Y_in,
Teuchos::ETransp mode,
Scalar alpha,
Scalar beta) const
{
typedef Teuchos::ScalarTraits<Scalar> ST;
using Teuchos::null;
int myImageID = Teuchos::rank(*matrix_->getComm());
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
Teuchos::RCP<Teuchos::FancyOStream> out = Teuchos::VerboseObjectBase::getDefaultOStream();
if (myImageID == 0) {
*out << "Entering CrsMatrixMultiplyOp::applyTranspose()" << std::endl
<< "Column Map: " << std::endl;
}
*out << matrix_->getColMap() << std::endl;
if (myImageID == 0) {
*out << "Initial input: " << std::endl;
}
X_in.describe(*out,Teuchos::VERB_EXTREME);
#endif
const size_t numVectors = X_in.getNumVectors();
// because of Views, it is difficult to determine if X and Y point to the same data.
// however, if they reference the exact same object, we will do the user the favor of copying X into new storage (with a warning)
// we ony need to do this if we have trivial importers; otherwise, we don't actually apply the operator from X into Y
Teuchos::RCP<const Import<LocalOrdinal,GlobalOrdinal,Node> > importer = matrix_->getGraph()->getImporter();
Teuchos::RCP<const Export<LocalOrdinal,GlobalOrdinal,Node> > exporter = matrix_->getGraph()->getExporter();
// access X indirectly, in case we need to create temporary storage
Teuchos::RCP<const MV> X;
// some parameters for below
const bool Y_is_replicated = !Y_in.isDistributed(),
Y_is_overwritten = (beta == ST::zero());
if (Y_is_replicated && myImageID > 0) {
beta = ST::zero();
}
// currently, cannot multiply from multivector of non-constant stride
if (X_in.isConstantStride() == false && importer==null) {
// generate a strided copy of X_in
X = Teuchos::rcp(new MV(X_in));
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) *out << "X is not constant stride, duplicating X results in a strided copy" << std::endl;
X->describe(*out,Teuchos::VERB_EXTREME);
#endif
}
else {
// just temporary, so this non-owning RCP is okay
X = Teuchos::rcp(&X_in, false);
}
// set up import/export temporary multivectors
if (importer != null) {
if (importMV_ != null && importMV_->getNumVectors() != numVectors) importMV_ = null;
if (importMV_ == null) {
importMV_ = Teuchos::rcp( new MV(matrix_->getColMap(),numVectors) );
}
}
if (exporter != null) {
if (exportMV_ != null && exportMV_->getNumVectors() != numVectors) exportMV_ = null;
if (exportMV_ == null) {
exportMV_ = Teuchos::rcp( new MV(matrix_->getRowMap(),numVectors) );
}
}
// If we have a non-trivial exporter, we must import elements that are permuted or are on other processors
if (exporter != null) {
{
#ifdef HAVE_KOKKOSCLASSIC_CUDA_NODE_MEMORY_PROFILING
Teuchos::TimeMonitor lcltimer(*importTimer_);
#endif
exportMV_->doImport(X_in,*exporter,INSERT);
}
// multiply out of exportMV_
X = exportMV_;
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) {
*out << "Performed import of X using exporter..." << std::endl;
}
X->describe(*out,Teuchos::VERB_EXTREME);
#endif
}
// If we have a non-trivial importer, we must export elements that are permuted or belong to other processors
// We will compute solution into the to-be-exported MV; get a view
if (importer != null) {
// Do actual computation
matrix_->template localMultiply<Scalar, Scalar>(*X, *importMV_, mode, alpha, ST::zero());
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) *out << "Import vector after localMultiply()..." << std::endl;
importMV_->describe(*out,Teuchos::VERB_EXTREME);
#endif
if (Y_is_overwritten) Y_in.putScalar(ST::zero());
else Y_in.scale(beta);
//
{
#ifdef HAVE_KOKKOSCLASSIC_CUDA_NODE_MEMORY_PROFILING
Teuchos::TimeMonitor lcltimer(*importTimer_);
#endif
Y_in.doExport(*importMV_,*importer,ADD);
}
}
// otherwise, multiply into Y
else {
// can't multiply in-situ; can't multiply into non-strided multivector
if (Y_in.isConstantStride() == false || X.getRawPtr() == &Y_in) {
// generate a strided copy of Y
MV Y(Y_in);
matrix_->template localMultiply<Scalar, Scalar>(*X, Y, mode, alpha, beta);
deep_copy (Y_in, Y);
}
else {
matrix_->template localMultiply<Scalar, Scalar>(*X, Y_in, mode, alpha, beta);
}
}
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) *out << "Y_in vector after local multiply/export..." << std::endl;
Y_in.describe(*out,Teuchos::VERB_EXTREME);
#endif
// Handle case of rangemap being a local replicated map: in this case, sum contributions from each processor
if (Y_is_replicated) {
Y_in.reduce();
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) *out << "Output vector is local; result after reduce()..." << std::endl;
Y_in.describe(*out,Teuchos::VERB_EXTREME);
#endif
}
}
//! Apply the matrix (not its transpose) to X_in, producing Y_in.
void
applyNonTranspose (const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& X_in,
MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& Y_in,
Scalar alpha,
Scalar beta) const
{
using Teuchos::null;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcp_const_cast;
using Teuchos::rcpFromRef;
typedef Export<LocalOrdinal,GlobalOrdinal,Node> export_type;
typedef Import<LocalOrdinal,GlobalOrdinal,Node> import_type;
typedef Teuchos::ScalarTraits<Scalar> STS;
const int myImageID = matrix_->getComm ()->getRank ();
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
RCP<Teuchos::FancyOStream> out = Teuchos::VerboseObjectBase::getDefaultOStream();
if (myImageID == 0) {
*out << "Entering CrsMatrixMultiplyOp::applyNonTranspose()" << std::endl
<< "Column Map: " << std::endl;
}
*out << matrix_->getColMap() << std::endl;
if (myImageID == 0) {
*out << "Initial input: " << std::endl;
}
X_in.describe (*out, Teuchos::VERB_EXTREME);
#endif // TPETRA_CRSMATRIX_MULTIPLY_DUMP
// because of Views, it is difficult to determine if X and Y point to the same data.
// however, if they reference the exact same object, we will do the user the favor of copying X into new storage (with a warning)
// we ony need to do this if we have trivial importers; otherwise, we don't actually apply the operator from X into Y
RCP<const import_type> importer = matrix_->getGraph()->getImporter();
RCP<const export_type> exporter = matrix_->getGraph()->getExporter();
// If beta == 0, then the output MV will be overwritten; none of
// its entries should be read. (Sparse BLAS semantics say that we
// must ignore any Inf or NaN entries in Y_in, if beta is zero.)
// This matters if we need to do an Export operation; see below.
const bool Y_is_overwritten = (beta == STS::zero());
// We treat the case of a replicated MV output specially.
const bool Y_is_replicated = ! Y_in.isDistributed ();
// This is part of the "hack" for replicated MV output. We'll let
// each process do its thing, but do an all-reduce at the end to
// sum up the results. Setting beta=0 on all processes but Proc 0
// makes the math work out for the all-reduce. (This assumes that
// the replicated data is correctly replicated, so that the data
// are the same on all processes.)
if (Y_is_replicated && myImageID > 0) {
beta = STS::zero();
}
// Temporary MV for Import operation. After the block of code
// below, this will be an (Imported if necessary) column Map MV
// ready to give to localMultiply().
RCP<const MV> X_colMap;
if (importer.is_null ()) {
if (! X_in.isConstantStride ()) {
// Not all sparse mat-vec kernels can handle an input MV with
// nonconstant stride correctly, so we have to copy it in that
// case into a constant stride MV. To make a constant stride
// copy of X_in, we force creation of the column (== domain)
// Map MV (if it hasn't already been created, else fetch the
// cached copy). This avoids creating a new MV each time.
RCP<MV> X_colMapNonConst = getColumnMapMultiVector (X_in, true);
*X_colMapNonConst = X_in; // MV assignment just copies the data.
X_colMap = rcp_const_cast<const MV> (X_colMapNonConst);
}
else {
// The domain and column Maps are the same, so do the local
// multiply using the domain Map input MV X_in.
X_colMap = rcpFromRef (X_in);
}
}
else {
// We're doing an Import anyway, which will copy the relevant
// elements of the domain Map MV X_in into a separate column Map
// MV. Thus, we don't have to worry whether X_in is constant
// stride.
RCP<MV> X_colMapNonConst = getColumnMapMultiVector (X_in);
// Import from the domain Map MV to the column Map MV.
{
#ifdef HAVE_KOKKOSCLASSIC_CUDA_NODE_MEMORY_PROFILING
Teuchos::TimeMonitor lcltimer (*importTimer_);
#endif
X_colMapNonConst->doImport (X_in, *importer, INSERT);
}
X_colMap = rcp_const_cast<const MV> (X_colMapNonConst);
}
// Temporary MV for Export operation, or for copying a nonconstant
// stride output MV into a constant stride MV.
RCP<MV> Y_rowMap = getRowMapMultiVector (Y_in);
// If we have a nontrivial Export object, we must perform an
// Export. In that case, the local multiply result will go into
// the row Map multivector. We don't have to make a
// constant-stride version of Y_in in this case, because we had to
// make a constant stride Y_rowMap MV and do an Export anyway.
if (! exporter.is_null ()) {
matrix_->template localMultiply<Scalar, Scalar> (*X_colMap, *Y_rowMap,
Teuchos::NO_TRANS,
alpha, STS::zero());
// If we're overwriting the output MV Y_in completely (beta ==
// 0), then make sure that it is filled with zeros before we do
// the Export. Otherwise, the ADD combine mode will use data in
// Y_in, which is supposed to be zero.
if (Y_is_overwritten) {
Y_in.putScalar (STS::zero());
}
else {
// Scale the output MV by beta, so that the Export sums in the
// mat-vec contribution: Y_in = beta*Y_in + alpha*A*X_in.
Y_in.scale (beta);
}
// Do the Export operation.
{
#ifdef HAVE_KOKKOSCLASSIC_CUDA_NODE_MEMORY_PROFILING
Teuchos::TimeMonitor lcltimer (*exportTimer_);
#endif
Y_in.doExport (*Y_rowMap, *exporter, ADD);
}
}
else { // Don't do an Export: row Map and range Map are the same.
//
// If Y_in does not have constant stride, or if the column Map
// MV aliases Y_in, then we can't let the kernel write directly
// to Y_in. Instead, we have to use the cached row (== range)
// Map MV as temporary storage.
if (! Y_in.isConstantStride () || X_colMap.getRawPtr () == &Y_in) {
// Force creating the MV if it hasn't been created already.
// This will reuse a previously created cached MV.
Y_rowMap = getRowMapMultiVector (Y_in, true);
// If beta == 0, we don't need to copy Y_in into Y_rowMap,
// since we're overwriting it anyway.
if (beta != STS::zero ()) {
deep_copy (*Y_rowMap, Y_in);
}
matrix_->template localMultiply<Scalar, Scalar> (*X_colMap,
*Y_rowMap,
Teuchos::NO_TRANS,
alpha, beta);
deep_copy (Y_in, *Y_rowMap);
}
else {
matrix_->template localMultiply<Scalar, Scalar> (*X_colMap, Y_in,
Teuchos::NO_TRANS,
alpha, beta);
}
}
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) {
*out << "Result Y_in after localMultiply and Export:" << std::endl;
}
Y_in.describe (*out, Teuchos::VERB_EXTREME);
#endif // TPETRA_CRSMATRIX_MULTIPLY_DUMP
// If the range Map is a locally replicated Map, sum up
// contributions from each process. We set beta = 0 on all
// processes but Proc 0 initially, so this will handle the scaling
// factor beta correctly.
if (Y_is_replicated) {
Y_in.reduce ();
#ifdef TPETRA_CRSMATRIX_MULTIPLY_DUMP
if (myImageID == 0) {
*out << "Result Y_in after reduce:" << std::endl;
}
Y_in.describe (*out, Teuchos::VERB_EXTREME);
#endif // TPETRA_CRSMATRIX_MULTIPLY_DUMP
}
}
private:
/// \brief Create a (or fetch a cached) column Map MultiVector.
///
/// \param X_domainMap [in] A domain Map Multivector. The
/// returned MultiVector, if nonnull, will have the same number
/// of columns as Y_domainMap.
///
/// \param force [in] Force creating the MultiVector if it hasn't
/// been created already.
///
/// The \c force parameter is helpful when the domain Map and the
/// column Map are the same (so that normally we wouldn't need the
/// column Map MultiVector), but the following (for example)
/// holds:
///
/// 1. The kernel needs a constant stride input MultiVector, but
/// the given input MultiVector is not constant stride.
///
/// We don't test for the above in this method, because it depends
/// on the specific kernel.
Teuchos::RCP<MV>
getColumnMapMultiVector (const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& X_domainMap,
const bool force = false) const
{
using Teuchos::null;
using Teuchos::RCP;
using Teuchos::rcp;
typedef Import<LocalOrdinal,GlobalOrdinal,Node> import_type;
typedef Map<LocalOrdinal,GlobalOrdinal,Node> map_type;
const size_t numVecs = X_domainMap.getNumVectors ();
RCP<const import_type> importer = matrix_->getGraph ()->getImporter ();
RCP<const map_type> colMap = matrix_->getColMap ();
RCP<MV> X_colMap; // null by default
// If the Import object is trivial (null), then we don't need a
// separate column Map multivector. Just return null in that
// case. The caller is responsible for knowing not to use the
// returned null pointer.
//
// If the Import is nontrivial, then we do need a separate
// column Map multivector for the Import operation. Check in
// that case if we have to (re)create the column Map
// multivector.
if (! importer.is_null () || force) {
if (importMV_.is_null () || importMV_->getNumVectors () != numVecs) {
X_colMap = rcp (new MV (colMap, numVecs));
// Cache the newly created multivector for later reuse.
importMV_ = X_colMap;
}
else { // Yay, we can reuse the cached multivector!
X_colMap = importMV_;
// mfh 09 Jan 2013: We don't have to fill with zeros first,
// because the Import uses INSERT combine mode, which overwrites
// existing entries.
//
//X_colMap->putScalar (STS::zero ());
}
}
return X_colMap;
}
/// \brief Create a (or fetch a cached) row Map MultiVector.
///
/// \param Y_rangeMap [in] A range Map Multivector. The returned
/// MultiVector, if nonnull, will have the same number of
/// columns as Y_rangeMap.
///
/// \param force [in] Force creating the MultiVector if it hasn't
/// been created already.
///
/// The \c force parameter is helpful when the range Map and the
/// row Map are the same (so that normally we wouldn't need the
/// row Map MultiVector), but one of the following holds:
///
/// 1. The kernel needs a constant stride output MultiVector,
/// but the given output MultiVector is not constant stride.
///
/// 2. The kernel does not permit aliasing of its input and output
/// MultiVector arguments, but they do alias each other.
///
/// We don't test for the above in this method, because it depends
/// on the specific kernel.
Teuchos::RCP<MV>
getRowMapMultiVector (const MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>& Y_rangeMap,
const bool force = false) const
{
using Teuchos::null;
using Teuchos::RCP;
using Teuchos::rcp;
typedef Export<LocalOrdinal,GlobalOrdinal,Node> export_type;
typedef Map<LocalOrdinal,GlobalOrdinal,Node> map_type;
const size_t numVecs = Y_rangeMap.getNumVectors ();
RCP<const export_type> exporter = matrix_->getGraph ()->getExporter ();
RCP<const map_type> rowMap = matrix_->getRowMap ();
RCP<MV> Y_rowMap; // null by default
// If the Export object is trivial (null), then we don't need a
// separate row Map multivector. Just return null in that case.
// The caller is responsible for knowing not to use the returned
// null pointer.
//
// If the Export is nontrivial, then we do need a separate row
// Map multivector for the Export operation. Check in that case
// if we have to (re)create the row Map multivector.
if (! exporter.is_null () || force) {
if (exportMV_.is_null () || exportMV_->getNumVectors () != numVecs) {
Y_rowMap = rcp (new MV (rowMap, numVecs));
// Cache the newly created multivector for later reuse.
exportMV_ = Y_rowMap;
}
else { // Yay, we can reuse the cached multivector!
Y_rowMap = exportMV_;
}
}
return Y_rowMap;
}
};
/// \brief Non-member function to create a CrsMatrixMultiplyOp.
/// \relatesalso CrsMatrixMultiplyOp
///
/// The function has the same template parameters of CrsMatrixMultiplyOp.
///
/// \param A [in] The CrsMatrix instance to wrap in an CrsMatrixMultiplyOp.
/// \return The CrsMatrixMultiplyOp wrapper for the given CrsMatrix.
template <class OpScalar,
class MatScalar,
class LocalOrdinal,
class GlobalOrdinal,
class Node>
Teuchos::RCP<
CrsMatrixMultiplyOp<OpScalar, MatScalar, LocalOrdinal, GlobalOrdinal, Node> >
createCrsMatrixMultiplyOp (const Teuchos::RCP<
const CrsMatrix<MatScalar, LocalOrdinal, GlobalOrdinal, Node> >& A)
{
typedef CrsMatrixMultiplyOp<OpScalar, MatScalar, LocalOrdinal,
GlobalOrdinal, Node> op_type;
return Teuchos::rcp (new op_type (A));
}
} // end of namespace Tpetra
#endif // TPETRA_CRSMATRIXMULTIPLYOP_HPP
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