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// ***********************************************************************
//
// Tpetra: Templated Linear Algebra Services Package
// Copyright (2008) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
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// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
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// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ************************************************************************
// @HEADER
#ifndef TPETRA_UTIL_HPP
#define TPETRA_UTIL_HPP
/*!
\file Tpetra_Util.hpp
\brief Stand-alone utility functions and macros.
Tpetra_Util contains utility functions macros that are used
throughout Tpetra, by many classes and functions. They are placed
here so that they can be updated and maintained in a single spot.
*/
#include "Tpetra_ConfigDefs.hpp" // for map, vector, string, and iostream
#include "Kokkos_DualView.hpp"
#include "Teuchos_Utils.hpp"
#include "Teuchos_Assert.hpp"
#include <algorithm>
#include <iterator>
#include <sstream>
#if defined(HAVE_TPETRA_THROW_EFFICIENCY_WARNINGS) || defined(HAVE_TPETRA_PRINT_EFFICIENCY_WARNINGS)
/// \brief Print or throw an efficency warning.
///
/// This macro is only for use by Tpetra developers. It is only to be
/// used in the implementation of a Tpetra class' instance method.
///
/// If HAVE_TPETRA_THROW_EFFICIENCY_WARNINGS is defined, throw an
/// exception of type Exception, whose exception message will include
/// \c msg (along with other useful information).
///
/// If HAVE_TPETRA_PRINT_EFFICIENCY_WARNINGS is defined, print the
/// given message to std::cerr, along with other useful information.
///
/// This macro must be called in an instance method of a class.
/// (Alas, C++ gives us no way to search the scope for a list of
/// defined names. Otherwise, the macro could search for "this" to
/// determine whether it is in a class' instance method.)
///
/// Macro arguments:
///
/// throw_exception_test: Boolean expression to evaluate. If true,
/// this macro will trigger the efficiency warning. The test will be
/// evaluated at most once. Nevertheless, the test should not have
/// side effects, since it will not be evaluated at all if neither
/// HAVE_TPETRA_THROW_EFFICIENCY_WARNINGS nor
/// HAVE_TPETRA_PRINT_EFFICIENCY_WARNINGS are defined.
///
/// Exception: The type of exception to throw, if throw_exception_test
/// evaluates to true and TPETRA_THROWS_EFFICIENCY_WARNINGS is
/// defined. The Exception should be a subclass of std::exception.
///
/// msg: The message to include in the warning. The warning also
/// includes the name of the class, and other useful information.
///
#define TPETRA_EFFICIENCY_WARNING(throw_exception_test,Exception,msg) \
{ \
const bool tpetraEfficiencyWarningTest = (throw_exception_test); \
if (tpetraEfficiencyWarningTest) { \
std::ostringstream errStream; \
errStream << Teuchos::typeName(*this) << ":" << std::endl; \
errStream << "Efficiency warning: " << #throw_exception_test << std::endl; \
errStream << msg; \
std::string err = errStream.str(); \
if (TPETRA_PRINTS_EFFICIENCY_WARNINGS && tpetraEfficiencyWarningTest) { \
std::cerr << err << std::endl; \
} \
TEUCHOS_TEST_FOR_EXCEPTION(TPETRA_THROWS_EFFICIENCY_WARNINGS && tpetraEfficiencyWarningTest, Exception, err); \
} \
}
#else
/// \brief Print or throw an efficency warning.
///
/// This macro is only for use by Tpetra developers. It is only to be
/// used in the implementation of a Tpetra class' instance method.
///
/// If HAVE_TPETRA_THROW_EFFICIENCY_WARNINGS is defined, throw an
/// exception of type Exception, whose exception message will include
/// \c msg (along with other useful information).
///
/// If HAVE_TPETRA_PRINT_EFFICIENCY_WARNINGS is defined, print the
/// given message to std::cerr, along with other useful information.
///
/// This macro must be called in an instance method of a class.
/// (Alas, C++ gives us no way to search the scope for a list of
/// defined names. Otherwise, the macro could search for "this" to
/// determine whether it is in a class' instance method.)
///
/// Macro arguments:
///
/// throw_exception_test: Boolean expression to evaluate. If true,
/// this macro will trigger the efficiency warning. The test will be
/// evaluated at most once. Nevertheless, the test should not have
/// side effects, since it will not be evaluated at all if neither
/// HAVE_TPETRA_THROW_EFFICIENCY_WARNINGS nor
/// HAVE_TPETRA_PRINT_EFFICIENCY_WARNINGS are defined.
///
/// Exception: The type of exception to throw, if throw_exception_test
/// evaluates to true and TPETRA_THROWS_EFFICIENCY_WARNINGS is
/// defined. The Exception should be a subclass of std::exception.
///
/// msg: The message to include in the warning. The warning also
/// includes the name of the class, and other useful information.
///
#define TPETRA_EFFICIENCY_WARNING(throw_exception_test,Exception,msg)
#endif
// handle an abuse warning, according to HAVE_TPETRA_THROW_ABUSE_WARNINGS and HAVE_TPETRA_PRINT_ABUSE_WARNINGS
#if defined(HAVE_TPETRA_THROW_ABUSE_WARNINGS) || defined(HAVE_TPETRA_PRINT_ABUSE_WARNINGS)
//! Handle an abuse warning, according to HAVE_TPETRA_THROW_ABUSE_WARNINGS and HAVE_TPETRA_PRINT_ABUSE_WARNINGS
#define TPETRA_ABUSE_WARNING(throw_exception_test,Exception,msg) \
{ \
std::ostringstream errStream; \
errStream << Teuchos::typeName(*this) << msg; \
std::string err = errStream.str(); \
if (TPETRA_PRINTS_ABUSE_WARNINGS && (throw_exception_test)) { \
std::cerr << err << std::endl; \
} \
TEUCHOS_TEST_FOR_EXCEPTION(TPETRA_THROWS_ABUSE_WARNINGS && (throw_exception_test), Exception, err); \
}
#else
//! Handle an abuse warning, according to HAVE_TPETRA_THROW_ABUSE_WARNINGS and HAVE_TPETRA_PRINT_ABUSE_WARNINGS
#define TPETRA_ABUSE_WARNING(throw_exception_test,Exception,msg)
#endif
/// \brief Test for exception, with reduction over the given communicator.
///
/// This is like Teuchos' TEUCHOS_TEST_FOR_EXCEPTION macro, except
/// that it performs an all-reduce over the given communicator to
/// ensure that all processes throw the exception if the test is true
/// on at least one process.
///
/// Macro arguments:
///
/// throw_exception_test: Boolean expression to evaluate. If true on
/// at least one calling process in the given communicator, this macro
/// will throw an exception of the given type on all processes in the
/// communicator. The exception message may differ on different
/// processes. The expression will only be evaluated once on each
/// process.
///
/// Exception: The type of exception to throw, if throw_exception_test
/// evaluates to true on at least one process in the given
/// communicator. The Exception should be a subclass of
/// std::exception.
///
/// msg: The message to include in the warning. The warning also
/// includes the name of the class, and the maximum process rank on
/// which the test evaluated to true. The message may be different on
/// different processes.
///
/// comm: The communicator (instance of a subclass of
/// Teuchos::Comm<int>) over which to test. This must evaluate to a
/// class instance or reference, not a Teuchos::RCP of an instance.
#define SHARED_TEST_FOR_EXCEPTION(throw_exception_test,Exception,msg,comm) \
{ \
using Teuchos::outArg; \
const int lcl_throw_exception = (throw_exception_test) ? Teuchos::rank(comm)+1 : 0; \
int gbl_throw; \
Teuchos::reduceAll(comm,Teuchos::REDUCE_MAX,lcl_throw_exception,outArg(gbl_throw)); \
TEUCHOS_TEST_FOR_EXCEPTION(gbl_throw,Exception, \
msg << " Failure on at least one process, including process " << gbl_throw-1 << "." << std::endl); \
}
#ifdef HAVE_TEUCHOS_DEBUG
//! If TEUCHOS_DEBUG is defined, then it calls SHARED_TEST_FOR_EXCEPTION. Otherwise, it calls TEUCHOS_TEST_FOR_EXCEPTION
#define SWITCHED_TEST_FOR_EXCEPTION(throw_exception_test,Exception,msg,comm) \
{ \
SHARED_TEST_FOR_EXCEPTION(throw_exception_test,Exception,msg,comm); \
}
#else
//! If TEUCHOS_DEBUG is defined, then it calls SHARED_TEST_FOR_EXCEPTION. Otherwise, it calls TEUCHOS_TEST_FOR_EXCEPTION
#define SWITCHED_TEST_FOR_EXCEPTION(throw_exception_test,Exception,msg,comm) \
{ \
TEUCHOS_TEST_FOR_EXCEPTION(throw_exception_test,Exception,msg); \
}
#endif
namespace Tpetra {
/// \brief Efficiently insert or replace an entry in an std::map.
///
/// \tparam MapType Specialization of std::map
/// \tparam KeyArgType Type of keys of the std::map
/// \tparam ValueArgType Type of values of the std::map
///
/// This function is taken from Scott Meyers' "Effective STL", Item
/// 24. If the given std::map m already contains an entry with key
/// k, replace its value with the given value v. Otherwise, insert
/// (k,v) into the std::map. In both cases, return an iterator that
/// points to the inserted or updated entry.
template<typename MapType, typename KeyArgType, typename ValueArgType>
typename MapType::iterator efficientAddOrUpdate(MapType& m,
const KeyArgType & k,
const ValueArgType & v)
{
typename MapType::iterator lb = m.lower_bound(k);
if(lb != m.end() && !(m.key_comp()(k, lb->first))) {
lb->second = v;
return(lb);
}
else {
typedef typename MapType::value_type MVT;
return(m.insert(lb, MVT(k, v)));
}
}
/// \namespace SortDetails
/// \brief Implementation details of sort routines used by Tpetra.
///
/// \warning The contents of this namespace are an implementation
/// detail of Tpetra. Tpetra users should not use this namespace
/// or any of its contents, as they may change at any time without
/// deprecation warnings.
namespace SortDetails {
/**
* \brief Determines whether or not a random access sequence is already sorted.
*
* @param first An iterator pointing to the beginning of the sequence.
* @param last An iterator pointing to the end of the sequence.
*
* @return True if the sequence is already sorted, else false.
*/
template<class IT1>
bool isAlreadySorted(const IT1& first, const IT1& last){
typedef typename std::iterator_traits<IT1>::difference_type DT;
DT myit = Teuchos::OrdinalTraits<DT>::one();
const DT sz = last - first;
for(;myit < sz; ++myit){
if(first[myit] < first[myit-1]){
return false;
}
}
return true;
}
/**
* \brief Determines the pivot point as part of the quicksort routine.
*
* @param first An iterator pointing to the beginning of the array segment
* we are trying to find a pivot for.
* @param last An iterator pointing to the ending of the array segment
* we are trying to find a pivot for.
* @return The pivot point for the given array segment.
*/
template<class IT>
IT getPivot(const IT& first, const IT& last){
IT pivot(first+(last-first)/2);
if(*first<=*pivot && *(last-1)<=*first) pivot=first;
else if(*(last-1)<=*pivot && *first<= *(last-1)) pivot = last-1;
return pivot;
}
/**
* \brief Partition operation for \c quicksort2().
*
* This is a helper routine for \c quicksort2(). It performs the
* partition step in Quicksort. All of the input argument iterators
* are random access iterators.
*
* @param first1 An iterator pointing to the beginning of the first array.
* @param last1 An iterator pointing to the end of the first array.
* @param first2 An iterator pointing to the beginning of the second array.
* @param last2 An iterator pointing to the end of the second array.
* @param pivot A pivot point calculated by the pivot function.
* @return An iterator pointing to where the partition should be made.
*/
template<class IT1, class IT2>
IT1 partition2(
const IT1& first1,
const IT1& last1,
const IT2& first2,
const IT2& last2,
const IT1& pivot)
{
typename std::iterator_traits<IT1>::value_type piv(*pivot);
std::swap(*pivot, *(last1-1));
std::swap(first2[(pivot-first1)], *(last2-1));
IT1 store1=first1;
for(IT1 it=first1; it!=last1-1; ++it){
if(*it<=piv){
std::swap(*store1, *it);
std::swap(first2[(store1-first1)], first2[(it-first1)]);
++store1;
}
}
std::swap(*(last1-1), *store1);
std::swap(*(last2-1), first2[store1-first1]);
return store1;
}
/**
* \brief Partition operation for \c quicksort3().
*
* This is a helper routine for \c quicksort3(). It performs the
* partition step in Quicksort. All of the input argument iterators
* are random access iterators.
*
* @param first1 An iterator pointing to the beginning of the first array.
* @param last1 An iterator pointing to the end of the first array.
* @param first2 An iterator pointing to the beginning of the second array.
* @param last2 An iterator pointing to the end of the second array.
* @param first3 An iterator pointing to the beginning of the third array.
* @param last3 An iterator pointing to the end of the third array.
* @param pivot A pivot point calculated by the pivot function.
* @return An iterator pointing to where the partition should be made.
*/
template<class IT1, class IT2, class IT3>
IT1 partition3(
const IT1& first1,
const IT1& last1,
const IT2& first2,
const IT2& last2,
const IT3& first3,
const IT3& last3,
const IT1& pivot)
{
typename std::iterator_traits<IT1>::value_type piv(*pivot);
std::swap(*pivot, *(last1-1));
std::swap(first2[(pivot-first1)], *(last2-1));
std::swap(first3[(pivot-first1)], *(last3-1));
IT1 store1=first1;
for(IT1 it=first1; it!=last1-1; ++it){
if(*it<=piv){
std::swap(*store1, *it);
std::swap(first2[(store1-first1)], first2[(it-first1)]);
std::swap(first3[(store1-first1)], first3[(it-first1)]);
++store1;
}
}
std::swap(*(last1-1), *store1);
std::swap(*(last2-1), first2[store1-first1]);
std::swap(*(last3-1), first3[store1-first1]);
return store1;
}
/**
* \brief Sort the first array using Quicksort, and apply the resulting permutation to the second array.
*
* All of the input argument iterators are random access iterators.
*
* @param first1 An iterator pointing to the beginning of the first array.
* @param last1 An iterator pointing to the end (exclusive) of the first array.
* @param first2 An iterator pointing to the beginning of the second array.
* @param last2 An iterator pointing to the end of the second array.
*/
template<class IT1, class IT2>
void quicksort2(
const IT1& first1,
const IT1& last1,
const IT2& first2,
const IT2& last2)
{
typedef typename std::iterator_traits<IT1>::difference_type DT;
DT DT1 = Teuchos::OrdinalTraits<DT>::one();
if(last1-first1 > DT1){
IT1 pivot = getPivot(first1, last1);
pivot = partition2(first1, last1, first2, last2, pivot);
quicksort2(first1, pivot, first2, first2+(pivot-first1));
quicksort2(pivot+1, last1, first2+(pivot-first1)+1, last2);
}
}
/**
* \brief Sort the first array using Quicksort, and apply the resulting permutation to the second and third arrays.
*
* All of the input argument iterators are random access iterators.
*
* @param first1 An iterator pointing to the beginning of the first array.
* @param last1 An iterator pointing to the end of the first array.
* @param first2 An iterator pointing to the beginning of the second array.
* @param last2 An iterator pointing to the end of the second array.
* @param first3 An iterator pointing to the beginning of the third array.
* @param last3 An iterator pointing to the end of the third array.
*/
template<class IT1, class IT2, class IT3>
void quicksort3(
const IT1& first1,
const IT1& last1,
const IT2& first2,
const IT2& last2,
const IT3& first3,
const IT3& last3)
{
typedef typename std::iterator_traits<IT1>::difference_type DT;
DT DT1 = Teuchos::OrdinalTraits<DT>::one();
if(last1-first1 > DT1){
IT1 pivot = getPivot(first1, last1);
pivot = partition3(first1, last1, first2, last2, first3, last3, pivot);
quicksort3(first1, pivot, first2, first2+(pivot-first1), first3, first3+(pivot-first1));
quicksort3(pivot+1, last1, first2+(pivot-first1)+1, last2, first3+(pivot-first1)+1, last3);
}
}
/**
* \brief Sort the first array using shell sort, and apply the resulting
* permutation to the second and third arrays.
*
* All of the input argument iterators are random access iterators.
*/
template<class IT1, class IT2, class IT3>
void sh_sort3(
const IT1& first1,
const IT1& last1,
const IT2& first2,
const IT2& last2,
const IT3& first3,
const IT3& last3)
{
typedef typename std::iterator_traits<IT1>::difference_type DT;
DT n = last1 - first1;
DT m = n / 2;
DT z = Teuchos::OrdinalTraits<DT>::zero();
while (m > z)
{
DT max = n - m;
for (DT j = 0; j < max; j++)
{
for (DT k = j; k >= 0; k-=m)
{
if (first1[k+m] >= first1[k])
break;
std::swap(first1[k+m], first1[k]);
std::swap(first2[k+m], first2[k]);
std::swap(first3[k+m], first3[k]);
}
}
m = m/2;
}
}
/**
* \brief Sort the first array using shell sort, and apply the resulting
* permutation to the second array.
*
* All of the input argument iterators are random access iterators.
*/
template<class IT1, class IT2>
void sh_sort2(
const IT1& first1,
const IT1& last1,
const IT2& first2,
const IT2& last2)
{
typedef typename std::iterator_traits<IT1>::difference_type DT;
DT n = last1 - first1;
DT m = n / 2;
DT z = Teuchos::OrdinalTraits<DT>::zero();
while (m > z)
{
DT max = n - m;
for (DT j = 0; j < max; j++)
{
for (DT k = j; k >= 0; k-=m)
{
if (first1[k+m] >= first1[k])
break;
std::swap(first1[k+m], first1[k]);
std::swap(first2[k+m], first2[k]);
}
}
m = m/2;
}
}
} //end namespace SortDetails
/**
* \brief Sort the first array, and apply the resulting permutation to the second array.
*
* Sort the values in the first array (represented by the exclusive
* iterator range first1,last1) in ascending order. Apply the
* permutation resulting from the sort to the second array
* (represented by a starting iterator first2).
*
* @param first1 A random access iterator pointing to the beginning
* of the first array.
* @param last1 A random access iterator pointing to the end
* (exclusive) of the first array.
* @param first2 A random access iterator pointing to the beginning
* of the second array. The second array must have no fewer
* elements than the first array. If the first array has N
* elements, then the permutation will only be applied to the
* first N elements of the second array.
*/
template<class IT1, class IT2>
void sort2(const IT1 &first1, const IT1 &last1, const IT2 &first2) {
// Quicksort uses best-case N log N time whether or not the input
// data is sorted. However, the common case in Tpetra is that the
// input data are sorted, so we first check whether this is the
// case before reverting to Quicksort.
if(SortDetails::isAlreadySorted(first1, last1)){
return;
}
SortDetails::sh_sort2(first1, last1, first2, first2+(last1-first1));
#ifdef HAVE_TPETRA_DEBUG
if(!SortDetails::isAlreadySorted(first1, last1)){
std::cout << "Trouble: sort() did not sort !!" << std::endl;
return;
}
#endif
}
/**
* \brief Sort the first array, and apply the same permutation to the second
* and third arrays.
*
* Sort the values in the first array (represented by the exclusive
* iterator range first1,last1) in ascending order. Apply the
* permutation resulting from the sort to the second array
* (represented by a starting iterator first2) and third array
* (represented by a starting iterator first3).
*
* @param first1 A random access iterator pointing to the beginning of the first array.
* @param last1 A random access iterator pointing to the end (exclusive) of the first array.
* @param first2 A random access iterator pointing to the beginning of the second array.
* @param first3 A random access iterator pointing to the beginning of the third array.
*/
template<class IT1, class IT2, class IT3>
void sort3(const IT1 &first1, const IT1 &last1, const IT2 &first2,
const IT3 &first3)
{
// Quicksort uses best-case N log N time whether or not the input
// data is sorted. However, the common case in Tpetra is that the
// input data are sorted, so we first check whether this is the
// case before reverting to Quicksort.
if(SortDetails::isAlreadySorted(first1, last1)){
return;
}
SortDetails::sh_sort3(first1, last1, first2, first2+(last1-first1), first3,
first3+(last1-first1));
#ifdef HAVE_TPETRA_DEBUG
if(!SortDetails::isAlreadySorted(first1, last1)){
std::cout << " Trouble sort did not actually sort... !!!!!!" <<
std::endl;
return;
}
#endif
}
/// \brief Merge values in place, additively, with the same index.
///
/// \tparam IT1 Iterator type for the range of indices
/// \tparam IT2 Iterator type for the range of values
///
/// indBeg, indEnd defines a half-exclusive (does not include the
/// end) range of indices, and valBeg, valEnd its corresponding
/// range of values. The range of values must have the same number
/// of entries as the range of indices. In every nondecreasing
/// subsequence of indices, this method will merge values that have
/// the same index, by adding the values together. When done, it
/// assigns the new end (exclusive) of the index range to
/// indResultOut, and the new end (exclusive) of the value range to
/// valResultOut. (It is legal for the index range not to be
/// sorted, but then only nondecreasing subsequences will get
/// merged.)
///
/// For example, if the indices on input are {0, 1, 1, 3, -1, -1,
/// -1, 0}, and their corresponding values on input are {42.0, -4.0,
/// -3.0, 1.5, 1.0, 2.0, 3.0}, then on exit from this function, the
/// indices are {0, 1, 3, -1, 0}, and the values are {42.0, -7.0,
/// 1.5, 6.0, 100.0}.
///
/// On entry to the function, indResultOut may alias indEnd, and
/// valResultOut may alias valEnd. For example, the following code
/// is legal:
/// \code
/// std::vector<int> ind (...);
/// std::vector<double> val (...);
/// // ... fill ind and val ...
/// std::vector<int>::iterator indEnd = ind.end ();
/// std::vector<int>::iterator valEnd = val.end ();
/// merge2 (indEnd, valEnd, ind.begin (), indEnd, val.begin (), valEnd);
/// \endcode
/// However, the following code is <i>not</i> legal, because the
/// return value of <tt>std::vector::end()</tt> cannot be modified:
/// \code
/// std::vector<int> ind (...);
/// std::vector<double> val (...);
/// // ... fill ind and val ...
/// merge2 (ind.end (), val.end (), ind.begin (), ind.end (),
/// val.begin (), val.end ());
/// \endcode
template<class IT1, class IT2>
void
merge2 (IT1& indResultOut, IT2& valResultOut,
IT1 indBeg, IT1 indEnd,
IT2 valBeg, IT2 valEnd)
{
if (indBeg == indEnd) {
indResultOut = indBeg; // It's allowed for indResultOut to alias indEnd
valResultOut = valBeg; // It's allowed for valResultOut to alias valEnd
}
else {
IT1 indResult = indBeg;
IT2 valResult = valBeg;
if (indBeg != indEnd) {
++indBeg;
++valBeg;
while (indBeg != indEnd) {
if (*indResult == *indBeg) { // adjacent column indices equal
*valResult += *valBeg; // merge entries by adding their values together
} else { // adjacent column indices not equal
*(++indResult) = *indBeg; // shift over the index
*(++valResult) = *valBeg; // shift over the value
}
++indBeg;
++valBeg;
}
++indResult; // exclusive end of merged result
++valResult; // exclusive end of merged result
// mfh 24 Feb 2014: Setting these is technically correct, but
// since the resulting variables aren't used after this point,
// it may result in a build error.
//
// indEnd = indResult;
// valEnd = valResult;
}
indResultOut = indResult;
valResultOut = valResult;
}
}
/// \brief Merge values in place with the same index, using any
/// associative binary function.
///
/// \tparam IT1 Iterator type for the range of indices
/// \tparam IT2 Iterator type for the range of values
/// \tparam BinaryFunction The type of a function that takes two
/// values and returns another value.
///
/// indBeg, indEnd defines a half-exclusive (does not include the
/// end) range of indices, and valBeg, valEnd its corresponding
/// range of values. The range of values must have the same number
/// of entries as the range of indices. In every nondecreasing
/// subsequence of indices, this method will merge values that have
/// the same index, by using the given binary function. When done,
/// it assigns the new end (exclusive) of the index range to
/// indResultOut, and the new end (exclusive) of the value range to
/// valResultOut. (It is legal for the index range not to be
/// sorted, but then only nondecreasing subsequences will get
/// merged.)
///
/// For example, if the indices on input are {0, 1, 1, 3, -1, -1,
/// -1, 0}, their corresponding values on input are {42.0, -4.0,
/// -3.0, 1.5, 1.0, 2.0, 3.0}, and the binary function is an
/// instance of <tt>std::plus<double></tt>, then on exit from this
/// function, the indices are {0, 1, 3, -1, 0}, and the values are
/// {42.0, -7.0, 1.5, 6.0, 100.0}.
///
/// On entry to the function, indResultOut may alias indEnd, and
/// valResultOut may alias valEnd. For example, the following code
/// is legal:
/// \code
/// std::vector<int> ind (...);
/// std::vector<double> val (...);
/// // ... fill ind and val ...
/// std::vector<int>::iterator indEnd = ind.end ();
/// std::vector<int>::iterator valEnd = val.end ();
/// merge2 (indEnd, valEnd, ind.begin (), indEnd,
/// val.begin (), valEnd, std::plus<double> ());
/// \endcode
/// However, the following code is <i>not</i> legal, because the
/// return value of <tt>std::vector::end()</tt> cannot be modified:
/// \code
/// std::vector<int> ind (...);
/// std::vector<double> val (...);
/// // ... fill ind and val ...
/// merge2 (ind.end (), val.end (), ind.begin (), ind.end (),
/// val.begin (), val.end (), std::plus<double> ());
/// \endcode
template<class IT1, class IT2, class BinaryFunction>
void
merge2 (IT1& indResultOut, IT2& valResultOut,
IT1 indBeg, IT1 indEnd,
IT2 valBeg, IT2 valEnd,
BinaryFunction f)
{
if (indBeg == indEnd) {
indResultOut = indBeg; // It's allowed for indResultOut to alias indEnd
valResultOut = valBeg; // It's allowed for valResultOut to alias valEnd
}
else {
IT1 indResult = indBeg;
IT2 valResult = valBeg;
if (indBeg != indEnd) {
++indBeg;
++valBeg;
while (indBeg != indEnd) {
if (*indResult == *indBeg) { // adjacent column indices equal
*valResult = f (*valResult, *valBeg); // merge entries via values
} else { // adjacent column indices not equal
*(++indResult) = *indBeg; // shift over the index
*(++valResult) = *valBeg; // shift over the value
}
++indBeg;
++valBeg;
}
++indResult; // exclusive end of merged result
++valResult; // exclusive end of merged result
indEnd = indResult;
valEnd = valResult;
}
indResultOut = indResult;
valResultOut = valResult;
}
}
/// \brief Merge two sorted (by keys) sequences of unique
/// (key,value) pairs by combining pairs with equal keys.
///
/// \param keyBeg1 [in] Start of first sequence of keys.
/// \param keyEnd1 [in] End (exclusive) of first sequence of keys.
/// \param valBeg1 [in] Start of first sequence of values.
/// \param valEnd1 [in] End (exclusive) of first sequence of values.
///
/// \param keyBeg2 [in] Start of second sequence of keys.
/// \param keyEnd2 [in] End (exclusive) of second sequence of keys.
/// \param valBeg2 [in] Start of second sequence of values.
/// \param valEnd2 [in] End (exclusive) of second sequence of values.
///
/// \param keyOut [in/out] Output sequence of keys.
/// \param valOut [in/out] Output sequence of values.
///
/// \param f [in] Binary associative function to use to combine
/// values whose keys are equal. For example, for simple
/// replacement, use a function like std::project1st (in the SGI
/// extensions to the STL) with both template parameters equal to
/// the value type. For addition, use std::plus with template
/// parameter equal to the value type.
///
/// \return Number of (key,value) pairs in the merged sequence.
///
/// \warning For now, this function requires that the two input
/// sequences be made unique by key. Later, we plan to relax that
/// requirement.
template<class KeyInputIterType, class ValueInputIterType,
class KeyOutputIterType, class ValueOutputIterType,
class BinaryFunction>
void
keyValueMerge (KeyInputIterType keyBeg1, KeyInputIterType keyEnd1,
ValueInputIterType valBeg1, ValueInputIterType valEnd1,
KeyInputIterType keyBeg2, KeyInputIterType keyEnd2,
ValueInputIterType valBeg2, ValueInputIterType valEnd2,
KeyOutputIterType keyOut, ValueOutputIterType valOut,
BinaryFunction f)
{
while (keyBeg1 != keyEnd1 && keyBeg2 != keyEnd2) {
if (*keyBeg1 < *keyBeg2) {
*keyOut++ = *keyBeg1++;
*valOut++ = *valBeg1++;
} else if (*keyBeg1 > *keyBeg2) {
*keyOut++ = *keyBeg2++;
*valOut++ = *valBeg2++;
} else { // *keyBeg1 == *keyBeg2
*keyOut++ = *keyBeg1;
*valOut++ = f (*valBeg1, *valBeg2);
++keyBeg1;
++valBeg1;
++keyBeg2;
++valBeg2;
}
}
// At most one of the two sequences will be nonempty.
std::copy (keyBeg1, keyEnd1, keyOut);
std::copy (valBeg1, valEnd1, valOut);
std::copy (keyBeg2, keyEnd2, keyOut);
std::copy (valBeg2, valEnd2, valOut);
}
template<class KeyInputIterType>
size_t
keyMergeCount (KeyInputIterType keyBeg1, KeyInputIterType keyEnd1,
KeyInputIterType keyBeg2, KeyInputIterType keyEnd2)
{
size_t count = 0;
while (keyBeg1 != keyEnd1 && keyBeg2 != keyEnd2) {
if (*keyBeg1 < *keyBeg2) {
++keyBeg1;
} else if (*keyBeg1 > *keyBeg2) {
++keyBeg2;
} else { // *keyBeg1 == *keyBeg2
++keyBeg1;
++keyBeg2;
}
++count;
}
// At most one of the two sequences will be nonempty.
count += static_cast<size_t> (keyEnd1 - keyBeg1) +
static_cast<size_t> (keyEnd2 - keyBeg2);
return count;
}
namespace Details {
/// \brief Whether the two communicators are congruent.
///
/// Two communicators are <i>congruent</i> when they have the same
/// number of processes, and those processes occur in the same
/// rank order.
///
/// If both communicators are Teuchos::MpiComm instances, this
/// function returns <tt>true</tt> exactly when
/// <tt>MPI_Comm_compare</tt> returns <tt>MPI_IDENT</tt> (the
/// communicators are handles for the same object) or
/// <tt>MPI_CONGRUENT</tt> on their MPI_Comm handles. Any two
/// Teuchos::SerialComm instances are always congruent. An
/// MpiComm instance is congruent to a SerialComm instance if and
/// only if the MpiComm has one process. This function is
/// symmetric in its arguments.
///
/// If either Teuchos::Comm instance is neither an MpiComm nor a
/// SerialComm, this method cannot do any better than to compare
/// their process counts.
bool
congruent (const Teuchos::Comm<int>& comm1,
const Teuchos::Comm<int>& comm2);
/// \brief Get a Teuchos::ArrayView which views the host
/// Kokkos::View of the input 1-D Kokkos::DualView.
///
/// \pre The input DualView must be sync'd to host.
///
/// \param x [in] A specialization of Kokkos::DualView.
///
/// \return Teuchos::ArrayView that views the host version of the
/// DualView's data.
template<class DualViewType>
Teuchos::ArrayView<typename DualViewType::t_dev::value_type>
getArrayViewFromDualView (const DualViewType& x)
{
static_assert (static_cast<int> (DualViewType::t_dev::rank) == 1,
"The input DualView must have rank 1.");
TEUCHOS_TEST_FOR_EXCEPTION
(x.template need_sync<Kokkos::HostSpace> (), std::logic_error, "The "
"input Kokkos::DualView was most recently modified on device, but this "
"function needs the host view of the data to be the most recently "
"modified.");
auto x_host = x.template view<Kokkos::HostSpace> ();
typedef typename DualViewType::t_dev::value_type value_type;
return Teuchos::ArrayView<value_type> (x_host.ptr_on_device (),
x_host.dimension_0 ());
}
/// \brief Get a 1-D Kokkos::DualView which is a deep copy of the
/// input Teuchos::ArrayView (which views host memory).
///
/// \tparam T The type of the entries of the input Teuchos::ArrayView.
/// \tparam DT The Kokkos Device type.
///
/// \param x_av [in] The Teuchos::ArrayView to copy.
/// \param label [in] String label for the Kokkos::DualView.
/// \param leaveOnHost [in] If true, the host version of the
/// returned Kokkos::DualView is most recently updated (and the
/// DualView may need a sync to device). If false, the device
/// version is most recently updated (and the DualView may need
/// a sync to host).
///
/// \return Kokkos::DualView that is a deep copy of the input
/// Teuchos::ArrayView.
template<class T, class DT>
Kokkos::DualView<T*, DT>
getDualViewCopyFromArrayView (const Teuchos::ArrayView<const T>& x_av,
const char label[],
const bool leaveOnHost)
{
using Kokkos::MemoryUnmanaged;
typedef typename DT::memory_space DMS;
typedef Kokkos::HostSpace HMS;
const size_t len = static_cast<size_t> (x_av.size ());
Kokkos::View<const T*, HMS, MemoryUnmanaged> x_in (x_av.getRawPtr (), len);
Kokkos::DualView<T*, DT> x_out (label, len);
if (leaveOnHost) {
x_out.template modify<HMS> ();
Kokkos::deep_copy (x_out.template view<HMS> (), x_in);
}
else {
x_out.template modify<DMS> ();
Kokkos::deep_copy (x_out.template view<DMS> (), x_in);
}
return x_out;
}
} // namespace Details
} // namespace Tpetra
#endif // TPETRA_UTIL_HPP
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