/usr/lib/python2.7/dist-packages/ngs/ReadGroup.py is in python-ngs 1.3.0-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 | # ===========================================================================
#
# PUBLIC DOMAIN NOTICE
# National Center for Biotechnology Information
#
# This software/database is a "United States Government Work" under the
# terms of the United States Copyright Act. It was written as part of
# the author's official duties as a United States Government employee and
# thus cannot be copyrighted. This software/database is freely available
# to the public for use. The National Library of Medicine and the U.S.
# Government have not placed any restriction on its use or reproduction.
#
# Although all reasonable efforts have been taken to ensure the accuracy
# and reliability of the software and data, the NLM and the U.S.
# Government do not and cannot warrant the performance or results that
# may be obtained by using this software or data. The NLM and the U.S.
# Government disclaim all warranties, express or implied, including
# warranties of performance, merchantability or fitness for any particular
# purpose.
#
# Please cite the author in any work or product based on this material.
#
# ===========================================================================
#
#
from ctypes import c_void_p
from . import NGS
from .Refcount import Refcount
from .String import getNGSString, getNGSValue
from .Statistics import Statistics
# Represents an NGS-capable object with a group of Reads
class ReadGroup(Refcount):
def getName(self):
"""
:returns: the simple name of the read group
"""
return getNGSString(self, NGS.lib_manager.PY_NGS_ReadGroupGetName)
def getStatistics(self):
"""
:returns: a collection of statistical data
"""
ret = Statistics()
ret.ref = getNGSValue(self, NGS.lib_manager.PY_NGS_ReadGroupGetStatistics, c_void_p)
return ret
|