This package is 12.9 MB.
It is available at http://ftp.debian.org/debian/pool/main/r/r-bioc-biostrings/r-bioc-biostrings_2.42.1-1_amd64.deb
.
View its full control file here:
debian/control.
GNU R string objects representing biological sequences
This package depends on:
r-base-core (>= 3.3.2-1), r-api-3, r-bioc-biocgenerics (>= 0.15.6), r-bioc-s4vectors (>= 0.11.1), r-bioc-iranges (>= 2.5.27), r-bioc-xvector (>= 0.11.6), libc6 (>= 2.14).
This package does not recommend any other package.
This package suggests:
r-bioc-bsgenome (>= 1.13.14), r-bioc-genomicfeatures (>= 1.3.14), r-bioc-affy (>= 1.41.3), r-cran-runit.
This package does not conflict with any other package.
r-bioc-biostrings 2.42.1-1 is in debian - stretch / main. This package's architecture is: amd64.
| File | Mime Type | Owner | Mode | Size |
|---|---|---|---|---|
/usr/
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root:root | 0o755 | ||
/usr/lib/
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root:root | 0o755 | ||
/usr/lib/R/
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root:root | 0o755 | ||
/usr/lib/R/site-library/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/data/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/data/BLOSUM100.rda
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application/gzip | root:root | 0o644 | 712 bytes |
/usr/lib/R/site-library/Biostrings/data/BLOSUM45.rda
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application/gzip | root:root | 0o644 | 635 bytes |
/usr/lib/R/site-library/Biostrings/data/BLOSUM50.rda
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application/gzip | root:root | 0o644 | 628 bytes |
/usr/lib/R/site-library/Biostrings/data/BLOSUM62.rda
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application/gzip | root:root | 0o644 | 620 bytes |
/usr/lib/R/site-library/Biostrings/data/BLOSUM80.rda
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application/gzip | root:root | 0o644 | 648 bytes |
/usr/lib/R/site-library/Biostrings/data/HNF4alpha.rda
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application/gzip | root:root | 0o644 | 4.4 KB |
/usr/lib/R/site-library/Biostrings/data/PAM120.rda
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application/gzip | root:root | 0o644 | 673 bytes |
/usr/lib/R/site-library/Biostrings/data/PAM250.rda
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application/gzip | root:root | 0o644 | 635 bytes |
/usr/lib/R/site-library/Biostrings/data/PAM30.rda
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application/gzip | root:root | 0o644 | 767 bytes |
/usr/lib/R/site-library/Biostrings/data/PAM40.rda
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application/gzip | root:root | 0o644 | 736 bytes |
/usr/lib/R/site-library/Biostrings/data/PAM70.rda
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application/gzip | root:root | 0o644 | 740 bytes |
/usr/lib/R/site-library/Biostrings/data/phiX174Phage.rda
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application/gzip | root:root | 0o644 | 6.3 KB |
/usr/lib/R/site-library/Biostrings/data/srPhiX174.rda
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application/gzip | root:root | 0o644 | 36.9 KB |
/usr/lib/R/site-library/Biostrings/data/yeastSEQCHR1.rda
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application/gzip | root:root | 0o644 | 64.9 KB |
/usr/lib/R/site-library/Biostrings/DESCRIPTION
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text/plain | root:root | 0o644 | 2.4 KB |
/usr/lib/R/site-library/Biostrings/doc/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.pdf
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application/pdf | root:root | 0o644 | 158.7 KB |
/usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.R
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text/plain | root:root | 0o644 | 3.5 KB |
/usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.Rnw
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text/x-tex | root:root | 0o644 | 8.3 KB |
/usr/lib/R/site-library/Biostrings/doc/BiostringsQuickOverview.pdf
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application/pdf | root:root | 0o644 | 110.9 KB |
/usr/lib/R/site-library/Biostrings/doc/BiostringsQuickOverview.Rnw
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text/x-tex | root:root | 0o644 | 9.3 KB |
/usr/lib/R/site-library/Biostrings/doc/index.html
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text/html | root:root | 0o644 | 3.4 KB |
/usr/lib/R/site-library/Biostrings/doc/matchprobes.pdf
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application/pdf | root:root | 0o644 | 240.0 KB |
/usr/lib/R/site-library/Biostrings/doc/matchprobes.R
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text/plain | root:root | 0o644 | 3.6 KB |
/usr/lib/R/site-library/Biostrings/doc/matchprobes.Rnw
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text/x-tex | root:root | 0o644 | 9.7 KB |
/usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.pdf
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application/pdf | root:root | 0o644 | 153.8 KB |
/usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.R
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text/plain | root:root | 0o644 | 5.1 KB |
/usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.Rnw
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text/x-tex | root:root | 0o644 | 10.3 KB |
/usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.pdf
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application/pdf | root:root | 0o644 | 281.7 KB |
/usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.R
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text/plain | root:root | 0o644 | 24.6 KB |
/usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.Rnw
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text/x-tex | root:root | 0o644 | 52.2 KB |
/usr/lib/R/site-library/Biostrings/extdata/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/extdata/dm3_upstream2000.fa.gz
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application/gzip | root:root | 0o644 | 11.0 MB |
/usr/lib/R/site-library/Biostrings/extdata/fastaEx.fa
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text/plain | root:root | 0o644 | 169 bytes |
/usr/lib/R/site-library/Biostrings/extdata/hg18chr8_gap.txt
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text/plain | root:root | 0o644 | 495 bytes |
/usr/lib/R/site-library/Biostrings/extdata/hg18chrY_gap.txt
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text/plain | root:root | 0o644 | 667 bytes |
/usr/lib/R/site-library/Biostrings/extdata/msx2_mRNA.aln
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text/plain | root:root | 0o644 | 37.0 KB |
/usr/lib/R/site-library/Biostrings/extdata/Phylip.txt
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text/plain | root:root | 0o644 | 6.2 KB |
/usr/lib/R/site-library/Biostrings/extdata/README
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text/plain | root:root | 0o644 | 440 bytes |
/usr/lib/R/site-library/Biostrings/extdata/s_1_sequence.txt
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text/plain | root:root | 0o644 | 31.0 KB |
/usr/lib/R/site-library/Biostrings/extdata/Sc.fa
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text/plain | root:root | 0o644 | 1.6 KB |
/usr/lib/R/site-library/Biostrings/extdata/someORF.fa
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text/plain | root:root | 0o644 | 26.7 KB |
/usr/lib/R/site-library/Biostrings/extdata/someORF.fa.gz
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application/gzip | root:root | 0o644 | 7.9 KB |
/usr/lib/R/site-library/Biostrings/extdata/Sp.fa
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text/plain | root:root | 0o644 | 1.6 KB |
/usr/lib/R/site-library/Biostrings/help/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/help/aliases.rds
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application/gzip | root:root | 0o644 | 6.4 KB |
/usr/lib/R/site-library/Biostrings/help/AnIndex
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text/plain | root:root | 0o644 | 39.8 KB |
/usr/lib/R/site-library/Biostrings/help/Biostrings.rdb
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application/octet-stream | root:root | 0o644 | 380.1 KB |
/usr/lib/R/site-library/Biostrings/help/Biostrings.rdx
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application/gzip | root:root | 0o644 | 1.7 KB |
/usr/lib/R/site-library/Biostrings/help/paths.rds
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application/gzip | root:root | 0o644 | 758 bytes |
/usr/lib/R/site-library/Biostrings/html/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/html/00Index.html
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text/html | root:root | 0o644 | 86.8 KB |
/usr/lib/R/site-library/Biostrings/html/R.css
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text/plain | root:root | 0o644 | 1.3 KB |
/usr/lib/R/site-library/Biostrings/include/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/include/Biostrings_defines.h
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text/x-c | root:root | 0o644 | 6.1 KB |
/usr/lib/R/site-library/Biostrings/include/Biostrings_interface.h
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text/x-c | root:root | 0o644 | 6.5 KB |
/usr/lib/R/site-library/Biostrings/include/_Biostrings_stubs.c
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text/x-c | root:root | 0o644 | 4.0 KB |
/usr/lib/R/site-library/Biostrings/INDEX
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text/plain | root:root | 0o644 | 5.2 KB |
/usr/lib/R/site-library/Biostrings/libs/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/libs/Biostrings.so
|
application/x-sharedlib | root:root | 0o644 | 212.0 KB |
/usr/lib/R/site-library/Biostrings/Meta/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/Meta/data.rds
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application/gzip | root:root | 0o644 | 320 bytes |
/usr/lib/R/site-library/Biostrings/Meta/hsearch.rds
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application/gzip | root:root | 0o644 | 7.7 KB |
/usr/lib/R/site-library/Biostrings/Meta/links.rds
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application/gzip | root:root | 0o644 | 6.1 KB |
/usr/lib/R/site-library/Biostrings/Meta/nsInfo.rds
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application/gzip | root:root | 0o644 | 2.2 KB |
/usr/lib/R/site-library/Biostrings/Meta/package.rds
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application/gzip | root:root | 0o644 | 1.8 KB |
/usr/lib/R/site-library/Biostrings/Meta/Rd.rds
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application/gzip | root:root | 0o644 | 7.5 KB |
/usr/lib/R/site-library/Biostrings/Meta/vignette.rds
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application/gzip | root:root | 0o644 | 455 bytes |
/usr/lib/R/site-library/Biostrings/NAMESPACE
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text/plain | root:root | 0o644 | 10.6 KB |
/usr/lib/R/site-library/Biostrings/NEWS
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text/plain | root:root | 0o644 | 16.9 KB |
/usr/lib/R/site-library/Biostrings/R/
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/usr/lib/R/site-library/Biostrings/R/Biostrings
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text/plain | root:root | 0o644 | 1.0 KB |
/usr/lib/R/site-library/Biostrings/R/Biostrings.rdb
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application/octet-stream | root:root | 0o644 | 833.9 KB |
/usr/lib/R/site-library/Biostrings/R/Biostrings.rdx
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application/gzip | root:root | 0o644 | 15.2 KB |
/usr/lib/R/site-library/Biostrings/unitTests/
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root:root | 0o755 | ||
/usr/lib/R/site-library/Biostrings/unitTests/test_findPalindromes.R
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text/plain | root:root | 0o644 | 5.8 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_matchDNAPattern.R.FIXME
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text/plain | root:root | 0o644 | 8.1 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_matchPDict.R
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text/plain | root:root | 0o644 | 4.3 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_MultipleAlignment.R
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text/plain | root:root | 0o644 | 10.7 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_pairwiseAlignment.R
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text/plain | root:root | 0o644 | 10.1 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_twoWayAlphabetFrequency.R
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text/plain | root:root | 0o644 | 5.3 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_XString.R
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text/plain | root:root | 0o644 | 1.9 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_XStringSetList.R
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text/plain | root:root | 0o644 | 4.3 KB |
/usr/lib/R/site-library/Biostrings/unitTests/test_XStringSet.R
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text/plain | root:root | 0o644 | 3.7 KB |
/usr/share/
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root:root | 0o755 | ||
/usr/share/doc/
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root:root | 0o755 | ||
/usr/share/doc/r-bioc-biostrings/
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root:root | 0o755 | ||
/usr/share/doc/r-bioc-biostrings/changelog.Debian.gz
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application/gzip | root:root | 0o644 | 770 bytes |
/usr/share/doc/r-bioc-biostrings/changelog.gz
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application/gzip | root:root | 0o644 | 1.9 KB |
/usr/share/doc/r-bioc-biostrings/copyright
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text/plain | root:root | 0o644 | 5.2 KB |
/usr/share/doc/r-bioc-biostrings/README.test
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text/plain | root:root | 0o644 | 262 bytes |
/usr/share/doc/r-bioc-biostrings/run-unit-test
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text/x-shellscript | root:root | 0o644 | 295 bytes |