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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 | bibentry(bibtype = "Article",
key = "Obenchain15072014",
author = c(person(given = "Valerie", family = "Obenchain"),
person(given = "Michael", family = "Lawrence"),
person(given = "Vincent", family = "Carey"),
person(given = "Stephanie", family = "Gogarten"),
person(given = "Paul", family = "Shannon"),
person(given = "Martin", family = "Morgan")),
title = "VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants",
volume = "30",
number = "14",
pages = "2076-2078",
year = "2014",
doi = "10.1093/bioinformatics/btu168",
abstract = "Summary: VariantAnnotation is an R / Bioconductor package
for the exploration and annotation of genetic variants. Capabilities
exist for reading, writing and filtering variant call format (VCF)
files. VariantAnnotation allows ready access to additional R /
Bioconductor facilities for advanced statistical analysis, data
transformation, visualization and integration with diverse genomic
resources. Availability and implementation: This package is
implemented in R and available for download at the Bioconductor Web
site
(http://bioconductor.org/packages/2.13/bioc/html/VariantAnnotation.html).
The package contains extensive help pages for individual functions and
a 'vignette' outlining typical work flows; it is made available under
the open source 'Artistic-2.0' license. Version 1.9.38 was used in
this article. Contact: valerie.obenchain@roswellpark.org",
journal = "Bioinformatics")
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