This file is indexed.

/usr/share/avogadro/builder/amino/d-gln.zmat is in avogadro-data 1.0.3-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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N    0.000000    0.000000    0.000000     0   0   0   -0.245274  N 
C    1.477642    0.000000    0.000000     1   0   0    0.088098  CA
C    1.539379  111.148919    0.000000     2   1   0    0.217725  C 
O    1.206287  128.077011  277.173472     3   2   1   -0.287208  O 
C    1.539195  111.168244  123.793826     2   1   3   -0.020719  CB
H    1.112280  109.560237  191.743459     5   2   1    0.028949  CG
H    1.109603  110.183616  307.101345     5   2   1    0.028949  CD
C    1.529476  110.992071   70.144847     5   2   1    0.025606  OE1
H    1.110597  110.418333  302.351956     8   5   2    0.035882  NE2
H    1.112706  110.492315   58.289067     8   5   2    0.035882  HA 
C    1.515188  110.457287  177.758012     8   5   2    0.210543  H  
O    1.218405  124.156058  264.844138    11   8   5   -0.276033  HB1
N    1.395707  116.234833   84.911119    11   8   5   -0.329321  HB2
H    1.008148  119.777853  180.377236    13  11   8    0.144929  HG1
H    1.002020  123.556467  359.805749    13  11   8    0.144929  HG2
H    1.129433  107.831512  243.844307     2   1   3    0.055702  HE21
H    1.015335  112.133752  297.034003     1   2   3    0.141360  HE22