This file is indexed.

/usr/share/ncbi/data/KSnsigl.mat is in ncbi-data 6.1.20120620-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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A  0.69  0.61  0.57  0.71  0.69  0.21  0.26  0.90  0.07  0.26 ;A
B  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00 ;B D N
C  1.22  0.71  0.53  0.53  0.71  0.53  0.31  0.87  0.02 -1.08 ;C
D -2.08 -2.08 -2.08 -1.39 -2.08 -1.39 -1.39 -2.08 -2.08 -2.08 ;D
E -1.99 -1.99 -1.99 -1.99 -1.99 -1.99 -1.99 -1.99 -1.99 -1.29 ;E
F  0.57  0.35  0.75  0.35  0.69  1.33  1.30 -0.19  0.69  0.43 ;F
G  0.31  0.40  0.14 -0.12 -0.29  0.68  0.25 -0.12  1.02  0.02 ;G
H -1.10 -1.10 -1.10 -1.10 -1.10 -1.10 -0.41 -1.10  0.84 -1.10 ;H
I  0.46  0.72  0.40  0.34  0.40 -0.76  0.85  0.03 -0.99 -0.17 ;I
K -2.50 -2.50 -1.80 -2.50 -2.50 -2.50 -2.50 -2.50 -2.50 -1.11 ;K
L  1.04  1.05  1.20  1.08  1.15  1.35  0.73 -1.11  0.38 -0.57 ;L
M  0.29  0.09  0.09 -0.03  0.72  0.38  0.72  0.09 -0.72 -1.42 ;M
N -1.48 -2.17 -1.48 -1.48 -1.08 -2.17 -1.48 -0.57 -0.57  0.39 ;N
P -1.43 -0.74 -0.33 -0.33 -0.51 -1.02 -0.74  0.82  0.65  1.57 ;P
Q -2.05 -2.05 -2.05 -1.36 -1.36 -2.05 -2.05 -2.05  0.51  0.43 ;Q
R -0.93 -1.33 -2.03 -2.03 -1.33 -0.93 -1.33 -2.03 -0.23 -0.42 ;R
S -0.06  0.21  0.11  0.57  0.17  0.00  0.54  1.45  0.83  1.14 ;S
T  0.00 -0.31  0.29  0.13 -0.14  0.00  0.19  0.43  0.55  0.24 ;T
V  0.58  0.71  0.29  0.29  0.02  0.14  0.14 -0.35  0.02 -0.11 ;V
W -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.15 -0.84 -0.84 -0.84 ;W
X  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00 ;X
Y -1.46 -1.46 -1.46 -0.77 -0.36 -0.77 -0.08 -1.46 -1.46  0.84 ;Y
Z  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00  0.00 ;Z E Q